FFCP PHASE1:Mm9::chr18:31607037..31607061,-: Difference between revisions
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{{FFCP|EntrezGene=20983|HGNC=|MCL_coexpression_id=1|UniProt=P40749,Q571C5|association_with_transcript=7bp_to_ENSMUST00000025110,ENSMUST00000165336,NM_009308,uc008ehy.1_5end|description=CAGE_peak_2_at_Syt4_5end|id=chr18:31607037..31607061,-|ontology_enrichment_celltype=CL:0000540!1.09e-18!33;CL:0000047!1.09e-18!33;CL:0000031!1.09e-18!33;CL:0000404!1.09e-18!33;CL:0000117!2.83e-15!23;CL:0000337!2.83e-15!23;CL:0000221!1.65e-14!44;CL:0000133!1.65e-14!44;CL:0002319!1.65e-14!43;CL:0000393!3.38e-13!39;CL:0000211!3.38e-13!39;CL:0000055!4.33e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.20e-20,33;CL:0000047,1.20e-20,33;CL:0000031,1.20e-20,33;CL:0000404,1.20e-20,33;CL:0000117,1.85e-17,23;CL:0000337,1.85e-17,23;CL:0000393,2.52e-15,39;CL:0000211,2.52e-15,39;CL:0002319,4.54e-15,43;CL:0000221,2.08e-14,44;CL:0000133,2.08e-14,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!9.33e-36!102;UBERON:0000924!9.33e-36!102;UBERON:0006601!9.33e-36!102;UBERON:0000073!4.07e-34!75;UBERON:0001016!4.07e-34!75;UBERON:0001017!7.63e-33!73;UBERON:0005743!7.63e-33!73;UBERON:0002346!4.99e-32!71;UBERON:0003075!4.99e-32!71;UBERON:0007284!4.99e-32!71;UBERON:0001049!1.56e-25!52;UBERON:0005068!1.56e-25!52;UBERON:0006241!1.56e-25!52;UBERON:0007135!1.56e-25!52;UBERON:0000033!5.63e-25!63;UBERON:0000955!3.08e-24!50;UBERON:0006238!3.08e-24!50;UBERON:0002616!1.25e-23!49;UBERON:0003056!2.55e-22!49;UBERON:0003080!8.16e-20!40;UBERON:0002020!4.64e-19!34;UBERON:0002780!4.71e-19!39;UBERON:0001890!4.71e-19!39;UBERON:0006240!4.71e-19!39;UBERON:0002791!1.24e-15!29;UBERON:0003528!1.24e-15!29;UBERON:0001893!1.24e-15!29;UBERON:0007811!6.27e-12!86;UBERON:0000956!1.28e-10!21;UBERON:0001869!1.28e-10!21;UBERON:0000203!1.28e-10!21;UBERON:0000153!2.92e-09!94;UBERON:0002619!1.36e-08!17;UBERON:0002021!3.41e-08!10;UBERON:0000411!3.41e-08!10;UBERON:0001950!3.41e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.03e-37,75;UBERON:0001017,5.84e-36,73;UBERON:0004121,8.38e-34,95;UBERON:0000924,8.38e-34,95;UBERON:0006601,8.38e-34,95;UBERON:0002346,1.31e-33,64;UBERON:0003075,1.31e-33,64;UBERON:0007284,1.31e-33,64;UBERON:0000073,2.60e-31,54;UBERON:0001049,2.94e-29,52;UBERON:0005068,2.94e-29,52;UBERON:0006241,2.94e-29,52;UBERON:0007135,2.94e-29,52;UBERON:0010371,5.75e-28,73;UBERON:0003056,3.04e-25,49;UBERON:0000955,5.20e-25,47;UBERON:0006238,5.20e-25,47;UBERON:0002616,2.53e-24,46;UBERON:0003080,4.35e-23,40;UBERON:0002020,3.12e-22,34;UBERON:0002780,3.35e-22,39;UBERON:0001890,3.35e-22,39;UBERON:0006240,3.35e-22,39;UBERON:0010314,1.16e-21,92;UBERON:0003528,3.04e-18,29;UBERON:0002791,3.04e-18,29;UBERON:0001893,3.04e-18,29;UBERON:0000956,2.09e-12,21;UBERON:0001869,2.09e-12,21;UBERON:0000203,2.09e-12,21;UBERON:0002619,4.72e-10,17;UBERON:0002021,2.98e-09,10;UBERON:0000411,2.98e-09,10;UBERON:0001950,2.98e-09,10;UBERON:0002420,3.99e-07,8;UBERON:0007245,3.99e-07,8;UBERON:0010009,3.99e-07,8;UBERON:0010011,3.99e-07,8;UBERON:0000454,3.99e-07,8|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,16.1582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,37.8331781807448,50.2541430308431,33.5930643858275,0,0,0,0,0,0.299600110518405,0.384218305321555,19.4936471139938,15.7956947848078,16.8259969081106,19.4242669394586,24.9581451275323,26.2130310320002,20.9901581529938,16.5459381589804,55.0579404996944,53.5009946576937,64.5147439676223,35.2136388239618,48.2139881784699,36.98484930953,48.0194758282375,46.1465340225978,56.6881499251965,72.1840034410486,56.9486723196412,66.9174010512829,23.2479413532875,19.8753203080846,0,0,0,0.539703191637817,0,0,3.37066608316204,0,0,0,0.985903938436763,0,0,0,0,0,0,2.2836775943812,0,9.20341262201914,2.08182392119363,7.91610243611567,3.22861696158482,8.74191315205211,9.40709657085639,3.14166478324189,0,0.144599356919912,0,0,0,0,1.86391761218122,53.2861050561016,46.0782754989601,0,0,0,0,55.2727459403796,43.9200578705881,30.4083532113132,49.018458294222,41.6816195448439,63.5831416352254,36.3420429271777,0,0,0,5.26104639716185,0.520481771850815,6.66716102857071,7.74267158163002,12.0563854268572,9.18492738542926,9.86475646193343,8.62055865949505,12.9351685369508,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,43.3197294042102,44.5576971602302,0,0.264450566663544,0.426576501070468,0.232236671860439,0.902072229254653,1.21010114774006,1.11189021922435,1.14135375667535,0.949058123089023,1.15289268306808,0.502670417600539,1.59165177632921,1.36474860983384,0,0.648414149624083,0.796565093017469,0.189667900953082,1.14248512609729,1.1270773567308,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0,0,0,0,0,0,0,0,0,0,0,0,45.5963675565329,35.9839877838064,0,0,11.3582958989852,14.8366722832723,23.2657269551423,11.709471099675,18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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20983 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P40749,uniprot:Q571C5 | |||
|association_with_transcript=7bp_to_ENSMUST00000025110,ENSMUST00000165336,NM_009308,uc008ehy.1_5end | |||
|cluster_id=chr18:31607037..31607061,- | |||
|description=CAGE_peak_2_at_Syt4_5end | |||
|id=chr18:31607037..31607061,- | |||
|ontology_enrichment_celltype=CL:0000540!1.09e-18!33;CL:0000047!1.09e-18!33;CL:0000031!1.09e-18!33;CL:0000404!1.09e-18!33;CL:0000117!2.83e-15!23;CL:0000337!2.83e-15!23;CL:0000221!1.65e-14!44;CL:0000133!1.65e-14!44;CL:0002319!1.65e-14!43;CL:0000393!3.38e-13!39;CL:0000211!3.38e-13!39;CL:0000055!4.33e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.20e-20,33;CL:0000047,1.20e-20,33;CL:0000031,1.20e-20,33;CL:0000404,1.20e-20,33;CL:0000117,1.85e-17,23;CL:0000337,1.85e-17,23;CL:0000393,2.52e-15,39;CL:0000211,2.52e-15,39;CL:0002319,4.54e-15,43;CL:0000221,2.08e-14,44;CL:0000133,2.08e-14,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.33e-36!102;UBERON:0000924!9.33e-36!102;UBERON:0006601!9.33e-36!102;UBERON:0000073!4.07e-34!75;UBERON:0001016!4.07e-34!75;UBERON:0001017!7.63e-33!73;UBERON:0005743!7.63e-33!73;UBERON:0002346!4.99e-32!71;UBERON:0003075!4.99e-32!71;UBERON:0007284!4.99e-32!71;UBERON:0001049!1.56e-25!52;UBERON:0005068!1.56e-25!52;UBERON:0006241!1.56e-25!52;UBERON:0007135!1.56e-25!52;UBERON:0000033!5.63e-25!63;UBERON:0000955!3.08e-24!50;UBERON:0006238!3.08e-24!50;UBERON:0002616!1.25e-23!49;UBERON:0003056!2.55e-22!49;UBERON:0003080!8.16e-20!40;UBERON:0002020!4.64e-19!34;UBERON:0002780!4.71e-19!39;UBERON:0001890!4.71e-19!39;UBERON:0006240!4.71e-19!39;UBERON:0002791!1.24e-15!29;UBERON:0003528!1.24e-15!29;UBERON:0001893!1.24e-15!29;UBERON:0007811!6.27e-12!86;UBERON:0000956!1.28e-10!21;UBERON:0001869!1.28e-10!21;UBERON:0000203!1.28e-10!21;UBERON:0000153!2.92e-09!94;UBERON:0002619!1.36e-08!17;UBERON:0002021!3.41e-08!10;UBERON:0000411!3.41e-08!10;UBERON:0001950!3.41e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.03e-37,75;UBERON:0001017,5.84e-36,73;UBERON:0004121,8.38e-34,95;UBERON:0000924,8.38e-34,95;UBERON:0006601,8.38e-34,95;UBERON:0002346,1.31e-33,64;UBERON:0003075,1.31e-33,64;UBERON:0007284,1.31e-33,64;UBERON:0000073,2.60e-31,54;UBERON:0001049,2.94e-29,52;UBERON:0005068,2.94e-29,52;UBERON:0006241,2.94e-29,52;UBERON:0007135,2.94e-29,52;UBERON:0010371,5.75e-28,73;UBERON:0003056,3.04e-25,49;UBERON:0000955,5.20e-25,47;UBERON:0006238,5.20e-25,47;UBERON:0002616,2.53e-24,46;UBERON:0003080,4.35e-23,40;UBERON:0002020,3.12e-22,34;UBERON:0002780,3.35e-22,39;UBERON:0001890,3.35e-22,39;UBERON:0006240,3.35e-22,39;UBERON:0010314,1.16e-21,92;UBERON:0003528,3.04e-18,29;UBERON:0002791,3.04e-18,29;UBERON:0001893,3.04e-18,29;UBERON:0000956,2.09e-12,21;UBERON:0001869,2.09e-12,21;UBERON:0000203,2.09e-12,21;UBERON:0002619,4.72e-10,17;UBERON:0002021,2.98e-09,10;UBERON:0000411,2.98e-09,10;UBERON:0001950,2.98e-09,10;UBERON:0002420,3.99e-07,8;UBERON:0007245,3.99e-07,8;UBERON:0010009,3.99e-07,8;UBERON:0010011,3.99e-07,8;UBERON:0000454,3.99e-07,8 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,16.1582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,37.8331781807448,50.2541430308431,33.5930643858275,0,0,0,0,0,0.299600110518405,0.384218305321555,19.4936471139938,15.7956947848078,16.8259969081106,19.4242669394586,24.9581451275323,26.2130310320002,20.9901581529938,16.5459381589804,55.0579404996944,53.5009946576937,64.5147439676223,35.2136388239618,48.2139881784699,36.98484930953,48.0194758282375,46.1465340225978,56.6881499251965,72.1840034410486,56.9486723196412,66.9174010512829,23.2479413532875,19.8753203080846,0,0,0,0.539703191637817,0,0,3.37066608316204,0,0,0,0.985903938436763,0,0,0,0,0,0,2.2836775943812,0,9.20341262201914,2.08182392119363,7.91610243611567,3.22861696158482,8.74191315205211,9.40709657085639,3.14166478324189,0,0.144599356919912,0,0,0,0,1.86391761218122,53.2861050561016,46.0782754989601,0,0,0,0,55.2727459403796,43.9200578705881,30.4083532113132,49.018458294222,41.6816195448439,63.5831416352254,36.3420429271777,0,0,0,5.26104639716185,0.520481771850815,6.66716102857071,7.74267158163002,12.0563854268572,9.18492738542926,9.86475646193343,8.62055865949505,12.9351685369508,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,43.3197294042102,44.5576971602302,0,0.264450566663544,0.426576501070468,0.232236671860439,0.902072229254653,1.21010114774006,1.11189021922435,1.14135375667535,0.949058123089023,1.15289268306808,0.502670417600539,1.59165177632921,1.36474860983384,0,0.648414149624083,0.796565093017469,0.189667900953082,1.14248512609729,1.1270773567308,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0,0,0,0,0,0,0,0,0,0,0,0,45.5963675565329,35.9839877838064,0,0,11.3582958989852,14.8366722832723,23.2657269551423,11.709471099675,18.2694912747563,18.6830510320629,4.85772842009873,12.2747460322751,13.0444966722353,31.8108103257589,0,0,0,0,0,0.242780636154981,0,0.565815239267694,0.590603785761546,0.614870295887855,0,0,1.06949213515416,0.632073515871632,0,1.03135543248187,79.6628677463864,2.88097750450096,1.16422815404479,2.57204442037911,7.62563004661776,8.20496560969525,10.2020392773315,7.61162372786498,0,0,1.98475558249466,0.16488625294148,0.807322133479528,1.14594557363496,1.07435109602823,0.820704498725306,0.874442509889552,38.0121869121545,0,0,0,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.756037385752609,1.67270636811575,0.655087691238533,1.07891477107857,1.23980183588004,1.04702376793612,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73870634628971,0,0,0.428736758158132,0,50.2629139929189,45.5721984142105,50.9877006961063,35.0580491981123,47.2706938641743,41.5466643564335,49.2766425169218,74.3029985319964,65.7056493027097,57.9891549162038,1.14166082342594,3.99024873401031,4.09760653809922,7.77941494618541,5.03071590307158,6.25067928730048,9.11211583986622,9.47761263298913,6.4183841918363,8.08631077644152,8.11133759648767,9.24269072791773,9.73871677686777,8.32326981263301,9.64915878454303,7.62069906052918,7.76424983830532,8.10218725947561,6.1812885120496,8.97913412819824,5.82877729055206,8.69631450180754,6.91464950847231,8.72078499793971,7.9992973353031,9.13837765230106,9.69518256225695,7.10288220882176,10.1853085384396,8.97827634652382,6.16902094245706,7.2893316957917,10.2307760792422,7.7468420592983,5.40138510747196,10.7418548513317,5.14649538579898,5.58664740525576,3.06061331310149,1.32354851471709,0.927471342481686 | |||
|short_description=p2@Syt4 | |||
}} |
Revision as of 15:05, 5 August 2015
Short description: | p2@Syt4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Syt4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 7bp_to_ENSMUST00000025110, ENSMUST00000165336, NM_009308, uc008ehy.1_5end |
EntrezGene: | 20983 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.20e-20 | 33 |
neuronal stem cell | 1.20e-20 | 33 |
neuroblast | 1.20e-20 | 33 |
electrically signaling cell | 1.20e-20 | 33 |
CNS neuron (sensu Vertebrata) | 1.85e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.85e-17 | 23 |
electrically responsive cell | 2.52e-15 | 39 |
electrically active cell | 2.52e-15 | 39 |
neural cell | 4.54e-15 | 43 |
ectodermal cell | 2.08e-14 | 44 |
neurectodermal cell | 2.08e-14 | 44 |