FFCP PHASE1:Mm9::chr11:16899725..16899729,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=296 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:16899725..16899729,- | |||
|description=CAGE_peak_at_chr11:16899725..16899729,- | |description=CAGE_peak_at_chr11:16899725..16899729,- | ||
|id=chr11:16899725..16899729,- | |id=chr11:16899725..16899729,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,4.38e-14,19;CL:0000988,2.39e-12,32;CL:0002032,2.39e-12,32;CL:0000037,2.39e-12,32;CL:0000837,2.39e-12,32;CL:0000557,2.17e-09,7;CL:0000763,7.30e-09,16;CL:0002320,1.23e-07,46;CL:0000134,1.23e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.36e-08,3;DOID:4045,3.36e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!3.52e-09!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.30e-09,16;UBERON:0002204,8.47e-09,32;UBERON:0002384,1.23e-07,46 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.281577444303333,0,0.68487187290202,0.398860794976682,0,0,0.666219523631325,0.607425802169478,0.699561878128147,2.36596624018678,1.50825876966313,1.69755860719212,1.27564935226605,3.67376519443276,0.783599367416806,0.319984845586813,0.68822784320151,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,5.85944283031671,3.1253413780952,3.14114246384279,28.8233429135197,20.4913645487534,4.36959317728038,0,0.506884656097573,0.183546752161682,0,0,0,0,0,0,6.20795642413625,0,1.00828139742739,0.771778308107841,0.286533439938757,2.57836046138721,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.569486723196412,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,1.03575153458869,0.445326417194474,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,0.878342391034642,0.209446706813455,0.255457055208591,7.18890747035522,1.79970819298022,9.27612657633372,0.299581278809645,1.37250180845588,0.251308704225729,0.173824320192276,0.511430914660661,0.20778804455956,0.648965052271031,0.305518091550949,0.746441823660558,0,0,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0.219195732427575,0,0,0.823128545631774,0,6.31991868581911,3.08817488537658,10.5140494776369,0.207125772535502,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0.32833492815819,0.162137619091711,0.438599962275997,0.439100230582101,0.268412837520744,0.420579897128254,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.38992817423824,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0.295220295959204,0.31399745568275,0,0,0.166845105716094,0,0.899448449539415,0.202860121388503,0.482354319504834,0.25462585178142,0,1.29708181420028,0.549122826376163,2.87536413054709,0.744281895337007,0.312037673114561,0,0,0.482443521363367,0.923765950833023,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0.315270288212382,0.8858587585951,0.318909537314974,1.3109065177259,0.345369963731791,0.723245292907558,6.03165135757089,6.52686820582452,0,0,0.160550589987792,0,0,0.757412781613119,0,0,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0.425820255624806,0.35613120733451,0.325773918707152,0.824850614862677,0,0,0,0,0,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,1.6488625294148,0.645857706783622,0,0,0.164140899745061,0.291480836629851,0.18542530201051,2.22132145037209,0.412773735926445,0.925972636848558,1.50694765603753,1.50363650493128,2.97411625168479,6.28920190977265,5.17820373597535,6.08079884739465,2.86401185404534,0,0,0,0.418176592028937,0,0,0.247960367176008,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0.102710957164827,0.25984164595559,0,0,0,0.147689527174577,0,0,0,0.194915761479505,0.192423683280659,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.643105137237198,0,0.564751842617067,0,0.572895513439397,0,0,0,0.675022500231806,0,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.34461281373368,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.25384382367503,0.548783918618318,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0.463735671240843 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.281577444303333,0,0.68487187290202,0.398860794976682,0,0,0.666219523631325,0.607425802169478,0.699561878128147,2.36596624018678,1.50825876966313,1.69755860719212,1.27564935226605,3.67376519443276,0.783599367416806,0.319984845586813,0.68822784320151,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,5.85944283031671,3.1253413780952,3.14114246384279,28.8233429135197,20.4913645487534,4.36959317728038,0,0.506884656097573,0.183546752161682,0,0,0,0,0,0,6.20795642413625,0,1.00828139742739,0.771778308107841,0.286533439938757,2.57836046138721,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.569486723196412,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,1.03575153458869,0.445326417194474,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,0.878342391034642,0.209446706813455,0.255457055208591,7.18890747035522,1.79970819298022,9.27612657633372,0.299581278809645,1.37250180845588,0.251308704225729,0.173824320192276,0.511430914660661,0.20778804455956,0.648965052271031,0.305518091550949,0.746441823660558,0,0,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0.219195732427575,0,0,0.823128545631774,0,6.31991868581911,3.08817488537658,10.5140494776369,0.207125772535502,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0.32833492815819,0.162137619091711,0.438599962275997,0.439100230582101,0.268412837520744,0.420579897128254,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.380451252225118,0.474529061544512,0,0,0.198956472041151,0.38992817423824,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0.295220295959204,0.31399745568275,0,0,0.166845105716094,0,0.899448449539415,0.202860121388503,0.482354319504834,0.25462585178142,0,1.29708181420028,0.549122826376163,2.87536413054709,0.744281895337007,0.312037673114561,0,0,0.482443521363367,0.923765950833023,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0.315270288212382,0.8858587585951,0.318909537314974,1.3109065177259,0.345369963731791,0.723245292907558,6.03165135757089,6.52686820582452,0,0,0.160550589987792,0,0,0.757412781613119,0,0,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0.425820255624806,0.35613120733451,0.325773918707152,0.824850614862677,0,0,0,0,0,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,1.6488625294148,0.645857706783622,0,0,0.164140899745061,0.291480836629851,0.18542530201051,2.22132145037209,0.412773735926445,0.925972636848558,1.50694765603753,1.50363650493128,2.97411625168479,6.28920190977265,5.17820373597535,6.08079884739465,2.86401185404534,0,0,0,0.418176592028937,0,0,0.247960367176008,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0.102710957164827,0.25984164595559,0,0,0,0.147689527174577,0,0,0,0.194915761479505,0.192423683280659,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.643105137237198,0,0.564751842617067,0,0.572895513439397,0,0,0,0.675022500231806,0,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.34461281373368,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.25384382367503,0.548783918618318,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0.463735671240843 | ||
|short_description=p@chr11:16899725..16899729,- | |short_description=p@chr11:16899725..16899729,- | ||
}} | }} |
Latest revision as of 16:33, 5 August 2015
Short description: | p@chr11:16899725..16899729, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:16899725..16899729, - |
Coexpression cluster: | MCL_coexpression_mm9:296 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 4.38e-14 | 19 |
hematopoietic cell | 2.39e-12 | 32 |
hematopoietic oligopotent progenitor cell | 2.39e-12 | 32 |
hematopoietic stem cell | 2.39e-12 | 32 |
hematopoietic multipotent progenitor cell | 2.39e-12 | 32 |
granulocyte monocyte progenitor cell | 2.17e-09 | 7 |
myeloid cell | 7.30e-09 | 16 |
connective tissue cell | 1.23e-07 | 46 |
mesenchymal cell | 1.23e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.30e-09 | 16 |
musculoskeletal system | 8.47e-09 | 32 |
connective tissue | 1.23e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.36e-08 | 3 |
muscle cancer | 3.36e-08 | 3 |