FFCP PHASE1:Mm9::chr13:114660879..114660896,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=137 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:114660879..114660896,+ | |||
|description=CAGE_peak_at_chr13:114660879..114660896,+ | |description=CAGE_peak_at_chr13:114660879..114660896,+ | ||
|id=chr13:114660879..114660896,+ | |id=chr13:114660879..114660896,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.85e-14!32;CL:0002032!1.85e-14!32;CL:0000037!1.85e-14!32;CL:0000566!1.85e-14!32;CL:0000837!1.85e-14!32;CL:0000791!4.69e-13!9;CL:0000789!4.69e-13!9;CL:0002420!4.69e-13!9;CL:0002419!4.69e-13!9;CL:0000790!4.69e-13!9;CL:0000838!1.89e-12!12;CL:0002320!3.53e-12!46;CL:0000134!3.53e-12!46;CL:0000542!2.19e-11!13;CL:0000051!2.19e-11!13;CL:0000624!6.80e-11!8;CL:0000084!1.72e-10!11;CL:0000827!1.72e-10!11;CL:0002031!6.95e-10!25;CL:0000034!7.47e-10!97;CL:0000219!8.51e-10!54;CL:0000738!2.21e-08!17;CL:0002087!2.21e-08!17;CL:0000063!2.44e-08!66;CL:0000723!1.32e-07!91;CL:0000048!1.32e-07!91;CL:0000144!7.94e-07!121;CL:0000012!7.94e-07!121;CL:0000893!8.58e-07!6;CL:0002489!8.58e-07!6;CL:0000898!8.58e-07!6;CL:0000809!8.58e-07!6;CL:0000810!8.58e-07!6;CL:0000895!8.58e-07!6;CL:0000808!8.58e-07!6;CL:0000894!8.58e-07!6;CL:0000806!8.58e-07!6;CL:0000807!8.58e-07!6;CL:0000805!8.58e-07!6;CL:0002425!8.58e-07!6;CL:0002436!8.58e-07!6;CL:0002427!8.58e-07!6;CL:0002428!8.58e-07!6;CL:0002429!8.58e-07!6;CL:0002433!8.58e-07!6;CL:0002431!8.58e-07!6;CL:0002432!8.58e-07!6 | |ontology_enrichment_celltype=CL:0000988!1.85e-14!32;CL:0002032!1.85e-14!32;CL:0000037!1.85e-14!32;CL:0000566!1.85e-14!32;CL:0000837!1.85e-14!32;CL:0000791!4.69e-13!9;CL:0000789!4.69e-13!9;CL:0002420!4.69e-13!9;CL:0002419!4.69e-13!9;CL:0000790!4.69e-13!9;CL:0000838!1.89e-12!12;CL:0002320!3.53e-12!46;CL:0000134!3.53e-12!46;CL:0000542!2.19e-11!13;CL:0000051!2.19e-11!13;CL:0000624!6.80e-11!8;CL:0000084!1.72e-10!11;CL:0000827!1.72e-10!11;CL:0002031!6.95e-10!25;CL:0000034!7.47e-10!97;CL:0000219!8.51e-10!54;CL:0000738!2.21e-08!17;CL:0002087!2.21e-08!17;CL:0000063!2.44e-08!66;CL:0000723!1.32e-07!91;CL:0000048!1.32e-07!91;CL:0000144!7.94e-07!121;CL:0000012!7.94e-07!121;CL:0000893!8.58e-07!6;CL:0002489!8.58e-07!6;CL:0000898!8.58e-07!6;CL:0000809!8.58e-07!6;CL:0000810!8.58e-07!6;CL:0000895!8.58e-07!6;CL:0000808!8.58e-07!6;CL:0000894!8.58e-07!6;CL:0000806!8.58e-07!6;CL:0000807!8.58e-07!6;CL:0000805!8.58e-07!6;CL:0002425!8.58e-07!6;CL:0002436!8.58e-07!6;CL:0002427!8.58e-07!6;CL:0002428!8.58e-07!6;CL:0002429!8.58e-07!6;CL:0002433!8.58e-07!6;CL:0002431!8.58e-07!6;CL:0002432!8.58e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.28e-08,12;CL:0000213,4.65e-08,1;CL:0002078,4.65e-08,1;CL:0000115,4.65e-08,1;CL:0002262,4.65e-08,1;CL:1000398,4.65e-08,1;CL:0000542,9.68e-08,13;CL:0000051,9.68e-08,13;CL:0000815,1.78e-07,1;CL:0000792,1.78e-07,1;CL:0000625,2.37e-07,1;CL:0000945,3.16e-07,1;CL:0000236,3.16e-07,1;CL:0000826,3.16e-07,1 | |||
|ontology_enrichment_disease=DOID:0060100!9.79e-09!3;DOID:4045!9.79e-09!3 | |ontology_enrichment_disease=DOID:0060100!9.79e-09!3;DOID:4045!9.79e-09!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.21e-09,3;DOID:4045,1.21e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.53e-12!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.65e-08,1;UBERON:0001281,4.65e-08,1;UBERON:0000353,4.65e-08,1;UBERON:0003497,4.65e-08,1;UBERON:0003909,4.65e-08,1;UBERON:0003928,4.65e-08,1;UBERON:0003835,4.65e-08,1;UBERON:0003513,4.65e-08,1;UBERON:0001280,4.65e-08,1;UBERON:0004647,4.65e-08,1;UBERON:0002294,4.65e-08,1;UBERON:0001173,4.65e-08,1;UBERON:0004912,4.65e-08,1;UBERON:0005171,4.65e-08,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.67860320474049,0.422366166455,0.468129052643987,0,0,1.54080656938085,0.611942816932982,0,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,3.906676722619,0.523523743973798,9.41170380849623,5.46436387966757,2.42755176515577,0,0,0,0,0,0,0,0,0,1.00669563634642,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.232411367294,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07833612055328,2.99951365496704,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03974115992626,1.6794174278839,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,1.67860320474049,0.422366166455,0.468129052643987,0,0,1.54080656938085,0.611942816932982,0,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,3.906676722619,0.523523743973798,9.41170380849623,5.46436387966757,2.42755176515577,0,0,0,0,0,0,0,0,0,1.00669563634642,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.232411367294,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07833612055328,2.99951365496704,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03974115992626,1.6794174278839,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:114660879..114660896,+ | |short_description=p@chr13:114660879..114660896,+ | ||
}} | }} |
Latest revision as of 15:25, 5 August 2015
Short description: | p@chr13:114660879..114660896, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:114660879..114660896, + |
Coexpression cluster: | MCL_coexpression_mm9:137 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.28e-08 | 12 |
lining cell | 4.65e-08 | 1 |
meso-epithelial cell | 4.65e-08 | 1 |
endothelial cell | 4.65e-08 | 1 |
endothelial cell of sinusoid | 4.65e-08 | 1 |
endothelial cell of hepatic sinusoid | 4.65e-08 | 1 |
lymphocyte | 9.68e-08 | 13 |
common lymphoid progenitor | 9.68e-08 | 13 |
regulatory T cell | 1.78e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.78e-07 | 1 |
CD8-positive, alpha-beta T cell | 2.37e-07 | 1 |
lymphocyte of B lineage | 3.16e-07 | 1 |
B cell | 3.16e-07 | 1 |
pro-B cell | 3.16e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 4.65e-08 | 1 |
hepatic sinusoid | 4.65e-08 | 1 |
parenchyma | 4.65e-08 | 1 |
abdomen blood vessel | 4.65e-08 | 1 |
sinusoid | 4.65e-08 | 1 |
digestive system duct | 4.65e-08 | 1 |
abdominal segment blood vessel | 4.65e-08 | 1 |
trunk blood vessel | 4.65e-08 | 1 |
liver parenchyma | 4.65e-08 | 1 |
liver lobule | 4.65e-08 | 1 |
biliary system | 4.65e-08 | 1 |
biliary tree | 4.65e-08 | 1 |
biliary bud | 4.65e-08 | 1 |
hepatic duct | 4.65e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.21e-09 | 3 |
muscle cancer | 1.21e-09 | 3 |