FFCP PHASE1:Mm9::chr1:59030179..59030198,-: Difference between revisions
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{{FFCP|EntrezGene=70827|HGNC=|MCL_coexpression_id=1073|UniProt=G3UZH5|association_with_transcript=74bp_to_ENSMUST00000173590_5end|description=CAGE_peak_2_at_Trak2_5end|id=chr1:59030179..59030198,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.33e-10!34;UBERON:0002791!1.36e-09!29;UBERON:0003528!1.36e-09!29;UBERON:0001893!1.36e-09!29;UBERON:0000477!1.41e-09!154;UBERON:0000955!1.44e-09!50;UBERON:0006238!1.44e-09!50;UBERON:0002616!3.52e-09!49;UBERON:0001049!3.52e-09!52;UBERON:0005068!3.52e-09!52;UBERON:0006241!3.52e-09!52;UBERON:0007135!3.52e-09!52;UBERON:0001017!4.44e-09!73;UBERON:0005743!4.44e-09!73;UBERON:0000073!4.77e-09!75;UBERON:0001016!4.77e-09!75;UBERON:0007811!1.39e-08!86;UBERON:0000025!3.84e-08!114;UBERON:0002021!9.16e-08!10;UBERON:0000411!9.16e-08!10;UBERON:0001950!9.16e-08!10;UBERON:0000153!1.06e-07!94;UBERON:0000956!1.42e-07!21;UBERON:0001869!1.42e-07!21;UBERON:0000203!1.42e-07!21;UBERON:0000033!1.98e-07!63;UBERON:0003080!3.30e-07!40;UBERON:0002780!7.33e-07!39;UBERON:0001890!7.33e-07!39;UBERON:0006240!7.33e-07!39;UBERON:0002619!8.35e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.33e-10,34;UBERON:0000073,2.95e-10,54;UBERON:0010314,1.30e-09,92;UBERON:0003528,1.36e-09,29;UBERON:0002791,1.36e-09,29;UBERON:0001893,1.36e-09,29;UBERON:0001049,3.63e-09,52;UBERON:0005068,3.63e-09,52;UBERON:0006241,3.63e-09,52;UBERON:0007135,3.63e-09,52;UBERON:0001017,4.43e-09,73;UBERON:0001016,4.76e-09,75;UBERON:0002346,3.79e-08,64;UBERON:0003075,3.79e-08,64;UBERON:0007284,3.79e-08,64;UBERON:0000025,3.91e-08,114;UBERON:0000955,4.86e-08,47;UBERON:0006238,4.86e-08,47;UBERON:0002021,9.14e-08,10;UBERON:0000411,9.14e-08,10;UBERON:0001950,9.14e-08,10;UBERON:0002616,1.13e-07,46;UBERON:0000956,1.42e-07,21;UBERON:0001869,1.42e-07,21;UBERON:0000203,1.42e-07,21;UBERON:0003080,3.30e-07,40;UBERON:0002780,7.32e-07,39;UBERON:0001890,7.32e-07,39;UBERON:0006240,7.32e-07,39;UBERON:0002619,8.33e-07,17;UBERON:0004121,8.78e-07,95;UBERON:0000924,8.78e-07,95;UBERON:0006601,8.78e-07,95|phase1_expression=2.88267924788629,2.09385244583617,3.63999391511629,0.90739263392049,2.50447864973174,2.85394762250213,2.56973904655078,6.71441281896197,4.50523910885334,6.08567768437183,4.62288514208863,4.3874687447435,8.21763503669787,6.46910977900581,10.6595123781012,7.08663435864391,17.4890469532037,8.83294063003066,12.2031845909108,8.48779303596061,5.95303031057488,2.18440092641948,2.35079810225042,2.55987876469451,2.98232065387321,2.29692785646008,3.4460959692726,3.01659725760245,2.09025761402011,2.01624103807945,1.99557459589774,3.17515336729816,3.07532393792285,0,2.59966457776147,0.498703936075477,1.02084678131185,20.9265815368454,16.4080422349998,16.2292360631877,12.9410927366823,17.0761371239611,9.22469670759192,4.65818226509636,1.92616169317078,2.75320128242522,0.782391344348039,1.96222640742402,2.41654801007919,3.11087838518853,2.93971485413261,1.43752564364972,9.73139115134871,6.5282592781021,10.0828139742739,5.40244815675489,4.87106847895886,4.12537673821954,6.06949382578793,7.40587370980846,5.70448263155561,0.338844532069132,1.77858959222228,0.899899717281399,0.988866362566974,1.4209602298922,1.49800055259202,0.384218305321555,7.05089363697648,7.2903206699113,4.41682418837902,5.99867067247988,7.95126747425809,5.02212276781312,5.84657373211242,8.27296907949019,31.9336054898227,18.386976684267,19.6616362567992,3.95658863190582,5.39777097254217,5.2091337055676,12.5632349550621,10.6924895906019,21.3917546887534,7.36571463684169,8.11518580554887,5.59198337475902,4.54357159999104,4.91215140694106,4.63783181922684,0,0.679971333707751,0.539703191637817,1.29955283489534,1.34408066129201,3.7919993435573,5.45377032249785,2.59786004602869,3.88673531961374,3.23939865486365,2.56652954828636,0,7.11066703153331,1.08245520505607,1.01343946190039,0,3.88225191044804,12.4290184150642,4.30482203287992,2.94925055502431,2.13125834818499,1.61430848079241,2.26083960828934,5.29149182110672,2.76466500925286,5.43828929015623,5.35017620603673,7.07688441559899,5.01477234836968,7.72945314611377,7.75800405016355,7.45567044872489,10.2473278954042,15.0801628905688,4.08731288333746,5.03223522924865,0.599902730993408,4.44745794755726,9.73639156131348,25.1625331550245,8.67015029578764,21.9018643442268,22.7586757023994,16.8308316093244,27.418773458451,2.95334155165917,5.97153458928446,4.0435641349388,4.41927897361595,1.95180664444056,1.37941262660084,3.24111833649629,3.46621081022145,5.64702942956021,8.32739181851524,3.84177070694888,8.2785078636485,1.29340795759705,2.64748512234947,4.75068035242662,3.06874025398605,3.89266148915837,4.179025998266,4.11564272815887,1.39323986772945,1.40442637462647,2.05878325691772,4.26245249093389,3.52113813310353,5.8631514995274,6.30217215113552,5.91861838963026,9.05115466038058,9.41029388613007,8.8362899005155,8.04820204198858,9.80828875884224,7.40519324610662,12.9692296622485,10.5389452409612,12.7193989060039,14.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70827 | |||
|HGNC= | |||
|MCL_coexpression_id=1073 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UZH5 | |||
|association_with_transcript=74bp_to_ENSMUST00000173590_5end | |||
|cluster_id=chr1:59030179..59030198,- | |||
|description=CAGE_peak_2_at_Trak2_5end | |||
|id=chr1:59030179..59030198,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.33e-10!34;UBERON:0002791!1.36e-09!29;UBERON:0003528!1.36e-09!29;UBERON:0001893!1.36e-09!29;UBERON:0000477!1.41e-09!154;UBERON:0000955!1.44e-09!50;UBERON:0006238!1.44e-09!50;UBERON:0002616!3.52e-09!49;UBERON:0001049!3.52e-09!52;UBERON:0005068!3.52e-09!52;UBERON:0006241!3.52e-09!52;UBERON:0007135!3.52e-09!52;UBERON:0001017!4.44e-09!73;UBERON:0005743!4.44e-09!73;UBERON:0000073!4.77e-09!75;UBERON:0001016!4.77e-09!75;UBERON:0007811!1.39e-08!86;UBERON:0000025!3.84e-08!114;UBERON:0002021!9.16e-08!10;UBERON:0000411!9.16e-08!10;UBERON:0001950!9.16e-08!10;UBERON:0000153!1.06e-07!94;UBERON:0000956!1.42e-07!21;UBERON:0001869!1.42e-07!21;UBERON:0000203!1.42e-07!21;UBERON:0000033!1.98e-07!63;UBERON:0003080!3.30e-07!40;UBERON:0002780!7.33e-07!39;UBERON:0001890!7.33e-07!39;UBERON:0006240!7.33e-07!39;UBERON:0002619!8.35e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.33e-10,34;UBERON:0000073,2.95e-10,54;UBERON:0010314,1.30e-09,92;UBERON:0003528,1.36e-09,29;UBERON:0002791,1.36e-09,29;UBERON:0001893,1.36e-09,29;UBERON:0001049,3.63e-09,52;UBERON:0005068,3.63e-09,52;UBERON:0006241,3.63e-09,52;UBERON:0007135,3.63e-09,52;UBERON:0001017,4.43e-09,73;UBERON:0001016,4.76e-09,75;UBERON:0002346,3.79e-08,64;UBERON:0003075,3.79e-08,64;UBERON:0007284,3.79e-08,64;UBERON:0000025,3.91e-08,114;UBERON:0000955,4.86e-08,47;UBERON:0006238,4.86e-08,47;UBERON:0002021,9.14e-08,10;UBERON:0000411,9.14e-08,10;UBERON:0001950,9.14e-08,10;UBERON:0002616,1.13e-07,46;UBERON:0000956,1.42e-07,21;UBERON:0001869,1.42e-07,21;UBERON:0000203,1.42e-07,21;UBERON:0003080,3.30e-07,40;UBERON:0002780,7.32e-07,39;UBERON:0001890,7.32e-07,39;UBERON:0006240,7.32e-07,39;UBERON:0002619,8.33e-07,17;UBERON:0004121,8.78e-07,95;UBERON:0000924,8.78e-07,95;UBERON:0006601,8.78e-07,95 | |||
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| |||
|short_description=p2@Trak2 | |||
}} |
Revision as of 19:29, 5 August 2015
Short description: | p2@Trak2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Trak2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1073 |
Association with transcript: | 74bp_to_ENSMUST00000173590_5end |
EntrezGene: | 70827 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gray matter | 1.33e-10 | 34 |
regional part of nervous system | 2.95e-10 | 54 |
structure with developmental contribution from neural crest | 1.30e-09 | 92 |
brain grey matter | 1.36e-09 | 29 |
regional part of telencephalon | 1.36e-09 | 29 |
telencephalon | 1.36e-09 | 29 |
neural tube | 3.63e-09 | 52 |
neural rod | 3.63e-09 | 52 |
future spinal cord | 3.63e-09 | 52 |
neural keel | 3.63e-09 | 52 |
central nervous system | 4.43e-09 | 73 |
nervous system | 4.76e-09 | 75 |
neurectoderm | 3.79e-08 | 64 |
neural plate | 3.79e-08 | 64 |
presumptive neural plate | 3.79e-08 | 64 |
tube | 3.91e-08 | 114 |
brain | 4.86e-08 | 47 |
future brain | 4.86e-08 | 47 |
occipital lobe | 9.14e-08 | 10 |
visual cortex | 9.14e-08 | 10 |
neocortex | 9.14e-08 | 10 |
regional part of brain | 1.13e-07 | 46 |
cerebral cortex | 1.42e-07 | 21 |
cerebral hemisphere | 1.42e-07 | 21 |
pallium | 1.42e-07 | 21 |
anterior neural tube | 3.30e-07 | 40 |
regional part of forebrain | 7.32e-07 | 39 |
forebrain | 7.32e-07 | 39 |
future forebrain | 7.32e-07 | 39 |
regional part of cerebral cortex | 8.33e-07 | 17 |
ectoderm-derived structure | 8.78e-07 | 95 |
ectoderm | 8.78e-07 | 95 |
presumptive ectoderm | 8.78e-07 | 95 |