FFCP PHASE1:Mm9::chr18:35722088..35722144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:35722088..35722144,+ | |||
|description=CAGE_peak_at_chr18:35722088..35722144,+ | |description=CAGE_peak_at_chr18:35722088..35722144,+ | ||
|id=chr18:35722088..35722144,+ | |id=chr18:35722088..35722144,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!7.45e-11!86;UBERON:0000153!1.83e-10!94;UBERON:0000033!4.72e-10!63;UBERON:0001017!5.77e-10!73;UBERON:0005743!5.77e-10!73;UBERON:0000073!7.49e-10!75;UBERON:0001016!7.49e-10!75;UBERON:0002346!2.57e-09!71;UBERON:0003075!2.57e-09!71;UBERON:0007284!2.57e-09!71;UBERON:0001049!3.55e-09!52;UBERON:0005068!3.55e-09!52;UBERON:0006241!3.55e-09!52;UBERON:0007135!3.55e-09!52;UBERON:0000955!1.59e-08!50;UBERON:0006238!1.59e-08!50;UBERON:0003056!3.00e-08!49;UBERON:0002616!4.42e-08!49;UBERON:0002020!6.25e-08!34;UBERON:0002021!1.00e-07!10;UBERON:0000411!1.00e-07!10;UBERON:0001950!1.00e-07!10;UBERON:0004121!1.14e-07!102;UBERON:0000924!1.14e-07!102;UBERON:0006601!1.14e-07!102;UBERON:0003080!8.02e-07!40 | |ontology_enrichment_uberon=UBERON:0007811!7.45e-11!86;UBERON:0000153!1.83e-10!94;UBERON:0000033!4.72e-10!63;UBERON:0001017!5.77e-10!73;UBERON:0005743!5.77e-10!73;UBERON:0000073!7.49e-10!75;UBERON:0001016!7.49e-10!75;UBERON:0002346!2.57e-09!71;UBERON:0003075!2.57e-09!71;UBERON:0007284!2.57e-09!71;UBERON:0001049!3.55e-09!52;UBERON:0005068!3.55e-09!52;UBERON:0006241!3.55e-09!52;UBERON:0007135!3.55e-09!52;UBERON:0000955!1.59e-08!50;UBERON:0006238!1.59e-08!50;UBERON:0003056!3.00e-08!49;UBERON:0002616!4.42e-08!49;UBERON:0002020!6.25e-08!34;UBERON:0002021!1.00e-07!10;UBERON:0000411!1.00e-07!10;UBERON:0001950!1.00e-07!10;UBERON:0004121!1.14e-07!102;UBERON:0000924!1.14e-07!102;UBERON:0006601!1.14e-07!102;UBERON:0003080!8.02e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.90e-13,64;UBERON:0003075,3.90e-13,64;UBERON:0007284,3.90e-13,64;UBERON:0001017,7.83e-12,73;UBERON:0000073,1.48e-11,54;UBERON:0001016,2.20e-11,75;UBERON:0010371,3.05e-11,73;UBERON:0001049,1.45e-10,52;UBERON:0005068,1.45e-10,52;UBERON:0006241,1.45e-10,52;UBERON:0007135,1.45e-10,52;UBERON:0004121,1.85e-10,95;UBERON:0000924,1.85e-10,95;UBERON:0006601,1.85e-10,95;UBERON:0003056,3.71e-09,49;UBERON:0002020,1.15e-08,34;UBERON:0000955,1.94e-08,47;UBERON:0006238,1.94e-08,47;UBERON:0002021,2.59e-08,10;UBERON:0000411,2.59e-08,10;UBERON:0001950,2.59e-08,10;UBERON:0002616,5.79e-08,46;UBERON:0010314,1.36e-07,92;UBERON:0003080,1.43e-07,40;UBERON:0002780,4.41e-07,39;UBERON:0001890,4.41e-07,39;UBERON:0006240,4.41e-07,39 | |||
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| ||
|short_description=p@chr18:35722088..35722144,+ | |short_description=p@chr18:35722088..35722144,+ | ||
}} | }} |
Latest revision as of 16:38, 5 August 2015
Short description: | p@chr18:35722088..35722144, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:35722088..35722144, + |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.90e-13 | 64 |
neural plate | 3.90e-13 | 64 |
presumptive neural plate | 3.90e-13 | 64 |
central nervous system | 7.83e-12 | 73 |
regional part of nervous system | 1.48e-11 | 54 |
nervous system | 2.20e-11 | 75 |
ecto-epithelium | 3.05e-11 | 73 |
neural tube | 1.45e-10 | 52 |
neural rod | 1.45e-10 | 52 |
future spinal cord | 1.45e-10 | 52 |
neural keel | 1.45e-10 | 52 |
ectoderm-derived structure | 1.85e-10 | 95 |
ectoderm | 1.85e-10 | 95 |
presumptive ectoderm | 1.85e-10 | 95 |
pre-chordal neural plate | 3.71e-09 | 49 |
gray matter | 1.15e-08 | 34 |
brain | 1.94e-08 | 47 |
future brain | 1.94e-08 | 47 |
occipital lobe | 2.59e-08 | 10 |
visual cortex | 2.59e-08 | 10 |
neocortex | 2.59e-08 | 10 |
regional part of brain | 5.79e-08 | 46 |
structure with developmental contribution from neural crest | 1.36e-07 | 92 |
anterior neural tube | 1.43e-07 | 40 |
regional part of forebrain | 4.41e-07 | 39 |
forebrain | 4.41e-07 | 39 |
future forebrain | 4.41e-07 | 39 |