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FFCP PHASE1:Mm9::chr2:91803861..91803870,-: Difference between revisions

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{{FFCP|EntrezGene=104418|HGNC=|MCL_coexpression_id=39|UniProt=Q80UP3|association_with_transcript=-47bp_to_ENSMUST00000028667_5end|description=CAGE_peak_9_at_Dgkz_5end|id=chr2:91803861..91803870,-|ontology_enrichment_celltype=CL:0000117!1.77e-07!23;CL:0000337!1.77e-07!23|ontology_enrichment_celltype_v019_2=CL:0002613,1.79e-09,3;CL:0000117,8.09e-09,23;CL:0000337,8.09e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.44e-15!34;UBERON:0001049!2.46e-15!52;UBERON:0005068!2.46e-15!52;UBERON:0006241!2.46e-15!52;UBERON:0007135!2.46e-15!52;UBERON:0000955!1.67e-14!50;UBERON:0006238!1.67e-14!50;UBERON:0000073!2.85e-14!75;UBERON:0001016!2.85e-14!75;UBERON:0001017!2.89e-14!73;UBERON:0005743!2.89e-14!73;UBERON:0002616!7.35e-14!49;UBERON:0002791!2.25e-13!29;UBERON:0003528!2.25e-13!29;UBERON:0001893!2.25e-13!29;UBERON:0003080!5.32e-12!40;UBERON:0007811!1.35e-11!86;UBERON:0002780!1.49e-11!39;UBERON:0001890!1.49e-11!39;UBERON:0006240!1.49e-11!39;UBERON:0000033!4.02e-11!63;UBERON:0000956!1.02e-10!21;UBERON:0001869!1.02e-10!21;UBERON:0000203!1.02e-10!21;UBERON:0002346!1.60e-10!71;UBERON:0003075!1.60e-10!71;UBERON:0007284!1.60e-10!71;UBERON:0000153!1.79e-10!94;UBERON:0004121!2.40e-10!102;UBERON:0000924!2.40e-10!102;UBERON:0006601!2.40e-10!102;UBERON:0000064!3.24e-10!99;UBERON:0003056!2.04e-09!49;UBERON:0002619!1.43e-08!17;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.22e-29,34;UBERON:0001049,1.60e-27,52;UBERON:0005068,1.60e-27,52;UBERON:0006241,1.60e-27,52;UBERON:0007135,1.60e-27,52;UBERON:0000073,3.23e-26,54;UBERON:0003528,1.69e-24,29;UBERON:0002791,1.69e-24,29;UBERON:0001893,1.69e-24,29;UBERON:0000955,4.66e-23,47;UBERON:0006238,4.66e-23,47;UBERON:0001017,3.36e-22,73;UBERON:0002346,1.62e-21,64;UBERON:0003075,1.62e-21,64;UBERON:0007284,1.62e-21,64;UBERON:0001016,1.76e-21,75;UBERON:0002616,4.80e-21,46;UBERON:0002780,1.08e-19,39;UBERON:0001890,1.08e-19,39;UBERON:0006240,1.08e-19,39;UBERON:0000956,1.09e-19,21;UBERON:0001869,1.09e-19,21;UBERON:0000203,1.09e-19,21;UBERON:0002021,1.19e-19,10;UBERON:0000411,1.19e-19,10;UBERON:0001950,1.19e-19,10;UBERON:0003080,4.09e-19,40;UBERON:0010371,2.65e-18,73;UBERON:0002619,2.77e-17,17;UBERON:0004121,5.94e-16,95;UBERON:0000924,5.94e-16,95;UBERON:0006601,5.94e-16,95;UBERON:0003056,5.88e-15,49;UBERON:0010314,1.41e-13,92;UBERON:0000025,3.11e-11,114;UBERON:0004111,3.49e-10,122;UBERON:0003076,5.76e-09,12;UBERON:0003057,5.76e-09,12;UBERON:0002240,4.08e-08,6;UBERON:0005174,4.08e-08,6;UBERON:0001137,4.08e-08,6;UBERON:0011216,1.05e-07,194;UBERON:0000483,2.41e-07,174;UBERON:0000119,3.34e-07,176|phase1_expression=0.160148847104794,0.348975407639361,0.909998478779072,1.81478526784098,1.50268718983904,0.33575854382378,0,0.129123323441576,0.563154888606667,0.234064526321993,0.34243593645101,0.717949430958028,0.342401459862411,0.786783621770977,0,0,0,0.157731082679119,0.137114433605739,0,0.425216450755349,0,0,0.159992422793407,0.45881856213434,0,0,0,0.380046838912748,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0,0.404632921719196,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0.622137673850866,0.945041568321835,1.05162480675691,0.285650984403804,1.54607978666129,0.857435594504678,0.670918297127655,0.919218786610021,1.10115880999389,0.510749352340751,0.768032666281217,1.05509030184155,1.18933936683133,1.56274011167028,0.558365998002762,0,1.22238598221448,1.17851434189467,0.711858403995515,1.1183966749518,0.075726193333184,0.529000920747499,0,0,0.679971333707751,0.539703191637817,0,0.896053774194671,0.561777680527007,0.681721290312231,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0.517875767294343,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,2.92780797011547,5.02672096352292,0.255457055208591,0,0,0,0.748953197024114,0.915001205637253,0.753926112677186,2.43354048269187,2.81287003063364,0.41557608911912,1.1356888414743,0.305518091550949,0.124406970610093,0,0,0.130120442962704,0.459804208866946,0,0,0.408218994907967,0.12811372028485,0.562210347358373,0,0,0.567318240503458,0.351902248327898,0,0,0,0.205782136407943,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,2.52347938276953,1.3377599609307,0.660837565967596,0.264450566663544,0.426576501070468,0.232236671860439,0.128867461322093,0.605050573870028,0,0.380451252225118,0.474529061544512,0.329397909448022,0.754005626400808,0.596869416123452,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,0,0,0,0,0.19395248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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:104418
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=uniprot:Q80UP3
|association_with_transcript=-47bp_to_ENSMUST00000028667_5end
|cluster_id=chr2:91803861..91803870,-
|description=CAGE_peak_9_at_Dgkz_5end
|id=chr2:91803861..91803870,-
|ontology_enrichment_celltype=CL:0000117!1.77e-07!23;CL:0000337!1.77e-07!23
|ontology_enrichment_celltype_v019_2=CL:0002613,1.79e-09,3;CL:0000117,8.09e-09,23;CL:0000337,8.09e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.44e-15!34;UBERON:0001049!2.46e-15!52;UBERON:0005068!2.46e-15!52;UBERON:0006241!2.46e-15!52;UBERON:0007135!2.46e-15!52;UBERON:0000955!1.67e-14!50;UBERON:0006238!1.67e-14!50;UBERON:0000073!2.85e-14!75;UBERON:0001016!2.85e-14!75;UBERON:0001017!2.89e-14!73;UBERON:0005743!2.89e-14!73;UBERON:0002616!7.35e-14!49;UBERON:0002791!2.25e-13!29;UBERON:0003528!2.25e-13!29;UBERON:0001893!2.25e-13!29;UBERON:0003080!5.32e-12!40;UBERON:0007811!1.35e-11!86;UBERON:0002780!1.49e-11!39;UBERON:0001890!1.49e-11!39;UBERON:0006240!1.49e-11!39;UBERON:0000033!4.02e-11!63;UBERON:0000956!1.02e-10!21;UBERON:0001869!1.02e-10!21;UBERON:0000203!1.02e-10!21;UBERON:0002346!1.60e-10!71;UBERON:0003075!1.60e-10!71;UBERON:0007284!1.60e-10!71;UBERON:0000153!1.79e-10!94;UBERON:0004121!2.40e-10!102;UBERON:0000924!2.40e-10!102;UBERON:0006601!2.40e-10!102;UBERON:0000064!3.24e-10!99;UBERON:0003056!2.04e-09!49;UBERON:0002619!1.43e-08!17;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.22e-29,34;UBERON:0001049,1.60e-27,52;UBERON:0005068,1.60e-27,52;UBERON:0006241,1.60e-27,52;UBERON:0007135,1.60e-27,52;UBERON:0000073,3.23e-26,54;UBERON:0003528,1.69e-24,29;UBERON:0002791,1.69e-24,29;UBERON:0001893,1.69e-24,29;UBERON:0000955,4.66e-23,47;UBERON:0006238,4.66e-23,47;UBERON:0001017,3.36e-22,73;UBERON:0002346,1.62e-21,64;UBERON:0003075,1.62e-21,64;UBERON:0007284,1.62e-21,64;UBERON:0001016,1.76e-21,75;UBERON:0002616,4.80e-21,46;UBERON:0002780,1.08e-19,39;UBERON:0001890,1.08e-19,39;UBERON:0006240,1.08e-19,39;UBERON:0000956,1.09e-19,21;UBERON:0001869,1.09e-19,21;UBERON:0000203,1.09e-19,21;UBERON:0002021,1.19e-19,10;UBERON:0000411,1.19e-19,10;UBERON:0001950,1.19e-19,10;UBERON:0003080,4.09e-19,40;UBERON:0010371,2.65e-18,73;UBERON:0002619,2.77e-17,17;UBERON:0004121,5.94e-16,95;UBERON:0000924,5.94e-16,95;UBERON:0006601,5.94e-16,95;UBERON:0003056,5.88e-15,49;UBERON:0010314,1.41e-13,92;UBERON:0000025,3.11e-11,114;UBERON:0004111,3.49e-10,122;UBERON:0003076,5.76e-09,12;UBERON:0003057,5.76e-09,12;UBERON:0002240,4.08e-08,6;UBERON:0005174,4.08e-08,6;UBERON:0001137,4.08e-08,6;UBERON:0011216,1.05e-07,194;UBERON:0000483,2.41e-07,174;UBERON:0000119,3.34e-07,176
|phase1_expression=0.160148847104794,0.348975407639361,0.909998478779072,1.81478526784098,1.50268718983904,0.33575854382378,0,0.129123323441576,0.563154888606667,0.234064526321993,0.34243593645101,0.717949430958028,0.342401459862411,0.786783621770977,0,0,0,0.157731082679119,0.137114433605739,0,0.425216450755349,0,0,0.159992422793407,0.45881856213434,0,0,0,0.380046838912748,0.756090389279792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0,0.404632921719196,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0.622137673850866,0.945041568321835,1.05162480675691,0.285650984403804,1.54607978666129,0.857435594504678,0.670918297127655,0.919218786610021,1.10115880999389,0.510749352340751,0.768032666281217,1.05509030184155,1.18933936683133,1.56274011167028,0.558365998002762,0,1.22238598221448,1.17851434189467,0.711858403995515,1.1183966749518,0.075726193333184,0.529000920747499,0,0,0.679971333707751,0.539703191637817,0,0.896053774194671,0.561777680527007,0.681721290312231,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0.517875767294343,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,2.92780797011547,5.02672096352292,0.255457055208591,0,0,0,0.748953197024114,0.915001205637253,0.753926112677186,2.43354048269187,2.81287003063364,0.41557608911912,1.1356888414743,0.305518091550949,0.124406970610093,0,0,0.130120442962704,0.459804208866946,0,0,0.408218994907967,0.12811372028485,0.562210347358373,0,0,0.567318240503458,0.351902248327898,0,0,0,0.205782136407943,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,2.52347938276953,1.3377599609307,0.660837565967596,0.264450566663544,0.426576501070468,0.232236671860439,0.128867461322093,0.605050573870028,0,0.380451252225118,0.474529061544512,0.329397909448022,0.754005626400808,0.596869416123452,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,0,0,0,0,0.193952487167626,0.210407459670956,0.316182685621286,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.369506380333209,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0,0.44292937929755,0.159454768657487,0.327726629431476,0,0,0,0,0.983528546038072,0,0.481651769963376,0.820481806145422,0.327869890753351,0,0,0.390438744296638,0.430846795465598,0.238968797952552,0.668396022247182,0.283076530788832,0,0,0.395287777946524,1.92792789853084,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.177340233642274,0.535106452806212,0,0.304464949114599,0.23467170806371,0.21183207086382,0.661585194164886,0.16488625294148,0.322928853391811,0.120625849856312,0.596861720015682,0.328281799490123,0.874442509889552,1.48340241608408,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.432021363287205,0,0,0.404593039154462,0.0826534557253359,0,0.259229946583586,0,0.56369293868419,0.149516546043979,0.827292452285488,0,0.258319646955462,0,0.352071715937262,0,0.209718688851422,0,0,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0.596044064343795,0.360586348559907,0.147689527174577,0.302899349844443,0.914481679859998,0.604957110821043,0.584747284438515,0.384847366561318,0.584384510907845,0.453460767230423,0,0,0,0,0,0.73260649706906,0,0,0.564751842617067,1.38097570952153,1.71868654031819,1.54667864109319,2.05524755931193,1.5107877947794,0.675022500231806,2.2516060161211,2.71885445390523,1.55328093525546,0.103787347584177,0,0,0.243106717068294,0,0.551530525350042,0,0.412070114477788,0.64183841918363,0.505394423527595,0,0,0.468207537349412,0.512201219238954,0.287177344778066,0,0.347652977834566,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.470546902076653,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.474540072496697,0.29551344712669,0,0.464810523557898,0,0.499621155875892,0.467863216890817,0.429742108096597,0,0,0.231867835620421
|short_description=p9@Dgkz
}}

Revision as of 16:00, 5 August 2015

Short description:p9@Dgkz
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Dgkz_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: -47bp_to_ENSMUST00000028667_5end
EntrezGene:104418
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Dgkz

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
striatum neuron1.79e-093
CNS neuron (sensu Vertebrata)8.09e-0923
neuroblast (sensu Vertebrata)8.09e-0923

Uber anatomy
Ontology termp-valuen
gray matter3.22e-2934
neural tube1.60e-2752
neural rod1.60e-2752
future spinal cord1.60e-2752
neural keel1.60e-2752
regional part of nervous system3.23e-2654
brain grey matter1.69e-2429
regional part of telencephalon1.69e-2429
telencephalon1.69e-2429
brain4.66e-2347
future brain4.66e-2347
central nervous system3.36e-2273
neurectoderm1.62e-2164
neural plate1.62e-2164
presumptive neural plate1.62e-2164
nervous system1.76e-2175
regional part of brain4.80e-2146
regional part of forebrain1.08e-1939
forebrain1.08e-1939
future forebrain1.08e-1939
cerebral cortex1.09e-1921
cerebral hemisphere1.09e-1921
pallium1.09e-1921
occipital lobe1.19e-1910
visual cortex1.19e-1910
neocortex1.19e-1910
anterior neural tube4.09e-1940
ecto-epithelium2.65e-1873
regional part of cerebral cortex2.77e-1717
ectoderm-derived structure5.94e-1695
ectoderm5.94e-1695
presumptive ectoderm5.94e-1695
pre-chordal neural plate5.88e-1549
structure with developmental contribution from neural crest1.41e-1392
tube3.11e-11114
anatomical conduit3.49e-10122
posterior neural tube5.76e-0912
chordal neural plate5.76e-0912
spinal cord4.08e-086
dorsal region element4.08e-086
dorsum4.08e-086
organ system subdivision1.05e-07194
epithelium2.41e-07174
cell layer3.34e-07176
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