FFCP PHASE1:Mm9::chr15:78939341..78939412,+: Difference between revisions
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{{FFCP|EntrezGene=27008|HGNC=|UniProt=Q8BGT6|association_with_transcript=0bp_to_ENSMUST00000040320,NM_177461,uc007wsm.2,uc007wsn.2,uc007wso.2_5end|description=CAGE_peak_1_at_Micall1_5end|id=chr15:78939341..78939412,+|ontology_enrichment_celltype=CL:0002319!6.50e-07!43;CL:0000221!6.98e-07!44;CL:0000133!6.98e-07!44|ontology_enrichment_celltype_v019_2=CL:0002319,6.49e-07,43;CL:0000221,6.97e-07,44;CL:0000133,6.97e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!4.53e-09!18;UBERON:0000948!4.53e-09!18;UBERON:0005498!4.53e-09!18;UBERON:0004140!4.53e-09!18;UBERON:0009881!4.53e-09!18;UBERON:0004141!4.53e-09!18;UBERON:0003084!4.53e-09!18;UBERON:0007005!4.53e-09!18;UBERON:0004139!4.53e-09!18;UBERON:0004291!4.53e-09!18;UBERON:0004535!3.26e-08!23;UBERON:0001009!3.26e-08!23;UBERON:0003103!1.40e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.53e-09,18;UBERON:0000948,4.53e-09,18;UBERON:0005498,4.53e-09,18;UBERON:0004140,4.53e-09,18;UBERON:0009881,4.53e-09,18;UBERON:0004141,4.53e-09,18;UBERON:0003084,4.53e-09,18;UBERON:0007005,4.53e-09,18;UBERON:0004139,4.53e-09,18;UBERON:0004291,4.53e-09,18;UBERON:0004535,3.26e-08,23;UBERON:0001009,3.26e-08,23;UBERON:0003103,1.40e-07,43|phase1_expression=3.52327463630547,2.44282785347553,3.18499467572675,2.41971369045464,1.00179145989269,2.68606835059024,2.56973904655078,12.2667157269497,7.180224829735,7.0219357896598,2.22583358693156,2.71225340584144,8.04643430676667,11.7143339241457,2.33176833270964,0.404950534779652,1.39912375625629,4.88966356305268,5.48457734422955,6.79023442876848,12.4163203620562,3.47518329203099,2.08959831311148,0.95995453676044,1.83527424853736,2.29692785646008,0.430761996159075,1.29282739611533,0.380046838912748,0,0.443461021310609,2.54012269383853,6.76571266343027,0,1.1554064790051,0.997407872150954,1.02084678131185,2.51118978442145,1.5626706890476,2.09409497589519,2.35292595212406,4.78131839470912,2.91306211818692,6.92432498865675,4.96746962975621,6.42413632565885,11.7358701652206,6.32272953503295,16.6961498878199,10.4992145500113,10.4989816219022,11.5002051491977,3.02008690903925,12.3311564141929,4.03312558970957,7.20326420900652,5.73066879877513,7.21940929188419,11.3297218081375,9.52183762689659,6.97214543856797,14.2314703469035,14.2287167377782,4.94944844504769,1.97773272513395,2.8419204597844,8.38880309451533,7.30014780110954,8.70992743391212,7.56033254657468,6.94072372459561,13.9968982357864,10.8225585066291,6.73699395682247,4.98396449294829,6.43453150627015,6.60695285996332,8.93811366596314,8.1411462625809,10.0233578674947,11.5274430939036,11.4600941522487,8.09630697104005,8.4414391504752,8.25110537994775,15.0260578591571,10.1083893367363,13.047961207771,8.25415507331706,11.4868771362314,13.3337664802772,0.860423876981386,4.0798280022465,1.07940638327563,3.89865850468601,1.79210754838934,4.0728881838208,3.57903677413921,2.59786004602869,3.5333957451034,7.46470124816407,2.56652954828636,7.64415719119937,7.11066703153331,2.16491041011214,3.04031838570118,1.51657333504435,4.68153906848146,6.21450920753212,6.67989625791711,7.28638372417771,5.48037860961854,6.22661842591358,4.37095657602605,7.99603208522793,7.53999547978053,8.40462890296871,8.53136205827479,3.5384422077995,7.27950824763341,5.07935492458905,0.969750506270444,0,8.49064311333487,6.91174132484402,1.27728527604296,1.91704199209472,4.19931911695385,1.52484272487678,7.33974133083631,5.03250663100489,8.04187853522332,6.25767552692195,5.37002460393694,7.06479351502504,8.76102820565891,9.3692214742291,2.73695335342205,1.76905930903572,3.57751155007006,5.59517904739626,4.82794419310293,9.36323074987816,6.0281927134286,6.5995404176788,7.04625461566674,7.87094486301722,6.72628763921441,7.54487975264948,14.7502742530899,14.2520410572799,10.7405908889512,11.3999372182495,10.0993128291428,5.14455341019859,6.56813080501028,1.40442637462647,1.54408744268829,1.13665399758237,19.8840741634082,11.2572508790926,13.3245925481151,24.6214525008619,18.495837784256,19.591923336697,22.0907247512887,31.6562613651551,22.6524764192309,30.2790123840804,19.5359282254123,18.6458261955468,17.2515985161892,14.0512073786272,13.4206418760372,6.51898840548794,15.4356918568927,0.330418782983798,1.32225283331772,10.024547775156,13.4697269679054,12.5001437482431,10.6892268050372,8.45036566610507,8.94060442729028,3.32170343081158,5.76446341534038,6.53471542880701,5.37182474511107,6.43381487493096,2.69645822596266,1.72910439899755,1.99141273254367,9.67306294860717,7.88314737007129,13.5249282807697,8.75700709734851,7.5641469995374,9.53847150508332,12.4575978134787,7.38050739898011,5.65195420228949,5.67626954040282,1.48226313543574,4.00428253718626,2.75182593158484,2.02375901146368,1.82574109249653,2.41177159752417,3.05551022137704,3.74004978686054,3.40483976227574,0.549122826376163,2.87536413054709,5.58211421502755,3.12037673114561,2.52578877947112,1.79397413521912,1.4473305640901,7.57488079683079,5.87423376488503,9.61493361007953,7.1292936025579,9.62230017982859,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:27008 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BGT6 | |||
|association_with_transcript=0bp_to_ENSMUST00000040320,NM_177461,uc007wsm.2,uc007wsn.2,uc007wso.2_5end | |||
|cluster_id=chr15:78939341..78939412,+ | |||
|description=CAGE_peak_1_at_Micall1_5end | |||
|id=chr15:78939341..78939412,+ | |||
|ontology_enrichment_celltype=CL:0002319!6.50e-07!43;CL:0000221!6.98e-07!44;CL:0000133!6.98e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.49e-07,43;CL:0000221,6.97e-07,44;CL:0000133,6.97e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.53e-09!18;UBERON:0000948!4.53e-09!18;UBERON:0005498!4.53e-09!18;UBERON:0004140!4.53e-09!18;UBERON:0009881!4.53e-09!18;UBERON:0004141!4.53e-09!18;UBERON:0003084!4.53e-09!18;UBERON:0007005!4.53e-09!18;UBERON:0004139!4.53e-09!18;UBERON:0004291!4.53e-09!18;UBERON:0004535!3.26e-08!23;UBERON:0001009!3.26e-08!23;UBERON:0003103!1.40e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.53e-09,18;UBERON:0000948,4.53e-09,18;UBERON:0005498,4.53e-09,18;UBERON:0004140,4.53e-09,18;UBERON:0009881,4.53e-09,18;UBERON:0004141,4.53e-09,18;UBERON:0003084,4.53e-09,18;UBERON:0007005,4.53e-09,18;UBERON:0004139,4.53e-09,18;UBERON:0004291,4.53e-09,18;UBERON:0004535,3.26e-08,23;UBERON:0001009,3.26e-08,23;UBERON:0003103,1.40e-07,43 | |||
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| |||
|short_description=p1@Micall1 | |||
}} |
Revision as of 15:08, 5 August 2015
Short description: | p1@Micall1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Micall1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000040320, NM_177461, uc007wsm.2, uc007wsn.2, uc007wso.2_5end |
EntrezGene: | 27008 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.49e-07 | 43 |
ectodermal cell | 6.97e-07 | 44 |
neurectodermal cell | 6.97e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 4.53e-09 | 18 |
heart | 4.53e-09 | 18 |
primitive heart tube | 4.53e-09 | 18 |
primary heart field | 4.53e-09 | 18 |
anterior lateral plate mesoderm | 4.53e-09 | 18 |
heart tube | 4.53e-09 | 18 |
heart primordium | 4.53e-09 | 18 |
cardiac mesoderm | 4.53e-09 | 18 |
cardiogenic plate | 4.53e-09 | 18 |
heart rudiment | 4.53e-09 | 18 |
cardiovascular system | 3.26e-08 | 23 |
circulatory system | 3.26e-08 | 23 |
compound organ | 1.40e-07 | 43 |