FFCP PHASE1:Mm9::chr4:83173669..83173671,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:83173669..83173671,- to FFCP PHASE1:Mm9::chr4:83173669..83173671,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=370 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000082672_5end | |||
|cluster_id=chr4:83173669..83173671,- | |||
|description=CAGE_peak_1_at_ENSMUST00000082672_5end | |||
|id=chr4:83173669..83173671,- | |||
|ontology_enrichment_celltype=CL:0000548!1.58e-31!115;CL:0000004!1.58e-31!115;CL:0000255!1.58e-31!115;CL:0000723!2.18e-30!91;CL:0000048!2.18e-30!91;CL:0002371!2.38e-30!118;CL:0000144!3.13e-29!121;CL:0000012!3.13e-29!121;CL:0000055!7.10e-28!50;CL:0000034!1.17e-27!97;CL:0002319!1.45e-27!43;CL:0000221!1.02e-26!44;CL:0000133!1.02e-26!44;CL:0002321!5.98e-24!70;CL:0000220!5.98e-24!70;CL:0000393!3.36e-23!39;CL:0000211!3.36e-23!39;CL:0000540!2.73e-22!33;CL:0000047!2.73e-22!33;CL:0000031!2.73e-22!33;CL:0000404!2.73e-22!33;CL:0000117!9.78e-22!23;CL:0000337!9.78e-22!23;CL:0000219!2.37e-14!54;CL:0002320!2.84e-10!46;CL:0000134!2.84e-10!46;CL:0002031!1.18e-08!25;CL:0002609!5.38e-07!6;CL:0000988!6.31e-07!32;CL:0002032!6.31e-07!32;CL:0000037!6.31e-07!32;CL:0000566!6.31e-07!32;CL:0000837!6.31e-07!32;CL:0000063!9.87e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.75e-15,23;CL:0000337,1.75e-15,23;CL:0000723,6.65e-14,91;CL:0000048,6.65e-14,91;CL:0002319,3.71e-13,43;CL:0000034,7.87e-13,97;CL:0000221,8.34e-13,44;CL:0000133,8.34e-13,44;CL:0000540,1.59e-12,33;CL:0000047,1.59e-12,33;CL:0000031,1.59e-12,33;CL:0000404,1.59e-12,33;CL:0000393,2.64e-12,39;CL:0000211,2.64e-12,39;CL:0002321,2.17e-11,70;CL:0002609,7.53e-11,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.59e-16!75;UBERON:0001016!1.59e-16!75;UBERON:0001017!3.19e-16!73;UBERON:0005743!3.19e-16!73;UBERON:0002020!3.24e-14!34;UBERON:0004121!2.55e-10!102;UBERON:0000924!2.55e-10!102;UBERON:0006601!2.55e-10!102;UBERON:0002384!2.84e-10!46;UBERON:0002791!6.23e-10!29;UBERON:0003528!6.23e-10!29;UBERON:0001893!6.23e-10!29;UBERON:0001049!2.98e-08!52;UBERON:0005068!2.98e-08!52;UBERON:0006241!2.98e-08!52;UBERON:0007135!2.98e-08!52;UBERON:0000956!7.39e-07!21;UBERON:0001869!7.39e-07!21;UBERON:0000203!7.39e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.32e-10,34;UBERON:0003528,1.74e-09,29;UBERON:0002791,1.74e-09,29;UBERON:0001893,1.74e-09,29;UBERON:0001017,2.22e-09,73;UBERON:0001016,4.67e-09,75 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,0.563154888606667,0.468129052643987,0.171217968225505,0,0.171200729931206,0.174840804837995,0,0,0.699561878128147,0,0.137114433605739,0.42438965179803,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,6.98533740805594,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.659058548203415,0.777719596297134,0.139986421625363,2.87505128729943,0,0,0.336093799142464,1.28629718017973,0.85960031981627,0.515672092277442,1.41621522601718,2.64495489636016,0.633831403506179,0,0.889294796111139,1.3498495759221,1.97773272513395,0,1.49800055259202,0,0,4.59020190327748,1.05162480675691,0.571301968807607,0.220868540951614,0.857435594504678,2.1086003624012,1.83843757322004,0,0.893811366596314,0.614426133024974,1.71452174049252,1.55528994124096,0,0.279182999001381,0.56276261003168,1.22238598221448,2.06240009831567,0.142371680799103,0.186399445825301,0,0.0755715601067855,0,0,0,1.61910957491345,0.649776417447669,1.34408066129201,0,0,0.519572009205738,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459804208866946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63171705145613,0,0,0,0,0,0,0.315508219416257,0,0.430846795465598,0.955875191810208,0.668396022247182,0,0,0,1.58115111178609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.343706364687375,2.05524755931193,0,0,0,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,0.563154888606667,0.468129052643987,0.171217968225505,0,0.171200729931206,0.174840804837995,0,0,0.699561878128147,0,0.137114433605739,0.42438965179803,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,6.98533740805594,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.659058548203415,0.777719596297134,0.139986421625363,2.87505128729943,0,0,0.336093799142464,1.28629718017973,0.85960031981627,0.515672092277442,1.41621522601718,2.64495489636016,0.633831403506179,0,0.889294796111139,1.3498495759221,1.97773272513395,0,1.49800055259202,0,0,4.59020190327748,1.05162480675691,0.571301968807607,0.220868540951614,0.857435594504678,2.1086003624012,1.83843757322004,0,0.893811366596314,0.614426133024974,1.71452174049252,1.55528994124096,0,0.279182999001381,0.56276261003168,1.22238598221448,2.06240009831567,0.142371680799103,0.186399445825301,0,0.0755715601067855,0,0,0,1.61910957491345,0.649776417447669,1.34408066129201,0,0,0.519572009205738,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459804208866946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63171705145613,0,0,0,0,0,0,0.315508219416257,0,0.430846795465598,0.955875191810208,0.668396022247182,0,0,0,1.58115111178609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.343706364687375,2.05524755931193,0,0,0,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000082672 | |||
}} | }} |
Latest revision as of 18:38, 5 August 2015
Short description: | p1@ENSMUST00000082672 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000082672_5end |
Coexpression cluster: | MCL_coexpression_mm9:370 |
Association with transcript: | 0bp_to_ENSMUST00000082672_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.75e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.75e-15 | 23 |
somatic stem cell | 6.65e-14 | 91 |
multi fate stem cell | 6.65e-14 | 91 |
neural cell | 3.71e-13 | 43 |
stem cell | 7.87e-13 | 97 |
ectodermal cell | 8.34e-13 | 44 |
neurectodermal cell | 8.34e-13 | 44 |
neuron | 1.59e-12 | 33 |
neuronal stem cell | 1.59e-12 | 33 |
neuroblast | 1.59e-12 | 33 |
electrically signaling cell | 1.59e-12 | 33 |
electrically responsive cell | 2.64e-12 | 39 |
electrically active cell | 2.64e-12 | 39 |
embryonic cell | 2.17e-11 | 70 |
neuron of cerebral cortex | 7.53e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
gray matter | 7.32e-10 | 34 |
brain grey matter | 1.74e-09 | 29 |
regional part of telencephalon | 1.74e-09 | 29 |
telencephalon | 1.74e-09 | 29 |
central nervous system | 2.22e-09 | 73 |
nervous system | 4.67e-09 | 75 |