FFCP PHASE1:Mm9::chr4:84851024..84851035,+: Difference between revisions
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{{FFCP|EntrezGene=20404|HGNC=|MCL_coexpression_id=95|UniProt=A2ALV3|association_with_transcript=0bp_to_ENSMUST00000107188_5end|description=CAGE_peak_5_at_Sh3gl2_5end|id=chr4:84851024..84851035,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.02e-08!52;UBERON:0005068!3.02e-08!52;UBERON:0006241!3.02e-08!52;UBERON:0007135!3.02e-08!52;UBERON:0000955!4.74e-08!50;UBERON:0006238!4.74e-08!50;UBERON:0000033!1.39e-07!63;UBERON:0004121!1.93e-07!102;UBERON:0000924!1.93e-07!102;UBERON:0006601!1.93e-07!102;UBERON:0002616!1.95e-07!49;UBERON:0002346!4.90e-07!71;UBERON:0003075!4.90e-07!71;UBERON:0007284!4.90e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0001255,3.06e-23,1;UBERON:0001556,3.06e-23,1;UBERON:0002037,1.08e-22,4;UBERON:0002680,1.08e-22,4;UBERON:0001895,1.08e-22,4;UBERON:0010092,1.08e-22,4;UBERON:0006215,1.08e-22,4;UBERON:0004733,1.58e-15,6;UBERON:0004732,1.58e-15,6;UBERON:0002028,1.58e-15,6;UBERON:0007277,1.58e-15,6;UBERON:0000162,1.13e-08,3;UBERON:0001353,1.13e-08,3;UBERON:0000163,1.13e-08,3;UBERON:0006866,1.13e-08,3;UBERON:0001046,1.13e-08,3;UBERON:0000164,1.13e-08,3;UBERON:0000931,1.13e-08,3;UBERON:0003076,2.66e-08,12;UBERON:0003057,2.66e-08,12|phase1_expression=0,0.697950815278722,0.454999239389536,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0.255374676170375,0.46081959976873,0,0.274462930807229,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.04946557908083,1.46612694769419,0,0,0,0,0.748953197024114,0,0,0.869121600961382,0.255715457330331,0.41557608911912,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.205809224758569,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0.397912944082302,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0.314578033277133,0.724752362478018,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.113962949352,0,0.183151624267265,0.214368379079066,0.501572104035363,0.564751842617067,0.920650473014354,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p5@Sh3gl2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20404 | |||
|HGNC= | |||
|MCL_coexpression_id=95 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2ALV3 | |||
|association_with_transcript=0bp_to_ENSMUST00000107188_5end | |||
|cluster_id=chr4:84851024..84851035,+ | |||
|description=CAGE_peak_5_at_Sh3gl2_5end | |||
|id=chr4:84851024..84851035,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.02e-08!52;UBERON:0005068!3.02e-08!52;UBERON:0006241!3.02e-08!52;UBERON:0007135!3.02e-08!52;UBERON:0000955!4.74e-08!50;UBERON:0006238!4.74e-08!50;UBERON:0000033!1.39e-07!63;UBERON:0004121!1.93e-07!102;UBERON:0000924!1.93e-07!102;UBERON:0006601!1.93e-07!102;UBERON:0002616!1.95e-07!49;UBERON:0002346!4.90e-07!71;UBERON:0003075!4.90e-07!71;UBERON:0007284!4.90e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,3.06e-23,1;UBERON:0001556,3.06e-23,1;UBERON:0002037,1.08e-22,4;UBERON:0002680,1.08e-22,4;UBERON:0001895,1.08e-22,4;UBERON:0010092,1.08e-22,4;UBERON:0006215,1.08e-22,4;UBERON:0004733,1.58e-15,6;UBERON:0004732,1.58e-15,6;UBERON:0002028,1.58e-15,6;UBERON:0007277,1.58e-15,6;UBERON:0000162,1.13e-08,3;UBERON:0001353,1.13e-08,3;UBERON:0000163,1.13e-08,3;UBERON:0006866,1.13e-08,3;UBERON:0001046,1.13e-08,3;UBERON:0000164,1.13e-08,3;UBERON:0000931,1.13e-08,3;UBERON:0003076,2.66e-08,12;UBERON:0003057,2.66e-08,12 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0.255374676170375,0.46081959976873,0,0.274462930807229,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.04946557908083,1.46612694769419,0,0,0,0,0.748953197024114,0,0,0.869121600961382,0.255715457330331,0.41557608911912,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.205809224758569,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0.397912944082302,0,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0.314578033277133,0.724752362478018,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.113962949352,0,0.183151624267265,0.214368379079066,0.501572104035363,0.564751842617067,0.920650473014354,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p5@Sh3gl2 | |||
}} |
Revision as of 18:46, 5 August 2015
Short description: | p5@Sh3gl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Sh3gl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:95 |
Association with transcript: | 0bp_to_ENSMUST00000107188_5end |
EntrezGene: | 20404 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urinary bladder | 3.06e-23 | 1 |
lower urinary tract | 3.06e-23 | 1 |
cerebellum | 1.08e-22 | 4 |
regional part of metencephalon | 1.08e-22 | 4 |
metencephalon | 1.08e-22 | 4 |
future metencephalon | 1.08e-22 | 4 |
rhombic lip | 1.08e-22 | 4 |
segmental subdivision of hindbrain | 1.58e-15 | 6 |
segmental subdivision of nervous system | 1.58e-15 | 6 |
hindbrain | 1.58e-15 | 6 |
presumptive hindbrain | 1.58e-15 | 6 |
cloaca | 1.13e-08 | 3 |
anal region | 1.13e-08 | 3 |
embryonic cloaca | 1.13e-08 | 3 |
terminal part of digestive tract | 1.13e-08 | 3 |
hindgut | 1.13e-08 | 3 |
primitive urogenital sinus | 1.13e-08 | 3 |
proctodeum | 1.13e-08 | 3 |
posterior neural tube | 2.66e-08 | 12 |
chordal neural plate | 2.66e-08 | 12 |