FFCP PHASE1:Mm9::chr4:86221572..86221593,+: Difference between revisions
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{{FFCP|EntrezGene=68441|HGNC=|MCL_coexpression_id=13|UniProt=Q80X95|association_with_transcript=0bp_to_ENSMUST00000091064,NM_178376,uc008tlw.2_5end|description=CAGE_peak_2_at_Rraga_5end|id=chr4:86221572..86221593,+|ontology_enrichment_celltype=CL:0000117!4.05e-14!23;CL:0000337!4.05e-14!23;CL:0000055!1.36e-12!50;CL:0000393!4.19e-12!39;CL:0000211!4.19e-12!39;CL:0000221!8.96e-12!44;CL:0000133!8.96e-12!44;CL:0000540!1.82e-11!33;CL:0000047!1.82e-11!33;CL:0000031!1.82e-11!33;CL:0000404!1.82e-11!33;CL:0002319!1.90e-11!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.05e-14,23;CL:0000337,4.05e-14,23;CL:0000393,4.19e-12,39;CL:0000211,4.19e-12,39;CL:0000221,8.96e-12,44;CL:0000133,8.96e-12,44;CL:0000540,1.82e-11,33;CL:0000047,1.82e-11,33;CL:0000031,1.82e-11,33;CL:0000404,1.82e-11,33;CL:0002319,1.90e-11,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.17e-30!102;UBERON:0000924!2.17e-30!102;UBERON:0006601!2.17e-30!102;UBERON:0000033!1.49e-28!63;UBERON:0001017!9.85e-28!73;UBERON:0005743!9.85e-28!73;UBERON:0000073!1.26e-27!75;UBERON:0001016!1.26e-27!75;UBERON:0002346!1.41e-26!71;UBERON:0003075!1.41e-26!71;UBERON:0007284!1.41e-26!71;UBERON:0001049!1.41e-25!52;UBERON:0005068!1.41e-25!52;UBERON:0006241!1.41e-25!52;UBERON:0007135!1.41e-25!52;UBERON:0000955!1.06e-24!50;UBERON:0006238!1.06e-24!50;UBERON:0002616!2.94e-24!49;UBERON:0003056!2.02e-22!49;UBERON:0003080!4.40e-20!40;UBERON:0002780!2.39e-19!39;UBERON:0001890!2.39e-19!39;UBERON:0006240!2.39e-19!39;UBERON:0002020!4.66e-19!34;UBERON:0004111!6.00e-19!122;UBERON:0000153!4.69e-18!94;UBERON:0000025!8.88e-18!114;UBERON:0007811!5.79e-17!86;UBERON:0002791!1.69e-16!29;UBERON:0003528!1.69e-16!29;UBERON:0001893!1.69e-16!29;UBERON:0000475!1.09e-12!200;UBERON:0000956!2.42e-11!21;UBERON:0001869!2.42e-11!21;UBERON:0000203!2.42e-11!21;UBERON:0000483!3.16e-10!181;UBERON:0000119!3.57e-10!183;UBERON:0000477!1.56e-09!154;UBERON:0002619!1.92e-09!17;UBERON:0000468!6.03e-09!333|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.99e-32,92;UBERON:0004121,2.38e-30,95;UBERON:0000924,2.38e-30,95;UBERON:0006601,2.38e-30,95;UBERON:0001017,9.85e-28,73;UBERON:0001016,1.26e-27,75;UBERON:0002346,3.86e-27,64;UBERON:0003075,3.86e-27,64;UBERON:0007284,3.86e-27,64;UBERON:0000073,4.47e-27,54;UBERON:0010371,8.18e-27,73;UBERON:0001049,1.41e-25,52;UBERON:0005068,1.41e-25,52;UBERON:0006241,1.41e-25,52;UBERON:0007135,1.41e-25,52;UBERON:0000955,1.56e-22,47;UBERON:0006238,1.56e-22,47;UBERON:0003056,2.02e-22,49;UBERON:0002616,4.22e-22,46;UBERON:0003080,4.40e-20,40;UBERON:0002780,2.39e-19,39;UBERON:0001890,2.39e-19,39;UBERON:0006240,2.39e-19,39;UBERON:0002020,4.66e-19,34;UBERON:0004111,6.00e-19,122;UBERON:0000025,8.88e-18,114;UBERON:0003528,1.69e-16,29;UBERON:0002791,1.69e-16,29;UBERON:0001893,1.69e-16,29;UBERON:0000956,2.42e-11,21;UBERON:0001869,2.42e-11,21;UBERON:0000203,2.42e-11,21;UBERON:0000483,1.26e-09,174;UBERON:0000119,1.43e-09,176;UBERON:0002619,1.92e-09,17;UBERON:0000922,6.56e-07,320|phase1_expression=23.0614339830903,8.72438519098403,6.82498859084304,2.41971369045464,2.00358291978539,8.89760141133016,5.37309073369709,10.4589891987677,7.180224829735,6.55380673701582,17.1217968225505,13.0826340752352,9.41604014621631,11.8891747289836,3.66420737997229,5.06188168474565,6.99561878128147,9.93705820878449,8.91243818437302,10.1853516431527,15.0526623567394,5.16312946244604,3.91799683708403,7.83962871687693,9.40578052375397,8.6134794617253,7.32295393470427,10.1271479362368,9.88121781173144,10.5852654499171,9.5344119581781,2.54012269383853,1.84519436275371,0,9.53210345179206,9.47537478543406,6.53341940039581,14.2300754450549,12.5013655123808,12.5645698553712,14.7057872007754,12.9778642142105,9.71020706062307,26.1865381389201,22.1001710058542,19.4559557291382,12.5182615095686,19.6222640742402,21.7489320907127,28.1923353657711,17.358316281545,24.4379359420452,3.18786951509699,3.62681071005672,4.03312558970957,14.663787854049,14.6132054368766,22.17389996793,45.5212036934095,46.5512061759389,37.3960528068646,17.958760199664,11.5608323494448,8.09909745553259,6.92206453796882,8.5257613793532,14.3808053048834,13.4476406862544,29.8626083448416,28.351247049655,28.8145197051393,28.2794474559766,31.1424642741775,36.8697305637012,31.4373144939815,25.7381260250806,66.0695285996332,41.1153228634304,41.7809770456982,45.2369966914565,40.2545631850602,37.5057626800867,55.8365998002762,48.3975844627245,44.3114918552749,32.4091444021034,30.8946547334053,37.2798891650601,19.6888102666279,14.2830248601825,11.5945795480671,24.0918685554788,7.47968467078526,18.3499085156858,12.3457519315057,9.85659151614138,18.2577746171277,12.7822741933543,12.7295142255406,12.7202246823722,22.6757905840456,10.2661181931454,7.64415719119937,14.2213340630666,17.9687564039308,15.9616715249312,13.6491600153991,11.9893073705013,10.0985774622397,20.6334573300106,13.7053408145247,17.354532263792,15.681853813412,16.2780451796832,14.4634109776917,19.4783216560997,10.8765785803125,13.5923395504717,8.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68441 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80X95 | |||
|association_with_transcript=0bp_to_ENSMUST00000091064,NM_178376,uc008tlw.2_5end | |||
|cluster_id=chr4:86221572..86221593,+ | |||
|description=CAGE_peak_2_at_Rraga_5end | |||
|id=chr4:86221572..86221593,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.05e-14!23;CL:0000337!4.05e-14!23;CL:0000055!1.36e-12!50;CL:0000393!4.19e-12!39;CL:0000211!4.19e-12!39;CL:0000221!8.96e-12!44;CL:0000133!8.96e-12!44;CL:0000540!1.82e-11!33;CL:0000047!1.82e-11!33;CL:0000031!1.82e-11!33;CL:0000404!1.82e-11!33;CL:0002319!1.90e-11!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.05e-14,23;CL:0000337,4.05e-14,23;CL:0000393,4.19e-12,39;CL:0000211,4.19e-12,39;CL:0000221,8.96e-12,44;CL:0000133,8.96e-12,44;CL:0000540,1.82e-11,33;CL:0000047,1.82e-11,33;CL:0000031,1.82e-11,33;CL:0000404,1.82e-11,33;CL:0002319,1.90e-11,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.17e-30!102;UBERON:0000924!2.17e-30!102;UBERON:0006601!2.17e-30!102;UBERON:0000033!1.49e-28!63;UBERON:0001017!9.85e-28!73;UBERON:0005743!9.85e-28!73;UBERON:0000073!1.26e-27!75;UBERON:0001016!1.26e-27!75;UBERON:0002346!1.41e-26!71;UBERON:0003075!1.41e-26!71;UBERON:0007284!1.41e-26!71;UBERON:0001049!1.41e-25!52;UBERON:0005068!1.41e-25!52;UBERON:0006241!1.41e-25!52;UBERON:0007135!1.41e-25!52;UBERON:0000955!1.06e-24!50;UBERON:0006238!1.06e-24!50;UBERON:0002616!2.94e-24!49;UBERON:0003056!2.02e-22!49;UBERON:0003080!4.40e-20!40;UBERON:0002780!2.39e-19!39;UBERON:0001890!2.39e-19!39;UBERON:0006240!2.39e-19!39;UBERON:0002020!4.66e-19!34;UBERON:0004111!6.00e-19!122;UBERON:0000153!4.69e-18!94;UBERON:0000025!8.88e-18!114;UBERON:0007811!5.79e-17!86;UBERON:0002791!1.69e-16!29;UBERON:0003528!1.69e-16!29;UBERON:0001893!1.69e-16!29;UBERON:0000475!1.09e-12!200;UBERON:0000956!2.42e-11!21;UBERON:0001869!2.42e-11!21;UBERON:0000203!2.42e-11!21;UBERON:0000483!3.16e-10!181;UBERON:0000119!3.57e-10!183;UBERON:0000477!1.56e-09!154;UBERON:0002619!1.92e-09!17;UBERON:0000468!6.03e-09!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.99e-32,92;UBERON:0004121,2.38e-30,95;UBERON:0000924,2.38e-30,95;UBERON:0006601,2.38e-30,95;UBERON:0001017,9.85e-28,73;UBERON:0001016,1.26e-27,75;UBERON:0002346,3.86e-27,64;UBERON:0003075,3.86e-27,64;UBERON:0007284,3.86e-27,64;UBERON:0000073,4.47e-27,54;UBERON:0010371,8.18e-27,73;UBERON:0001049,1.41e-25,52;UBERON:0005068,1.41e-25,52;UBERON:0006241,1.41e-25,52;UBERON:0007135,1.41e-25,52;UBERON:0000955,1.56e-22,47;UBERON:0006238,1.56e-22,47;UBERON:0003056,2.02e-22,49;UBERON:0002616,4.22e-22,46;UBERON:0003080,4.40e-20,40;UBERON:0002780,2.39e-19,39;UBERON:0001890,2.39e-19,39;UBERON:0006240,2.39e-19,39;UBERON:0002020,4.66e-19,34;UBERON:0004111,6.00e-19,122;UBERON:0000025,8.88e-18,114;UBERON:0003528,1.69e-16,29;UBERON:0002791,1.69e-16,29;UBERON:0001893,1.69e-16,29;UBERON:0000956,2.42e-11,21;UBERON:0001869,2.42e-11,21;UBERON:0000203,2.42e-11,21;UBERON:0000483,1.26e-09,174;UBERON:0000119,1.43e-09,176;UBERON:0002619,1.92e-09,17;UBERON:0000922,6.56e-07,320 | |||
|phase1_expression=23.0614339830903,8.72438519098403,6.82498859084304,2.41971369045464,2.00358291978539,8.89760141133016,5.37309073369709,10.4589891987677,7.180224829735,6.55380673701582,17.1217968225505,13.0826340752352,9.41604014621631,11.8891747289836,3.66420737997229,5.06188168474565,6.99561878128147,9.93705820878449,8.91243818437302,10.1853516431527,15.0526623567394,5.16312946244604,3.91799683708403,7.83962871687693,9.40578052375397,8.6134794617253,7.32295393470427,10.1271479362368,9.88121781173144,10.5852654499171,9.5344119581781,2.54012269383853,1.84519436275371,0,9.53210345179206,9.47537478543406,6.53341940039581,14.2300754450549,12.5013655123808,12.5645698553712,14.7057872007754,12.9778642142105,9.71020706062307,26.1865381389201,22.1001710058542,19.4559557291382,12.5182615095686,19.6222640742402,21.7489320907127,28.1923353657711,17.358316281545,24.4379359420452,3.18786951509699,3.62681071005672,4.03312558970957,14.663787854049,14.6132054368766,22.17389996793,45.5212036934095,46.5512061759389,37.3960528068646,17.958760199664,11.5608323494448,8.09909745553259,6.92206453796882,8.5257613793532,14.3808053048834,13.4476406862544,29.8626083448416,28.351247049655,28.8145197051393,28.2794474559766,31.1424642741775,36.8697305637012,31.4373144939815,25.7381260250806,66.0695285996332,41.1153228634304,41.7809770456982,45.2369966914565,40.2545631850602,37.5057626800867,55.8365998002762,48.3975844627245,44.3114918552749,32.4091444021034,30.8946547334053,37.2798891650601,19.6888102666279,14.2830248601825,11.5945795480671,24.0918685554788,7.47968467078526,18.3499085156858,12.3457519315057,9.85659151614138,18.2577746171277,12.7822741933543,12.7295142255406,12.7202246823722,22.6757905840456,10.2661181931454,7.64415719119937,14.2213340630666,17.9687564039308,15.9616715249312,13.6491600153991,11.9893073705013,10.0985774622397,20.6334573300106,13.7053408145247,17.354532263792,15.681853813412,16.2780451796832,14.4634109776917,19.4783216560997,10.8765785803125,13.5923395504717,8.84610551949874,17.6325866442676,12.1462835153216,9.21262980956922,5.59175283654366,31.9131068742586,32.4642395560855,10.7291963187608,5.63131085177825,3.59941638596045,5.33694953706872,52.7263050704976,37.972550033946,40.0837383240037,40.3272422846081,43.9830586608169,40.5186686891142,39.5868681885329,17.6182099461047,12.5651040316194,14.9106427475868,19.5710925974421,19.6481868873683,26.2088399054159,19.2666478891724,21.8521985861787,19.5945117555824,21.5231050078548,21.6450983732974,22.5071932542944,18.3232793992916,16.2631228944325,20.0584281546902,23.8923348346057,28.360819421011,15.6713474934975,20.9897779136102,15.723707078661,7.02213187313235,4.37491442095016,6.53576048609863,14.9130556225561,17.8239805585633,16.9258337773354,11.3637473080901,17.9055450890137,20.8260602397961,21.6256568617879,22.534965717568,23.4698338158011,23.6966183875412,29.8784784623953,23.1856795301147,28.5089975479398,26.5655639502171,30.4648570586044,35.1184214102093,26.9610084433725,6.27795687669216,9.25576983322405,14.2903127858607,12.0763069367428,9.53619213783491,9.88249270654378,12.2307924114679,11.0330863145284,10.4396393539793,9.38784041926862,11.8127548136127,5.17286827306992,11.5028811400281,3.59527763461689,11.0230405436094,8.96135729644652,18.587454293402,15.3093006897037,13.5249282807697,14.6628956048626,14.1585315632367,14.307707257625,15.4297150583188,16.5323365737154,19.7818397080132,21.4711065223933,17.4907049981418,6.00642380577939,8.05891879964132,7.19558759631532,5.47722327748958,7.95884627182976,7.89340140522401,6.04161888646702,8.43103179230184,7.96228098245436,18.6898668485561,10.0478055870496,13.7296576170407,25.0053089167641,21.3482922091076,14.473305640901,17.3667998756608,15.5382957651798,12.711268162478,15.6165478913173,14.3161051455986,15.5780819420889,15.9489239393629,14.6350235893349,14.5024332577696,15.5025282754142,15.9454768657487,16.2224681568581,18.3046080777849,17.6471851469444,4.52373851817817,4.35124547054968,9.83528546038072,14.6246475541508,47.5229746363864,48.0567915028033,24.754176751878,27.5193310652767,17.0374438484779,11.7131623288992,15.9413314322271,15.2940030689633,13.590719119026,11.889214293131,19.02610297872,15.4895604692995,17.7879500075936,26.0270266301664,14.0520684356186,14.9575107080494,15.6371480979433,14.5173708215831,7.96470830039777,12.1390318077491,16.0231485191318,17.5402724172985,12.1073776081117,12.604841065701,11.8877014857382,12.3601468022352,14.9728898921583,14.2216541071117,16.8669773719998,9.28219889233682,31.3204437293485,24.3082476942269,20.568030721458,18.2186479776853,18.6207245324387,17.658512942605,23.5305099461033,19.1812917942198,11.7335854031855,9.53244318887191,12.1290618930229,15.1695352706162,18.5684090700291,20.2651427758604,18.2639686324799,15.2651036762907,8.16146342563582,43.3895206704593,5.29699730473343,9.90656966223468,8.70414278637645,6.40452753815949,6.28793447516716,8.46479240864134,9.00885678967433,5.318155188299,5.38979897837253,21.9574242143476,11.3880957689209,12.809126428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| |||
|short_description=p2@Rraga | |||
}} |
Revision as of 18:53, 5 August 2015
Short description: | p2@Rraga |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rraga_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000091064, NM_178376, uc008tlw.2_5end |
EntrezGene: | 68441 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.05e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.05e-14 | 23 |
electrically responsive cell | 4.19e-12 | 39 |
electrically active cell | 4.19e-12 | 39 |
ectodermal cell | 8.96e-12 | 44 |
neurectodermal cell | 8.96e-12 | 44 |
neuron | 1.82e-11 | 33 |
neuronal stem cell | 1.82e-11 | 33 |
neuroblast | 1.82e-11 | 33 |
electrically signaling cell | 1.82e-11 | 33 |
neural cell | 1.90e-11 | 43 |