FFCP PHASE1:Mm9::chr1:40599802..40599815,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=180 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:40599802..40599815,+ | |||
|description=CAGE_peak_at_chr1:40599802..40599815,+ | |description=CAGE_peak_at_chr1:40599802..40599815,+ | ||
|id=chr1:40599802..40599815,+ | |id=chr1:40599802..40599815,+ | ||
|ontology_enrichment_celltype=CL:0000068!1.72e-15!3;CL:0002202!1.72e-15!3;CL:0000069!1.72e-15!3;CL:0002632!1.72e-15!3;CL:0002368!1.72e-15!3;CL:0000307!1.72e-15!3;CL:0000377!1.72e-15!3;CL:0000066!2.02e-11!25;CL:0002076!3.34e-11!15;CL:0000223!2.79e-08!20;CL:0000239!1.21e-07!6;CL:0000677!1.21e-07!6;CL:0000212!1.21e-07!6;CL:0000584!1.21e-07!6;CL:0000473!2.19e-07!3;CL:0000627!2.19e-07!3;CL:0000682!2.19e-07!3;CL:0000349!4.17e-07!3;CL:0000351!4.17e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.18e-37,3;CL:0002202,1.18e-37,3;CL:0000069,1.18e-37,3;CL:0002632,1.18e-37,3;CL:0002368,1.18e-37,3;CL:0000307,1.18e-37,3;CL:0000377,1.18e-37,3;CL:0002076,1.21e-13,15;CL:0000066,1.08e-12,25;CL:0000223,2.34e-10,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!1.72e-15!3;UBERON:0001005!1.72e-15!3;UBERON:0007196!1.72e-15!3;UBERON:0001558!1.72e-15!3;UBERON:0001962!3.40e-11!2;UBERON:0001961!3.40e-11!2;UBERON:0001744!3.40e-11!2;UBERON:0000344!5.35e-08!15;UBERON:0002465!9.79e-08!3;UBERON:0000358!4.17e-07!3;UBERON:0000307!4.17e-07!3;UBERON:0004923!7.55e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.18e-37,3;UBERON:0001005,1.18e-37,3;UBERON:0007196,1.18e-37,3;UBERON:0001558,1.18e-37,3;UBERON:0001962,1.78e-26,2;UBERON:0001961,1.78e-26,2;UBERON:0001744,1.78e-26,2;UBERON:0002465,5.00e-18,3;UBERON:0003199,3.62e-14,1;UBERON:0000344,3.05e-08,15;UBERON:0005178,2.93e-07,17;UBERON:0005181,2.93e-07,17;UBERON:0002224,2.93e-07,17;UBERON:0000915,2.93e-07,17;UBERON:0008947,2.93e-07,17;UBERON:0003258,2.93e-07,17 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3190376947626,23.6291559499185,0,1.7230479846363,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,1.36499771816861,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3190376947626,23.6291559499185,0,1.7230479846363,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,1.52015919285059,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:40599802..40599815,+ | |short_description=p@chr1:40599802..40599815,+ | ||
}} | }} |
Latest revision as of 16:11, 5 August 2015
Short description: | p@chr1:40599802..40599815, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:40599802..40599815, + |
Coexpression cluster: | MCL_coexpression_mm9:180 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.18e-37 | 3 |
epithelial cell of tracheobronchial tree | 1.18e-37 | 3 |
branched duct epithelial cell | 1.18e-37 | 3 |
epithelial cell of lower respiratory tract | 1.18e-37 | 3 |
respiratory epithelial cell | 1.18e-37 | 3 |
tracheal epithelial cell | 1.18e-37 | 3 |
tracheoblast | 1.18e-37 | 3 |
endo-epithelial cell | 1.21e-13 | 15 |
epithelial cell | 1.08e-12 | 25 |
endodermal cell | 2.34e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.18e-37 | 3 |
respiratory airway | 1.18e-37 | 3 |
tracheobronchial tree | 1.18e-37 | 3 |
lower respiratory tract | 1.18e-37 | 3 |
gut-associated lymphoid tissue | 1.78e-26 | 2 |
mucosa-associated lymphoid tissue | 1.78e-26 | 2 |
lymphoid tissue | 1.78e-26 | 2 |
lymphoid system | 5.00e-18 | 3 |
egg chamber | 3.62e-14 | 1 |
mucosa | 3.05e-08 | 15 |
thoracic cavity element | 2.93e-07 | 17 |
thoracic segment organ | 2.93e-07 | 17 |
thoracic cavity | 2.93e-07 | 17 |
thoracic segment of trunk | 2.93e-07 | 17 |
respiratory primordium | 2.93e-07 | 17 |
endoderm of foregut | 2.93e-07 | 17 |