FFCP PHASE1:Mm9::chr7:86983180..86983206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=446 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:86983180..86983206,- | |||
|description=CAGE_peak_at_chr7:86983180..86983206,- | |description=CAGE_peak_at_chr7:86983180..86983206,- | ||
|id=chr7:86983180..86983206,- | |id=chr7:86983180..86983206,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.67e-14,6;CL:0000677,7.67e-14,6;CL:0000584,7.67e-14,6;CL:0000075,8.06e-12,7;CL:0000473,8.04e-11,7;CL:0000682,6.75e-10,3;CL:0002563,4.05e-09,9;CL:0002251,4.05e-09,9;CL:0000066,3.94e-07,25;CL:0002476,5.68e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.34e-16!43;UBERON:0005409!5.62e-14!59;UBERON:0000344!1.64e-08!15;UBERON:0001242!6.69e-07!13;UBERON:0000060!6.69e-07!13;UBERON:0001262!6.69e-07!13;UBERON:0004786!6.69e-07!13;UBERON:0004119!8.54e-07!130;UBERON:0000925!8.54e-07!130;UBERON:0006595!8.54e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.02e-29,31;UBERON:0000344,1.04e-23,15;UBERON:0001242,1.16e-18,13;UBERON:0001262,1.16e-18,13;UBERON:0004786,1.16e-18,13;UBERON:0005409,2.52e-18,47;UBERON:0004923,5.01e-14,24;UBERON:0002108,1.34e-12,4;UBERON:0000331,5.09e-10,3;UBERON:0002116,5.09e-10,3;UBERON:0001204,5.09e-10,3;UBERON:0001168,5.09e-10,3;UBERON:0003350,4.05e-09,9;UBERON:0004808,4.05e-09,9;UBERON:0001277,4.05e-09,9;UBERON:0001007,7.30e-08,116;UBERON:0001555,7.30e-08,116;UBERON:0007026,7.30e-08,116;UBERON:0004119,1.17e-07,118;UBERON:0000925,1.17e-07,118;UBERON:0006595,1.17e-07,118;UBERON:0000485,2.14e-07,11;UBERON:0001962,5.68e-07,2;UBERON:0001961,5.68e-07,2;UBERON:0001744,5.68e-07,2 | |||
|phase1_expression=0,10.4692622291808,10.4649825059593,13.6108895088074,9.01612313903425,0.16787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,3.67982572424835,1.83527424853736,5.7423196411502,2.58457197695445,3.01659725760245,13.1116159424898,3.02436155711917,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.899899717281399,3.9554654502679,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0.860423876981386,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,1.98251269790279,9.52022039988759,0,0,0.128867461322093,0.80673409849337,0,1.52180500890047,7.59246498471219,2.79988223030818,0.754005626400808,0.795825888164603,0.779856348476481,8.98819408654222,2.80979464837102,3.18626037206988,0,0,0,0.610953983535943,0.775809948670503,0.911765658574141,0.0632365371242573,0,0.31399745568275,0.493588655687202,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,5.75072826109418,0,0,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,3.01582567878545,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0.775284879504663,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0.329098041204242,0.608929898229199,0.23467170806371,0,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,2.62332752966866,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0.352071715937262,0,0,0,0,0,0.608175645870493,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.618105171716683,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0,0.342869252385415,0.532427418478012,0.476872379894642,0,0.376437521661322,0,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,10.4692622291808,10.4649825059593,13.6108895088074,9.01612313903425,0.16787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,3.67982572424835,1.83527424853736,5.7423196411502,2.58457197695445,3.01659725760245,13.1116159424898,3.02436155711917,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.899899717281399,3.9554654502679,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0.860423876981386,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0,1.98251269790279,9.52022039988759,0,0,0.128867461322093,0.80673409849337,0,1.52180500890047,7.59246498471219,2.79988223030818,0.754005626400808,0.795825888164603,0.779856348476481,8.98819408654222,2.80979464837102,3.18626037206988,0,0,0,0.610953983535943,0.775809948670503,0.911765658574141,0.0632365371242573,0,0.31399745568275,0.493588655687202,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,5.75072826109418,0,0,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,3.01582567878545,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0.775284879504663,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0.329098041204242,0.608929898229199,0.23467170806371,0,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,2.62332752966866,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0.352071715937262,0,0,0,0,0,0.608175645870493,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.618105171716683,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0,0.342869252385415,0.532427418478012,0.476872379894642,0,0.376437521661322,0,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr7:86983180..86983206,- | |short_description=p@chr7:86983180..86983206,- | ||
}} | }} |
Latest revision as of 15:12, 5 August 2015
Short description: | p@chr7:86983180..86983206, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:86983180..86983206, - |
Coexpression cluster: | MCL_coexpression_mm9:446 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.67e-14 | 6 |
gut absorptive cell | 7.67e-14 | 6 |
enterocyte | 7.67e-14 | 6 |
columnar/cuboidal epithelial cell | 8.06e-12 | 7 |
defensive cell | 8.04e-11 | 7 |
M cell of gut | 6.75e-10 | 3 |
intestinal epithelial cell | 4.05e-09 | 9 |
epithelial cell of alimentary canal | 4.05e-09 | 9 |
epithelial cell | 3.94e-07 | 25 |
bone marrow macrophage | 5.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.02e-29 | 31 |
mucosa | 1.04e-23 | 15 |
intestinal mucosa | 1.16e-18 | 13 |
wall of intestine | 1.16e-18 | 13 |
gastrointestinal system mucosa | 1.16e-18 | 13 |
gastrointestinal system | 2.52e-18 | 47 |
organ component layer | 5.01e-14 | 24 |
small intestine | 1.34e-12 | 4 |
ileal mucosa | 5.09e-10 | 3 |
ileum | 5.09e-10 | 3 |
mucosa of small intestine | 5.09e-10 | 3 |
wall of small intestine | 5.09e-10 | 3 |
epithelium of mucosa | 4.05e-09 | 9 |
gastrointestinal system epithelium | 4.05e-09 | 9 |
intestinal epithelium | 4.05e-09 | 9 |
digestive system | 7.30e-08 | 116 |
digestive tract | 7.30e-08 | 116 |
primitive gut | 7.30e-08 | 116 |
endoderm-derived structure | 1.17e-07 | 118 |
endoderm | 1.17e-07 | 118 |
presumptive endoderm | 1.17e-07 | 118 |
simple columnar epithelium | 2.14e-07 | 11 |
gut-associated lymphoid tissue | 5.68e-07 | 2 |
mucosa-associated lymphoid tissue | 5.68e-07 | 2 |
lymphoid tissue | 5.68e-07 | 2 |