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FFCP PHASE1:Mm9::chr4:59562147..59562175,-: Difference between revisions

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{{FFCP|EntrezGene=230257|HGNC=|MCL_coexpression_id=1162|UniProt=G3UXA6|association_with_transcript=0bp_to_ENSMUST00000102883,ENSMUST00000174586_5end|description=CAGE_peak_1_at_Rod1_5end|id=chr4:59562147..59562175,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.42e-17!130;UBERON:0000925!5.42e-17!130;UBERON:0006595!5.42e-17!130;UBERON:0001007!7.53e-16!128;UBERON:0001555!7.53e-16!128;UBERON:0007026!7.53e-16!128;UBERON:0004921!2.94e-15!126;UBERON:0004185!2.94e-15!126;UBERON:0002405!2.02e-10!70;UBERON:0003104!1.38e-08!131;UBERON:0009142!1.38e-08!131;UBERON:0000077!2.81e-08!97;UBERON:0004923!3.26e-08!24;UBERON:0005409!6.95e-08!59;UBERON:0002193!7.36e-08!48;UBERON:0000926!2.35e-07!193;UBERON:0004120!2.35e-07!193;UBERON:0006603!2.35e-07!193;UBERON:0005057!3.52e-07!51;UBERON:0005911!3.59e-07!69;UBERON:0002390!6.33e-07!45;UBERON:0003061!6.33e-07!45;UBERON:0001041!7.28e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.25e-19,118;UBERON:0000925,4.25e-19,118;UBERON:0006595,4.25e-19,118;UBERON:0001007,6.96e-18,116;UBERON:0001555,6.96e-18,116;UBERON:0007026,6.96e-18,116;UBERON:0004921,2.86e-17,114;UBERON:0005409,1.72e-10,47;UBERON:0001041,2.48e-08,80;UBERON:0000160,2.94e-08,31;UBERON:0004923,3.26e-08,24;UBERON:0002193,7.36e-08,48;UBERON:0002405,7.36e-08,48;UBERON:0005911,3.59e-07,69;UBERON:0002390,6.33e-07,45;UBERON:0003061,6.33e-07,45|phase1_expression=50.7671845322197,243.584834532274,263.899558845931,200.836236307735,241.431741834139,142.025864037459,118.675221422527,172.637883441387,424.759574731579,430.444663906146,102.388344998852,111.042845321508,194.48402920185,191.80036290728,256.161406836245,261.395570200265,260.936580541799,267.354185141106,288.488768306474,205.828981122045,59.0200433648424,296.383489334643,218.624223509289,168.312028778664,174.580462892116,240.028961000078,211.934902110265,193.277695719242,227.268009669823,270.176299102646,169.402110140653,23.4961349180064,37.5189520426588,31.6963362030877,76.2568276143365,86.442015586416,82.8927586425219,585.944283031671,386.760995539281,470.124322088471,571.761006366146,588.78520803418,493.278518679652,38.3985294825511,35.4819259268301,33.9561491499111,33.6428278069657,11.1192829754028,8.12838876117546,16.7209713203884,26.4574336871935,14.3752564364972,205.198127208612,179.164449076802,184.515495729213,80.2649440432155,92.5503011002184,76.3194696570615,14.7691016427506,19.5726662330652,18.3811107016792,33.2067641427749,32.9039074561122,92.2397210213434,90.9757053561617,80.2842529889093,37.4500138148006,23.8215349299364,12.9612015385597,11.2054928815303,13.4607975264884,17.9960120174396,17.8903518170807,16.9037302916637,12.0765293482978,12.8690630125403,14.3150645299205,17.4931653176707,12.9029487935245,17.4089899803856,19.4868680873133,25.5247551572812,9.49222196604695,16.3201156909187,15.7382195210114,33.2930301585245,27.1929910326287,34.11109858603,109.651527946451,103.004036425549,157.396417365011,68.8339101585109,69.3570760381906,64.7643829965381,113.710873053342,141.576496322758,98.4515385123581,56.071576128181,38.1885426766217,33.5672595784823,47.7459193042947,83.4122103193066,107.018200676791,28.4426681261332,96.7714953320127,87.409153588909,100.093840112927,123.090222337147,463.498811728437,101.089096703146,71.8229252811802,96.5155566249488,98.472817328337,96.7639352347837,133.228005184754,65.5979606740906,550.997583079919,113.79969389597,232.652575162817,76.1921863252297,158.564210254563,176.494592141221,145.385573750135,19.0307518057506,13.1951425292477,252.13611349088,266.349021776661,176.371402912062,243.212414617846,20.2217363196511,32.4825428001225,15.9581027183338,19.1206752211504,15.5986428971502,18.0775598766817,19.6311928311987,98.1731467517049,200.9172575353,226.692314315006,108.798439493307,44.6313119362074,37.4740430226561,48.0765886580282,49.4311802501145,45.1081989373304,44.0711197779883,34.8570415362191,60.2778853821907,54.7542702049419,66.1871280587367,67.5652316789564,73.4305703632376,87.0287890076121,132.335823278423,131.700567301084,90.9586599360514,218.388301254416,217.973677326164,224.489164522518,74.7724038853162,77.1590737337806,58.7002320362908,67.9457391129553,62.374261463927,56.9245646554426,53.4828072925938,50.1671260617288,60.601212688561,44.7602791764667,55.160267930576,66.3953550180558,57.7489950330063,74.6470391989572,61.6007462110106,24.814213930567,18.5228302282712,322.488732192187,225.576333364003,74.6508876873319,85.4630952446414,127.965389092839,150.657592893637,179.236703338965,174.627124771329,197.878618664061,229.260944975823,220.923648535437,268.591237255554,227.133161493775,212.121380442396,210.734598627827,213.678586201936,59.5557208992676,113.448773021461,130.740973380773,129.92954716531,124.711449248783,139.079330842502,155.751590937046,122.221202527111,100.793183274163,109.576681562559,98.7187248200206,182.028010336259,177.492772587222,199.902417910135,247.895068336751,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:230257
|HGNC=
|MCL_coexpression_id=1162
|TSSclassifier=NA
|UniProt=uniprot:G3UXA6
|association_with_transcript=0bp_to_ENSMUST00000102883,ENSMUST00000174586_5end
|cluster_id=chr4:59562147..59562175,-
|description=CAGE_peak_1_at_Rod1_5end
|id=chr4:59562147..59562175,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.25e-19,118;UBERON:0000925,4.25e-19,118;UBERON:0006595,4.25e-19,118;UBERON:0001007,6.96e-18,116;UBERON:0001555,6.96e-18,116;UBERON:0007026,6.96e-18,116;UBERON:0004921,2.86e-17,114;UBERON:0005409,1.72e-10,47;UBERON:0001041,2.48e-08,80;UBERON:0000160,2.94e-08,31;UBERON:0004923,3.26e-08,24;UBERON:0002193,7.36e-08,48;UBERON:0002405,7.36e-08,48;UBERON:0005911,3.59e-07,69;UBERON:0002390,6.33e-07,45;UBERON:0003061,6.33e-07,45
|phase1_expression=50.7671845322197,243.584834532274,263.899558845931,200.836236307735,241.431741834139,142.025864037459,118.675221422527,172.637883441387,424.759574731579,430.444663906146,102.388344998852,111.042845321508,194.48402920185,191.80036290728,256.161406836245,261.395570200265,260.936580541799,267.354185141106,288.488768306474,205.828981122045,59.0200433648424,296.383489334643,218.624223509289,168.312028778664,174.580462892116,240.028961000078,211.934902110265,193.277695719242,227.268009669823,270.176299102646,169.402110140653,23.4961349180064,37.5189520426588,31.6963362030877,76.2568276143365,86.442015586416,82.8927586425219,585.944283031671,386.760995539281,470.124322088471,571.761006366146,588.78520803418,493.278518679652,38.3985294825511,35.4819259268301,33.9561491499111,33.6428278069657,11.1192829754028,8.12838876117546,16.7209713203884,26.4574336871935,14.3752564364972,205.198127208612,179.164449076802,184.515495729213,80.2649440432155,92.5503011002184,76.3194696570615,14.7691016427506,19.5726662330652,18.3811107016792,33.2067641427749,32.9039074561122,92.2397210213434,90.9757053561617,80.2842529889093,37.4500138148006,23.8215349299364,12.9612015385597,11.2054928815303,13.4607975264884,17.9960120174396,17.8903518170807,16.9037302916637,12.0765293482978,12.8690630125403,14.3150645299205,17.4931653176707,12.9029487935245,17.4089899803856,19.4868680873133,25.5247551572812,9.49222196604695,16.3201156909187,15.7382195210114,33.2930301585245,27.1929910326287,34.11109858603,109.651527946451,103.004036425549,157.396417365011,68.8339101585109,69.3570760381906,64.7643829965381,113.710873053342,141.576496322758,98.4515385123581,56.071576128181,38.1885426766217,33.5672595784823,47.7459193042947,83.4122103193066,107.018200676791,28.4426681261332,96.7714953320127,87.409153588909,100.093840112927,123.090222337147,463.498811728437,101.089096703146,71.8229252811802,96.5155566249488,98.472817328337,96.7639352347837,133.228005184754,65.5979606740906,550.997583079919,113.79969389597,232.652575162817,76.1921863252297,158.564210254563,176.494592141221,145.385573750135,19.0307518057506,13.1951425292477,252.13611349088,266.349021776661,176.371402912062,243.212414617846,20.2217363196511,32.4825428001225,15.9581027183338,19.1206752211504,15.5986428971502,18.0775598766817,19.6311928311987,98.1731467517049,200.9172575353,226.692314315006,108.798439493307,44.6313119362074,37.4740430226561,48.0765886580282,49.4311802501145,45.1081989373304,44.0711197779883,34.8570415362191,60.2778853821907,54.7542702049419,66.1871280587367,67.5652316789564,73.4305703632376,87.0287890076121,132.335823278423,131.700567301084,90.9586599360514,218.388301254416,217.973677326164,224.489164522518,74.7724038853162,77.1590737337806,58.7002320362908,67.9457391129553,62.374261463927,56.9245646554426,53.4828072925938,50.1671260617288,60.601212688561,44.7602791764667,55.160267930576,66.3953550180558,57.7489950330063,74.6470391989572,61.6007462110106,24.814213930567,18.5228302282712,322.488732192187,225.576333364003,74.6508876873319,85.4630952446414,127.965389092839,150.657592893637,179.236703338965,174.627124771329,197.878618664061,229.260944975823,220.923648535437,268.591237255554,227.133161493775,212.121380442396,210.734598627827,213.678586201936,59.5557208992676,113.448773021461,130.740973380773,129.92954716531,124.711449248783,139.079330842502,155.751590937046,122.221202527111,100.793183274163,109.576681562559,98.7187248200206,182.028010336259,177.492772587222,199.902417910135,247.895068336751,244.553639988951,208.283946757201,237.92470567182,182.56426534869,141.67368920505,119.327611417704,160.392748445125,122.318767860908,94.969658108114,101.897730880446,127.365089639929,154.084160598948,64.0480971784238,88.4899822080201,92.6808168332527,101.620877508921,117.086873951829,146.634882785784,143.228097527624,145.65487315412,153.253565236952,117.358709731911,134.367918066905,120.188747378663,130.039503664779,111.585550115061,169.154667667619,189.821009385348,200.881951309845,17.3394637186815,21.332526959781,98.8527720621353,46.9595924600134,65.3102014191651,75.7451163935479,81.430044342998,60.4591058819957,59.4872459799992,80.9598878056061,71.6514941964563,82.7084077889013,82.6151455908234,35.6666661228206,134.559200777439,47.8996473864917,102.293010474046,139.729694157738,92.921596837974,64.3368685810701,68.9297709879632,83.9292604913747,63.7852088622469,89.7710631996268,139.292850017671,92.3375672872864,93.402313136797,82.485593821248,83.280700774249,86.633856328477,103.153200543398,46.8158844481407,23.2845630808958,49.7261921273294,68.4533301859176,50.8351130165901,59.5667454579678,32.5777495552621,274.331226726477,521.106894324998,118.20322135746,189.124532123878,221.690657853478,193.121985619955,227.881804701988,266.072398486744,201.704738947857,22.0656109392507,300.391008442625,114.338324851625,177.416357220184,283.871264706069,326.425815797808,263.094899187501,200.914504252737,213.565916245902,222.640157798927,101.195085509602,82.4055263278858,85.1908567261496,106.385260709474,116.880357472088,117.260696731697,129.065179490273,138.692498707114,135.851333889711,189.367475979309,94.4435755892127,42.8406633399985,72.3660082852857,49.9684641180435,59.5020636332786,63.9341126214769,63.3585470590418,95.2940777803522,85.9348939970071,78.2250709415803,44.4514782319851,42.3404109199062,198.770994875124,76.4274061643919,92.5425724055093,103.287054267347,119.768859401545,106.095843453195,131.373626325326,129.819094386453,131.963150082229,133.20949803294,144.786401856503,189.555578038818,129.597350689524,141.304174737517,160.9785723668,83.4667184686483,99.761808549737,125.409808423967,132.914440694147,184.491873368512,165.019613464806,290.897890410292,210.660283694853,16.942555278512,19.7939851698086,21.7700295106971,19.9349691518678,17.1270629942661,20.3956352295219,20.925697507186,19.3638117386415,17.2194115413998,20.192652158321,65.1784542828629,57.0605568963474,60.9518972542259,109.154915963664,102.920062850339,82.3618917856063,90.4544182152574,96.4244067878025,104.29874311734,93.2452711408413,103.673033655108,98.0856975207596,84.0900737079544,90.4675403480803,85.4065423369969,103.355731008427,84.3637892878548,79.6715080515102,78.7084070534316,81.6954006745905,95.6605214155309,89.9802337227841,86.5523369508775,93.6030923112196,95.0504742194839,97.0529552517529,90.7322745448952,92.6005384261207,89.9023233659605,123.451299764702,94.3148394087184,83.9258189839801,67.1138910798291,91.5676731409059,111.885834369062,57.4564329257276,98.4852071555169,131.930827185655,109.034349279241,103.016192728814,106.195468714153
|short_description=p1@Rod1
}}

Revision as of 15:43, 5 August 2015

Short description:p1@Rod1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rod1_5end
Coexpression cluster:MCL_coexpression_mm9:1162
Association with transcript: 0bp_to_ENSMUST00000102883, ENSMUST00000174586_5end
EntrezGene:230257
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rod1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G750.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5243.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6263.90
CD326+ enterocyte, pool1.CNhs13542.11848-124I3200.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I4241.43
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7142.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8118.68
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9172.64
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7424.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2430.44
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6102.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1111.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4194.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8191.80
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1256.16
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3261.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5260.94
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2267.35
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4288.49
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6205.83
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A359.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2296.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9218.62
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1168.31
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2174.58
GP2+ M cell, pool1.CNhs13228.11845-124H9240.03
GP2+ M cell, pool2.CNhs13231.11846-124I1211.93
GP2+ M cell, pool3.CNhs13240.11847-124I2193.28
Ileum epithelium, pool1.CNhs13199.10252-104B9227.27
Ileum epithelium, pool2.CNhs13232.10253-104C1270.18
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8169.40
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I323.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G637.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F576.26
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F686.44
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F782.89
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8585.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1386.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3470.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9571.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2588.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4493.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D838.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D935.48
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B333.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B733.64
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.12
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C426.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2205.20
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9179.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1184.52
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C180.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E192.55
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C576.32
Mouse Granule cells, donor1.CNhs12131.11713-123C314.77
Mouse Granule cells, donor2.CNhs12357.11731-123E319.57
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C633.21
Mouse Meningeal cells, donor3.CNhs12109.11639-122D132.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C792.24
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E790.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D280.28
Mouse Microglia, donor1.CNhs12629.11718-123C837.45
Mouse Microglia, donor2.CNhs12634.11736-123E823.82
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.96
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.89
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D633.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.19
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E134.11
Mouse Schwann, donor1.CNhs12507.11728-123D9109.65
Mouse Schwann, donor2.CNhs12573.11746-123F9103.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3157.40
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F768.83
Mouse hepatocyte, donor1.CNhs13078.11714-123C469.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C864.76
Mouse hepatocyte, donor6.CNhs13090.11822-124F4113.71
Mouse hepatocyte, donor8.CNhs13091.11824-124F6141.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A798.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I756.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E338.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I833.57
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G647.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H183.41
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8107.02
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G196.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G287.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3100.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6123.09
accessory axillary lymph node, adult.CNhs10475.1063-29H9463.50
adrenal gland, adult.CNhs10508.49-24D7101.09
adrenal gland, embryo E14.CNhs11038.406-44C571.82
adrenal gland, embryo E16.CNhs11004.1254-43D696.52
adrenal gland, embryo E17.CNhs11043.1263-45I198.47
adrenal gland, embryo E18.CNhs11026.1262-18F596.76
adrenal gland, neonate N00.CNhs11191.1311-23C1133.23
adrenal gland, neonate N25.CNhs11223.1377-27I365.60
amnion, adult pregnant day17.5.CNhs10488.583-22A8551.00
aorta, adult.CNhs10498.46-23H1113.80
bone (os femoris), adult.CNhs10483.56-12G2232.65
bone (os femoris), neonate N02.CNhs11227.1985-43F576.19
bone (os femoris), neonate N16.CNhs11225.1525-43A6158.56
bone (os femoris), neonate N20.CNhs11195.1350-25C3176.49
cecum, adult.CNhs10467.37-13H4145.39
cerebellum, adult.CNhs10494.15-8B219.03
cerebellum, neonate N30.CNhs11135.1395-42I213.20
colon, adult.CNhs10468.36-18H7252.14
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7266.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1176.37
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4243.21
corpora quadrigemina, adult.CNhs10501.16-22A420.22
corpus striatum, adult.CNhs10487.19-21D832.48
corpus striatum, neonate N00.CNhs11226.630-43F115.96
cortex, adult.CNhs10473.12-14D519.12
cortex, neonate N30.CNhs11107.1392-42F215.60
diencephalon, adult.CNhs10482.20-12F218.08
diencephalon, neonate N30.CNhs11201.1388-42B219.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B198.17
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2200.92
epididymis, adult.CNhs10490.58-23B2226.69
eyeball, adult.CNhs10484.31-12G4108.80
eyeball, embryo E12.CNhs11016.345-16C644.63
eyeball, embryo E14.CNhs10521.399-16E237.47
eyeball, embryo E15.CNhs10593.426-16C948.08
eyeball, embryo E17.CNhs11023.1261-18D449.43
eyeball, neonate N00.CNhs11207.633-15C645.11
eyeball, neonate N01.CNhs11140.1532-43E744.07
eyeball, neonate N02.CNhs11205.1551-44G834.86
eyeball, neonate N16.CNhs11188.777-19A260.28
forelimb, embryo E11.CNhs10596.335-25E254.75
forelimb, embryo E12.CNhs10600.359-14H266.19
forelimb, embryo E13.CNhs10589.384-1E267.57
forelimb, embryo E14.CNhs10577.413-26A873.43
forelimb, embryo E15.CNhs11007.437-20E787.03
forelimb, embryo E17.CNhs10598.1517-43C4132.34
forelimb, embryo E18.CNhs11008.1520-43B5131.70
gonad, embryo E13.CNhs11044.1564-45I690.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8218.39
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2217.97
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5224.49
heart, embryo E11.CNhs10586.331-24E974.77
heart, embryo E12.CNhs11015.353-12F577.16
heart, embryo E13.CNhs11013.376-3I958.70
heart, embryo E14.CNhs10597.403-26D467.95
heart, embryo E15.CNhs11017.431-16C862.37
heart, embryo E16.CNhs11021.457-17C656.92
heart, embryo E17.CNhs11025.479-18E553.48
heart, embryo E18.CNhs11030.1283-20G350.17
heart, neonate N00.CNhs11213.639-21E360.60
heart, neonate N03.CNhs11221.1349-25I244.76
heart, neonate N10.CNhs11118.749-24G155.16
heart, neonate N16.CNhs11209.782-15G166.40
heart, neonate N20.CNhs11127.821-26I657.75
heart, neonate N25.CNhs11196.1351-25D374.65
heart, neonate N30.CNhs11202.1390-42D261.60
hippocampus, adult.CNhs10478.13-16E824.81
hippocampus, neonate N00.CNhs11228.627-43G118.52
intestinal mucosa, adult.CNhs10506.860-29I3322.49
intestine, adult.CNhs10496.178-9A3225.58
intestine, embryo E12.CNhs11019.1251-16I574.65
intestine, embryo E13.CNhs11010.381-16D585.46
intestine, embryo E15.CNhs10602.976-16D8127.97
intestine, embryo E16.CNhs10585.463-22H4150.66
intestine, embryo E17.CNhs10582.482-18D3179.24
intestine, embryo E18.CNhs10526.1289-20F7174.63
intestine, neonate N00.CNhs11126.644-26D1197.88
intestine, neonate N01.CNhs11192.1322-23E9229.26
intestine, neonate N06.CNhs11102.688-20B8220.92
intestine, neonate N07.CNhs11095.720-20F2268.59
intestine, neonate N10.CNhs11098.755-23A5227.13
intestine, neonate N20.CNhs11187.827-18D1212.12
intestine, neonate N25.CNhs11121.1352-25E3210.73
intestine, neonate N30.CNhs11131.1384-42G1213.68
kidney, embryo E14.CNhs10606.411-4I959.56
kidney, embryo E15.CNhs10997.434-16F8113.45
kidney, embryo E16.CNhs10584.464-22A5130.74
kidney, embryo E17.CNhs11028.483-18I2129.93
kidney, embryo E18.CNhs11001.1288-20C7124.71
kidney, neonate N00.CNhs11214.646-21G7139.08
kidney, neonate N10.CNhs11206.758-6D5155.75
kidney, neonate N20.CNhs11113.832-19I1122.22
kidney, neonate N25.CNhs11122.1353-25F3100.79
kidney, neonate N30.CNhs11203.1385-42H1109.58
liver, adult pregnant day01.CNhs10466.508-5B298.72
liver, embryo E12.CNhs10601.355-15F8182.03
liver, embryo E13.CNhs10524.378-3H6177.49
liver, embryo E14.CNhs10594.409-16E1199.90
liver, embryo E15.CNhs10520.433-16D7247.90
liver, embryo E16.CNhs10523.462-17F5244.55
liver, embryo E17.CNhs10510.481-18A3208.28
liver, embryo E18.CNhs10579.499-43G4237.92
liver, neonate N00.CNhs11117.641-24F4182.56
liver, neonate N03.CNhs11123.1345-25G2141.67
liver, neonate N06.CNhs11101.684-20A8119.33
liver, neonate N07.CNhs11103.716-20H2160.39
liver, neonate N10.CNhs11115.751-24B9122.32
liver, neonate N20.CNhs11220.823-25A394.97
liver, neonate N25.CNhs11198.1368-26H1101.90
liver, neonate N30.CNhs11106.1382-42D1127.37
lung, adult.CNhs10474.28-22B1154.08
lung, embryo E12.CNhs10522.354-16G264.05
lung, embryo E14.CNhs10604.404-26F888.49
lung, embryo E15.CNhs11020.432-17C592.68
lung, embryo E16.CNhs10998.458-17B6101.62
lung, embryo E17.CNhs10605.480-44A6117.09
lung, embryo E18.CNhs10583.1287-20I6146.63
lung, neonate N00.CNhs11224.640-42C6143.23
lung, neonate N06.CNhs11212.683-20E5145.65
lung, neonate N07.CNhs11111.715-19A3153.25
lung, neonate N10.CNhs11219.750-23E6117.36
lung, neonate N20.CNhs11109.822-18A4134.37
lung, neonate N25.CNhs11119.1359-25C7120.19
lung, neonate N30.CNhs11133.1394-42H2130.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1111.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1169.15
mammary gland, adult lactating day02.CNhs10480.595-22B6189.82
mammary gland, adult pregnant day19.CNhs10476.588-5H2200.88
medulla oblongata, adult.CNhs10477.17-12C217.34
medulla oblongata, neonate N30.CNhs11200.1396-42A321.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C798.85
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C246.96
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E165.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E275.75
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E381.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D760.46
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D859.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D980.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D471.65
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D582.71
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D682.62
olfactory brain, adult.CNhs10489.18-22I935.67
ovary, adult.CNhs10507.91-2I7134.56
ovary, embryo E18.CNhs11040.505-44H747.90
ovary, neonate N00.CNhs11217.1299-22I4102.29
oviduct, adult pregnant day01.CNhs10500.988-6G6139.73
pancreas, adult.CNhs10486.34-16E492.92
pancreas, embryo E14.CNhs11012.405-44F464.34
pancreas, embryo E15.CNhs11042.1556-45F268.93
pancreas, embryo E16.CNhs11003.460-26E583.93
pancreas, embryo E17.CNhs10599.1558-45G363.79
pancreas, embryo E18.CNhs10580.1535-43I789.77
pancreas, neonate N00.CNhs11105.645-26G9139.29
pancreas, neonate N01.CNhs11138.1531-43D792.34
pancreas, neonate N02.CNhs11139.1539-43D893.40
pancreas, neonate N16.CNhs11136.787-43B682.49
pancreas, neonate N25.CNhs11094.1555-45E283.28
pancreas, neonate N30.CNhs11182.1548-44H586.63
pituitary gland, adult.CNhs10493.21-1G8103.15
pituitary gland, embryo E12.CNhs11018.346-16E646.82
pituitary gland, embryo E13.CNhs11009.370-44C723.28
pituitary gland, embryo E14.CNhs11037.398-44A549.73
pituitary gland, embryo E15.CNhs10592.427-16B968.45
pituitary gland, embryo E16.CNhs11036.449-43F650.84
pituitary gland, embryo E17.CNhs11039.1265-44F559.57
pituitary gland, neonate N00.CNhs11190.1308-22E932.58
placenta, adult pregnant day10.CNhs10472.539-13I7274.33
placenta, adult pregnant day17.CNhs10464.577-18G3521.11
prostate, adult.CNhs10470.859-1F8118.20
skin, adult.CNhs10492.30-1C3189.12
skin, neonate N00.CNhs11124.650-25G4221.69
skin, neonate N03.CNhs11215.662-22H3193.12
skin, neonate N06.CNhs11097.693-20I5227.88
skin, neonate N10.CNhs11108.762-6C4266.07
small intestine, neonate N16.CNhs11114.790-21I1201.70
spinal cord, adult.CNhs10505.24-13C922.07
spleen, adult.CNhs10465.25-2G2300.39
spleen, embryo E16.CNhs11035.461-43C1114.34
spleen, embryo E18.CNhs11011.1271-21F2177.42
spleen, neonate N10.CNhs11116.752-24D1283.87
spleen, neonate N20.CNhs11112.824-19H1326.43
spleen, neonate N25.CNhs11099.1354-25G3263.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6200.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9213.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3222.64
stomach, adult.CNhs10503.33-1H6101.20
stomach, embryo E12.CNhs10588.356-43E382.41
stomach, embryo E15.CNhs10603.1252-16G885.19
stomach, embryo E16.CNhs11022.459-17D4106.39
stomach, embryo E17.CNhs11006.1035-18D5116.88
stomach, embryo E18.CNhs10999.1286-20C6117.26
stomach, neonate N03.CNhs11193.1340-24B8129.07
stomach, neonate N07.CNhs11210.718-18A9138.69
stomach, neonate N25.CNhs11104.1355-25E4135.85
stomach, neonate N30.CNhs11134.1386-42I1189.37
submandibular gland, adult.CNhs10469.59-29C194.44
testis, adult.CNhs10504.57-7G542.84
testis, embryo E13.CNhs11031.389-23F572.37
testis, embryo E15.CNhs11034.443-27C549.97
testis, embryo E16.CNhs11033.470-26G559.50
testis, embryo E17.CNhs11029.486-18I563.93
testis, embryo E18.CNhs11027.503-18G563.36
testis, neonate N00.CNhs11189.1300-22B795.29
testis, neonate N07.CNhs11222.726-26I485.93
testis, neonate N10.CNhs11204.763-44D978.23
testis, neonate N20.CNhs11110.839-18H344.45
testis, neonate N30.CNhs11130.1391-42E242.34
thymus, adult.CNhs10471.38-12B5198.77
thymus, embryo E14.CNhs11041.402-44I476.43
thymus, embryo E15.CNhs11005.430-45I292.54
thymus, embryo E16.CNhs11002.456-26C5103.29
thymus, embryo E17.CNhs10581.478-18C1119.77
thymus, embryo E18.CNhs10595.1273-19G4106.10
thymus, neonate N02.CNhs11181.1541-43F8131.37
thymus, neonate N03.CNhs11137.2104-43C7129.82
thymus, neonate N06.CNhs11197.681-26C4131.96
thymus, neonate N07.CNhs11211.713-19D3133.21
thymus, neonate N10.CNhs11194.748-24E4144.79
thymus, neonate N20.CNhs11186.820-7A2189.56
thymus, neonate N25.CNhs11125.1362-25G7129.60
thymus, neonate N30.CNhs11132.1393-42G2141.30
tongue, adult.CNhs10499.32-1B4160.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H383.47
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F799.76
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5125.41
urinary bladder, adult.CNhs10481.879-12E4132.91
uterus, adult pregnant day19.CNhs10497.590-15F5184.49
uterus, adult.CNhs10509.92-27E5165.02
vagina, adult.CNhs10502.89-27D5290.90
vesicular gland, adult.CNhs10491.51-27F8210.66
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.77
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.93
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.19
whole body, embryo E11.CNhs11014.324-5I865.18
whole body, embryo E12.CNhs10587.857-27C957.06
whole body, embryo E13.CNhs10512.372-23H260.95
whole body, embryo E14.5.CNhs10578.420-27D2109.15
whole body, embryo E14.CNhs10519.395-14B1102.92
whole body, embryo E16.CNhs10514.453-14F282.36
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G590.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G596.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5104.30
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G593.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5103.67
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G598.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G584.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G590.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G585.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5103.36
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G584.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G579.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G578.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G581.70
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G595.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G589.98
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G586.55
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G593.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G595.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G597.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G590.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G592.60
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G589.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5123.45
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G594.31
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G583.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G567.11
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G591.57
whole body, embryo E17.5.CNhs10513.490-9F9111.89
whole body, embryo E17.CNhs10517.475-3I557.46
whole body, embryo E18.CNhs10516.493-3B398.49
whole body, neonate N00.CNhs10525.657-19C2131.93
whole body, neonate N01.CNhs10576.659-23C6109.03
whole body, neonate N06.CNhs10515.692-21D1103.02
whole body, neonate N10.CNhs10518.761-6B4106.20





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure4.25e-19118
endoderm4.25e-19118
presumptive endoderm4.25e-19118
digestive system6.96e-18116
digestive tract6.96e-18116
primitive gut6.96e-18116
subdivision of digestive tract2.86e-17114
gastrointestinal system1.72e-1047
foregut2.48e-0880
intestine2.94e-0831
organ component layer3.26e-0824
hemolymphoid system7.36e-0848
immune system7.36e-0848
endo-epithelium3.59e-0769
hematopoietic system6.33e-0745
blood island6.33e-0745
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