FFCP PHASE1:Mm9::chr9:71440187..71440194,-: Difference between revisions
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{{FFCP|EntrezGene=102371|HGNC=|MCL_coexpression_id=19|UniProt=Q3UIJ9,B2RT00|association_with_transcript=-20bp_to_ENSMUST00000093823,ENSMUST00000163708,NM_001033208,uc009qpa.1_5end|description=CAGE_peak_4_at_Gcom1_5end|id=chr9:71440187..71440194,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.00e-11!18;UBERON:0000948!1.00e-11!18;UBERON:0005498!1.00e-11!18;UBERON:0004140!1.00e-11!18;UBERON:0009881!1.00e-11!18;UBERON:0004141!1.00e-11!18;UBERON:0003084!1.00e-11!18;UBERON:0007005!1.00e-11!18;UBERON:0004139!1.00e-11!18;UBERON:0004291!1.00e-11!18;UBERON:0003103!6.84e-09!43;UBERON:0004535!4.64e-08!23;UBERON:0001009!4.64e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.85e-25,18;UBERON:0000948,1.85e-25,18;UBERON:0005498,1.85e-25,18;UBERON:0004140,1.85e-25,18;UBERON:0009881,1.85e-25,18;UBERON:0004141,1.85e-25,18;UBERON:0003084,1.85e-25,18;UBERON:0007005,1.85e-25,18;UBERON:0004139,1.85e-25,18;UBERON:0004291,1.85e-25,18;UBERON:0004535,6.60e-19,23;UBERON:0001009,6.60e-19,23;UBERON:0003103,2.29e-13,43;UBERON:0004872,2.54e-13,33;UBERON:0003914,2.84e-09,47;UBERON:0003081,8.62e-09,87|phase1_expression=1.12104192973356,1.04692622291808,1.36499771816861,0.60492842261366,1.50268718983904,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0.788655413395594,0.685572168028694,1.69755860719212,0.510259740906419,0,0,0.319984845586813,0.45881856213434,0.57423196411502,1.29228598847722,0.861884930743556,0.760093677825496,0,0.221730510655305,0,0,0,0.577703239502549,0.498703936075477,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.219686182734472,0,0.55994568650145,0,0.838913030288682,0,0,0.257259436035947,0.85960031981627,1.03134418455488,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0.372798891650601,0.151452386666368,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0.170430322578058,0,0,0.563373679106722,1.28326477414318,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.11418387971906,0,0.445326417194474,0.173485326766136,0,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0.494389935468748,0,0,0.485300549842228,0.220841518460394,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0,0,0.407357455401265,0.497627882440372,2.52722758433675,0.420883711772948,0.520481771850815,0.689706313300419,0.180062129805349,0.150704817835715,0.476255494059295,0.512454881139399,0,0.258703370739016,0.431135985865684,0.189106080167819,0.703804496655795,0.876782929710299,0.834141747676794,0.348252166522167,1.02891068203972,0.199034266818493,0,0,0,1.65700618028402,3.51789089971644,2.88099298337624,3.07768156260773,5.50939848892731,2.93107514486019,4.18561100550734,6.43856163359086,8.17357396570186,3.62031669809657,6.40253109908471,4.45878452502207,4.67839959761063,3.73235195994786,3.89198614405078,0,0.102904612379284,0.660837565967596,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.951128130562796,0,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,0,0.216138049874694,0.597423819763102,1.13800740571849,0.228497025219458,0,0,0.387904974335251,0.771494018793504,0.442655759869801,0.442830443938806,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0,0,1.10851914099963,0.757965647081939,0.162964976442026,0.678980343100753,0.938760993154008,0.502518772325447,0.714130922658041,1.36593553500459,0.945810864637146,0.221464689648775,0.956728611944923,1.3109065177259,0.863424909329478,1.15719246865209,0,0,0.491764273019036,0.275936746304732,0,0,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0,0,0,0.395287777946524,0.321321316421807,0,0.35613120733451,0.325773918707152,0.494910368917606,0,1.21390318077491,0.604647113929502,0.943025398779491,1.18120757152309,0,0.258428293168221,0.363533729477506,0.356497378384721,1.26414703174326,1.05418608574999,3.09406629744561,0,0.18006109403131,0.388076051348264,0.214337035031592,0.354680467284547,0.356737635204141,0.493647061806363,0,1.17335854031855,0,1.10264199027481,0.98931751764888,1.29171541356724,0.361877549568935,1.43246812803764,1.64140899745061,0.582961673259701,0,0,0.206386867963223,0.185194527369712,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,0.632671987162271,0.813277868507395,0.216010681643603,0.627264888043406,0,0.269728692769641,0.330613822901344,0.26175594198403,0.518459893167171,4.34937519160848,0,0,0.330916980914195,0.194451188344048,0.387479470433193,0.168956125490778,0.234714477291508,0.781226309063701,0.734015410979976,0,0,0.316011120628178,0.405450430580328,0.616265742988964,1.03936658382236,1.61124026100733,0.3973627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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:102371 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UIJ9,uniprot:B2RT00 | |||
|association_with_transcript=-20bp_to_ENSMUST00000093823,ENSMUST00000163708,NM_001033208,uc009qpa.1_5end | |||
|cluster_id=chr9:71440187..71440194,- | |||
|description=CAGE_peak_4_at_Gcom1_5end | |||
|id=chr9:71440187..71440194,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.00e-11!18;UBERON:0000948!1.00e-11!18;UBERON:0005498!1.00e-11!18;UBERON:0004140!1.00e-11!18;UBERON:0009881!1.00e-11!18;UBERON:0004141!1.00e-11!18;UBERON:0003084!1.00e-11!18;UBERON:0007005!1.00e-11!18;UBERON:0004139!1.00e-11!18;UBERON:0004291!1.00e-11!18;UBERON:0003103!6.84e-09!43;UBERON:0004535!4.64e-08!23;UBERON:0001009!4.64e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.85e-25,18;UBERON:0000948,1.85e-25,18;UBERON:0005498,1.85e-25,18;UBERON:0004140,1.85e-25,18;UBERON:0009881,1.85e-25,18;UBERON:0004141,1.85e-25,18;UBERON:0003084,1.85e-25,18;UBERON:0007005,1.85e-25,18;UBERON:0004139,1.85e-25,18;UBERON:0004291,1.85e-25,18;UBERON:0004535,6.60e-19,23;UBERON:0001009,6.60e-19,23;UBERON:0003103,2.29e-13,43;UBERON:0004872,2.54e-13,33;UBERON:0003914,2.84e-09,47;UBERON:0003081,8.62e-09,87 | |||
|phase1_expression=1.12104192973356,1.04692622291808,1.36499771816861,0.60492842261366,1.50268718983904,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0.788655413395594,0.685572168028694,1.69755860719212,0.510259740906419,0,0,0.319984845586813,0.45881856213434,0.57423196411502,1.29228598847722,0.861884930743556,0.760093677825496,0,0.221730510655305,0,0,0,0.577703239502549,0.498703936075477,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.219686182734472,0,0.55994568650145,0,0.838913030288682,0,0,0.257259436035947,0.85960031981627,1.03134418455488,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0.372798891650601,0.151452386666368,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0.170430322578058,0,0,0.563373679106722,1.28326477414318,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.11418387971906,0,0.445326417194474,0.173485326766136,0,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0.494389935468748,0,0,0.485300549842228,0.220841518460394,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0,0,0.407357455401265,0.497627882440372,2.52722758433675,0.420883711772948,0.520481771850815,0.689706313300419,0.180062129805349,0.150704817835715,0.476255494059295,0.512454881139399,0,0.258703370739016,0.431135985865684,0.189106080167819,0.703804496655795,0.876782929710299,0.834141747676794,0.348252166522167,1.02891068203972,0.199034266818493,0,0,0,1.65700618028402,3.51789089971644,2.88099298337624,3.07768156260773,5.50939848892731,2.93107514486019,4.18561100550734,6.43856163359086,8.17357396570186,3.62031669809657,6.40253109908471,4.45878452502207,4.67839959761063,3.73235195994786,3.89198614405078,0,0.102904612379284,0.660837565967596,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.951128130562796,0,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,0,0.216138049874694,0.597423819763102,1.13800740571849,0.228497025219458,0,0,0.387904974335251,0.771494018793504,0.442655759869801,0.442830443938806,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0,0,1.10851914099963,0.757965647081939,0.162964976442026,0.678980343100753,0.938760993154008,0.502518772325447,0.714130922658041,1.36593553500459,0.945810864637146,0.221464689648775,0.956728611944923,1.3109065177259,0.863424909329478,1.15719246865209,0,0,0.491764273019036,0.275936746304732,0,0,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0,0,0,0.395287777946524,0.321321316421807,0,0.35613120733451,0.325773918707152,0.494910368917606,0,1.21390318077491,0.604647113929502,0.943025398779491,1.18120757152309,0,0.258428293168221,0.363533729477506,0.356497378384721,1.26414703174326,1.05418608574999,3.09406629744561,0,0.18006109403131,0.388076051348264,0.214337035031592,0.354680467284547,0.356737635204141,0.493647061806363,0,1.17335854031855,0,1.10264199027481,0.98931751764888,1.29171541356724,0.361877549568935,1.43246812803764,1.64140899745061,0.582961673259701,0,0,0.206386867963223,0.185194527369712,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,0.632671987162271,0.813277868507395,0.216010681643603,0.627264888043406,0,0.269728692769641,0.330613822901344,0.26175594198403,0.518459893167171,4.34937519160848,0,0,0.330916980914195,0.194451188344048,0.387479470433193,0.168956125490778,0.234714477291508,0.781226309063701,0.734015410979976,0,0,0.316011120628178,0.405450430580328,0.616265742988964,1.03936658382236,1.61124026100733,0.39736270956253,0.480781798079875,1.03382669022204,0.504832249740738,0.381034033274999,0.907435666231565,0.877120926657772,1.25075394132428,1.28564592399726,0.680191150845634,0.221985953374065,0.269141569828427,0.335769232728157,1.54551675225752,0.375364950902364,0.36630324853453,0.643105137237198,2.50786052017682,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0.853668028770671,0,0.209613162627982,0.735374033800057,0,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.565879024158229,0.468207537349412,0.704276676453562,0.459483751644906,1.42888107384922,0.811190281613988,0.964546102318525,0.824171801606613,0.294397840268795,0,1.4198064492747,0.238436189947321,0.581385666529314,0.658765662907314,0.423073039458382,0.914639864363863,0.526139422875686,0.407412341537585,0.561142271657738,0.474540072496697,0,0.409231043169689,0.77468420592983,0.192906610981141,0.499621155875892,1.40358965067245,1.07435527024149,0.382576664137687,0.441182838239031,0.695603506861264 | |||
|short_description=p4@Gcom1 | |||
}} |
Revision as of 14:08, 5 August 2015
Short description: | p4@Gcom1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gcom1_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -20bp_to_ENSMUST00000093823, ENSMUST00000163708, NM_001033208, uc009qpa.1_5end |
EntrezGene: | 102371 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.85e-25 | 18 |
heart | 1.85e-25 | 18 |
primitive heart tube | 1.85e-25 | 18 |
primary heart field | 1.85e-25 | 18 |
anterior lateral plate mesoderm | 1.85e-25 | 18 |
heart tube | 1.85e-25 | 18 |
heart primordium | 1.85e-25 | 18 |
cardiac mesoderm | 1.85e-25 | 18 |
cardiogenic plate | 1.85e-25 | 18 |
heart rudiment | 1.85e-25 | 18 |
cardiovascular system | 6.60e-19 | 23 |
circulatory system | 6.60e-19 | 23 |
compound organ | 2.29e-13 | 43 |
splanchnic layer of lateral plate mesoderm | 2.54e-13 | 33 |
epithelial tube | 2.84e-09 | 47 |
lateral plate mesoderm | 8.62e-09 | 87 |