FFCP PHASE1:Mm9::chr7:99596145..99596156,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=236 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:99596145..99596156,+ | |||
|description=CAGE_peak_at_chr7:99596145..99596156,+ | |description=CAGE_peak_at_chr7:99596145..99596156,+ | ||
|id=chr7:99596145..99596156,+ | |id=chr7:99596145..99596156,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.99e-11!33;CL:0000047!2.99e-11!33;CL:0000031!2.99e-11!33;CL:0000404!2.99e-11!33;CL:0000117!2.74e-09!23;CL:0000337!2.74e-09!23;CL:0000393!1.04e-08!39;CL:0000211!1.04e-08!39;CL:0002319!2.56e-08!43;CL:0000221!5.22e-08!44;CL:0000133!5.22e-08!44 | |ontology_enrichment_celltype=CL:0000540!2.99e-11!33;CL:0000047!2.99e-11!33;CL:0000031!2.99e-11!33;CL:0000404!2.99e-11!33;CL:0000117!2.74e-09!23;CL:0000337!2.74e-09!23;CL:0000393!1.04e-08!39;CL:0000211!1.04e-08!39;CL:0002319!2.56e-08!43;CL:0000221!5.22e-08!44;CL:0000133!5.22e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.47e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.46e-26!73;UBERON:0005743!1.46e-26!73;UBERON:0000073!1.63e-25!75;UBERON:0001016!1.63e-25!75;UBERON:0004121!3.43e-25!102;UBERON:0000924!3.43e-25!102;UBERON:0006601!3.43e-25!102;UBERON:0002346!5.45e-24!71;UBERON:0003075!5.45e-24!71;UBERON:0007284!5.45e-24!71;UBERON:0000033!1.24e-22!63;UBERON:0002020!2.00e-22!34;UBERON:0000955!1.27e-21!50;UBERON:0006238!1.27e-21!50;UBERON:0002616!2.10e-20!49;UBERON:0001049!4.24e-20!52;UBERON:0005068!4.24e-20!52;UBERON:0006241!4.24e-20!52;UBERON:0007135!4.24e-20!52;UBERON:0002791!1.65e-18!29;UBERON:0003528!1.65e-18!29;UBERON:0001893!1.65e-18!29;UBERON:0003056!2.31e-17!49;UBERON:0002021!4.70e-16!10;UBERON:0000411!4.70e-16!10;UBERON:0001950!4.70e-16!10;UBERON:0007811!1.07e-14!86;UBERON:0003080!2.72e-14!40;UBERON:0000956!5.78e-14!21;UBERON:0001869!5.78e-14!21;UBERON:0000203!5.78e-14!21;UBERON:0002780!1.60e-13!39;UBERON:0001890!1.60e-13!39;UBERON:0006240!1.60e-13!39;UBERON:0000153!1.57e-12!94;UBERON:0002619!6.99e-12!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.05e-47,10;UBERON:0000411,7.05e-47,10;UBERON:0001950,7.05e-47,10;UBERON:0002619,2.03e-27,17;UBERON:0000956,4.15e-22,21;UBERON:0001869,4.15e-22,21;UBERON:0000203,4.15e-22,21;UBERON:0002020,5.11e-17,34;UBERON:0003528,7.26e-16,29;UBERON:0002791,7.26e-16,29;UBERON:0001893,7.26e-16,29;UBERON:0000073,1.25e-15,54;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0000955,4.55e-12,47;UBERON:0006238,4.55e-12,47;UBERON:0002780,1.20e-11,39;UBERON:0001890,1.20e-11,39;UBERON:0006240,1.20e-11,39;UBERON:0003080,2.44e-11,40;UBERON:0001049,7.17e-11,52;UBERON:0005068,7.17e-11,52;UBERON:0006241,7.17e-11,52;UBERON:0007135,7.17e-11,52;UBERON:0004684,2.47e-10,3;UBERON:0002275,2.47e-10,3;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002616,8.91e-10,46;UBERON:0003056,3.88e-09,49;UBERON:0002346,1.11e-08,64;UBERON:0003075,1.11e-08,64;UBERON:0007284,1.11e-08,64;UBERON:0010371,1.67e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0,0.220868540951614,0,0,0,1.10115880999389,1.0214987046815,0.768032666281217,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.61119299110724,1.76777151284201,0.711858403995515,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.149790639404823,0.457500602818626,0.376963056338593,0.347648640384553,0,0,0.324482526135515,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.809621403349789,0.584511715822624,0,1.28528526568723,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,2.30162618253588,1.71868654031819,14.0919609521824,2.74033007908257,2.2661816921691,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0,0.220868540951614,0,0,0,1.10115880999389,1.0214987046815,0.768032666281217,0.131886287730194,0.182975287204819,0,0.279182999001381,0,0.61119299110724,1.76777151284201,0.711858403995515,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.149790639404823,0.457500602818626,0.376963056338593,0.347648640384553,0,0,0.324482526135515,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.809621403349789,0.584511715822624,0,1.28528526568723,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,2.30162618253588,1.71868654031819,14.0919609521824,2.74033007908257,2.2661816921691,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:99596145..99596156,+ | |short_description=p@chr7:99596145..99596156,+ | ||
}} | }} |
Latest revision as of 18:43, 5 August 2015
Short description: | p@chr7:99596145..99596156, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:99596145..99596156, + |
Coexpression cluster: | MCL_coexpression_mm9:236 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.47e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 7.05e-47 | 10 |
visual cortex | 7.05e-47 | 10 |
neocortex | 7.05e-47 | 10 |
regional part of cerebral cortex | 2.03e-27 | 17 |
cerebral cortex | 4.15e-22 | 21 |
cerebral hemisphere | 4.15e-22 | 21 |
pallium | 4.15e-22 | 21 |
gray matter | 5.11e-17 | 34 |
brain grey matter | 7.26e-16 | 29 |
regional part of telencephalon | 7.26e-16 | 29 |
telencephalon | 7.26e-16 | 29 |
regional part of nervous system | 1.25e-15 | 54 |
central nervous system | 1.35e-13 | 73 |
nervous system | 3.30e-13 | 75 |
brain | 4.55e-12 | 47 |
future brain | 4.55e-12 | 47 |
regional part of forebrain | 1.20e-11 | 39 |
forebrain | 1.20e-11 | 39 |
future forebrain | 1.20e-11 | 39 |
anterior neural tube | 2.44e-11 | 40 |
neural tube | 7.17e-11 | 52 |
neural rod | 7.17e-11 | 52 |
future spinal cord | 7.17e-11 | 52 |
neural keel | 7.17e-11 | 52 |
raphe nuclei | 2.47e-10 | 3 |
reticular formation | 2.47e-10 | 3 |
ectoderm-derived structure | 3.22e-10 | 95 |
ectoderm | 3.22e-10 | 95 |
presumptive ectoderm | 3.22e-10 | 95 |
regional part of brain | 8.91e-10 | 46 |
pre-chordal neural plate | 3.88e-09 | 49 |
neurectoderm | 1.11e-08 | 64 |
neural plate | 1.11e-08 | 64 |
presumptive neural plate | 1.11e-08 | 64 |
ecto-epithelium | 1.67e-07 | 73 |