FFCP PHASE1:Mm9::chr13:111190894..111190898,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=504|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:111190894..111190898,+|id=chr13:111190894..111190898,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.11e-21,3;CL:0002202,1.11e-21,3;CL:0000069,1.11e-21,3;CL:0002632,1.11e-21,3;CL:0002368,1.11e-21,3;CL:0000307,1.11e-21,3;CL:0000377,1.11e-21,3;CL:0000223,7.89e-09,20;CL:0000213,2.16e-08,1;CL:0002078,2.16e-08,1;CL:0000115,2.16e-08,1;CL:0002262,2.16e-08,1;CL:1000398,2.16e-08,1;CL:0002076,8.24e-08,15;CL:0000066,4.82e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.11e-21,3;UBERON:0001005,1.11e-21,3;UBERON:0007196,1.11e-21,3;UBERON:0001558,1.11e-21,3;UBERON:0002021,9.60e-17,10;UBERON:0000411,9.60e-17,10;UBERON:0001950,9.60e-17,10;UBERON:0002619,7.40e-10,17;UBERON:0002394,2.16e-08,1;UBERON:0001281,2.16e-08,1;UBERON:0000353,2.16e-08,1;UBERON:0003497,2.16e-08,1;UBERON:0003909,2.16e-08,1;UBERON:0003928,2.16e-08,1;UBERON:0003835,2.16e-08,1;UBERON:0003513,2.16e-08,1;UBERON:0001280,2.16e-08,1;UBERON:0004647,2.16e-08,1;UBERON:0002294,2.16e-08,1;UBERON:0001173,2.16e-08,1;UBERON:0004912,2.16e-08,1;UBERON:0005171,2.16e-08,1;UBERON:0000956,5.69e-08,21;UBERON:0001869,5.69e-08,21;UBERON:0000203,5.69e-08,21|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.608261587317087,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0.311068836925433,0.675029691658453,0,0.571301968807607,0,0.734944795289724,0.191690942036473,0,0,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.427115042397309,0,0.832988126665025,0.604572480854284,3.47837386442013,0,0,0,0,0,0,0,0,0,0,0,0,7.11066703153331,4.11332977921307,2.78695852022608,2.52762222507392,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0,0,0,0,0.127070227073065,0,0,0.753926112677186,0.173824320192276,0.511430914660661,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0,0,0.964887042726734,0,0,0.325929952884052,0.339490171550376,0.469380496577004,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0.478364305972461,0.163863314715738,0,0.289298117163023,1.50791283939272,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0.238968797952552,0,0.566153061577665,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.485561272309963,1.209294227859,0.565815239267694,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0,0.388076051348264,0,0.177340233642274,0,0.329098041204242,0.913394847343798,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,0,0,0,0,0.214368379079066,0,0.564751842617067,1.84130094602871,1.14579102687879,2.23409137046794,1.37016503954128,1.5107877947794,0,0,0,0.51776031175182,0.31136204275253,0,0,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0,0,0,0.578727661391115,0.412085900803307,0.147198920134397,1.02860775715625,0.354951612318675,0.476872379894642,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr13:111190894..111190898,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=504 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:111190894..111190898,+ | |||
|description=CAGE_peak_at_chr13:111190894..111190898,+ | |||
|id=chr13:111190894..111190898,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.11e-21,3;CL:0002202,1.11e-21,3;CL:0000069,1.11e-21,3;CL:0002632,1.11e-21,3;CL:0002368,1.11e-21,3;CL:0000307,1.11e-21,3;CL:0000377,1.11e-21,3;CL:0000223,7.89e-09,20;CL:0000213,2.16e-08,1;CL:0002078,2.16e-08,1;CL:0000115,2.16e-08,1;CL:0002262,2.16e-08,1;CL:1000398,2.16e-08,1;CL:0002076,8.24e-08,15;CL:0000066,4.82e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.11e-21,3;UBERON:0001005,1.11e-21,3;UBERON:0007196,1.11e-21,3;UBERON:0001558,1.11e-21,3;UBERON:0002021,9.60e-17,10;UBERON:0000411,9.60e-17,10;UBERON:0001950,9.60e-17,10;UBERON:0002619,7.40e-10,17;UBERON:0002394,2.16e-08,1;UBERON:0001281,2.16e-08,1;UBERON:0000353,2.16e-08,1;UBERON:0003497,2.16e-08,1;UBERON:0003909,2.16e-08,1;UBERON:0003928,2.16e-08,1;UBERON:0003835,2.16e-08,1;UBERON:0003513,2.16e-08,1;UBERON:0001280,2.16e-08,1;UBERON:0004647,2.16e-08,1;UBERON:0002294,2.16e-08,1;UBERON:0001173,2.16e-08,1;UBERON:0004912,2.16e-08,1;UBERON:0005171,2.16e-08,1;UBERON:0000956,5.69e-08,21;UBERON:0001869,5.69e-08,21;UBERON:0000203,5.69e-08,21 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.608261587317087,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0.311068836925433,0.675029691658453,0,0.571301968807607,0,0.734944795289724,0.191690942036473,0,0,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.427115042397309,0,0.832988126665025,0.604572480854284,3.47837386442013,0,0,0,0,0,0,0,0,0,0,0,0,7.11066703153331,4.11332977921307,2.78695852022608,2.52762222507392,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0,0,0,0,0.127070227073065,0,0,0.753926112677186,0.173824320192276,0.511430914660661,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0,0,0.964887042726734,0,0,0.325929952884052,0.339490171550376,0.469380496577004,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0.478364305972461,0.163863314715738,0,0.289298117163023,1.50791283939272,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0.238968797952552,0,0.566153061577665,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.485561272309963,1.209294227859,0.565815239267694,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0,0.388076051348264,0,0.177340233642274,0,0.329098041204242,0.913394847343798,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,0,0,0,0,0.214368379079066,0,0.564751842617067,1.84130094602871,1.14579102687879,2.23409137046794,1.37016503954128,1.5107877947794,0,0,0,0.51776031175182,0.31136204275253,0,0,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0,0,0,0.578727661391115,0.412085900803307,0.147198920134397,1.02860775715625,0.354951612318675,0.476872379894642,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:111190894..111190898,+ | |||
}} |
Latest revision as of 14:29, 5 August 2015
Short description: | p@chr13:111190894..111190898, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:111190894..111190898, + |
Coexpression cluster: | MCL_coexpression_mm9:504 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.11e-21 | 3 |
epithelial cell of tracheobronchial tree | 1.11e-21 | 3 |
branched duct epithelial cell | 1.11e-21 | 3 |
epithelial cell of lower respiratory tract | 1.11e-21 | 3 |
respiratory epithelial cell | 1.11e-21 | 3 |
tracheal epithelial cell | 1.11e-21 | 3 |
tracheoblast | 1.11e-21 | 3 |
endodermal cell | 7.89e-09 | 20 |
lining cell | 2.16e-08 | 1 |
meso-epithelial cell | 2.16e-08 | 1 |
endothelial cell | 2.16e-08 | 1 |
endothelial cell of sinusoid | 2.16e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.16e-08 | 1 |
endo-epithelial cell | 8.24e-08 | 15 |
epithelial cell | 4.82e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.11e-21 | 3 |
respiratory airway | 1.11e-21 | 3 |
tracheobronchial tree | 1.11e-21 | 3 |
lower respiratory tract | 1.11e-21 | 3 |
occipital lobe | 9.60e-17 | 10 |
visual cortex | 9.60e-17 | 10 |
neocortex | 9.60e-17 | 10 |
regional part of cerebral cortex | 7.40e-10 | 17 |
bile duct | 2.16e-08 | 1 |
hepatic sinusoid | 2.16e-08 | 1 |
parenchyma | 2.16e-08 | 1 |
abdomen blood vessel | 2.16e-08 | 1 |
sinusoid | 2.16e-08 | 1 |
digestive system duct | 2.16e-08 | 1 |
abdominal segment blood vessel | 2.16e-08 | 1 |
trunk blood vessel | 2.16e-08 | 1 |
liver parenchyma | 2.16e-08 | 1 |
liver lobule | 2.16e-08 | 1 |
biliary system | 2.16e-08 | 1 |
biliary tree | 2.16e-08 | 1 |
biliary bud | 2.16e-08 | 1 |
hepatic duct | 2.16e-08 | 1 |
cerebral cortex | 5.69e-08 | 21 |
cerebral hemisphere | 5.69e-08 | 21 |
pallium | 5.69e-08 | 21 |