FFCP PHASE1:Mm9::chr13:105413537..105413540,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=29 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:105413537..105413540,+ | |||
|description=CAGE_peak_at_chr13:105413537..105413540,+ | |description=CAGE_peak_at_chr13:105413537..105413540,+ | ||
|id=chr13:105413537..105413540,+ | |id=chr13:105413537..105413540,+ | ||
|ontology_enrichment_celltype=CL:0000624!1.67e-36!8;CL:0000791!1.87e-32!9;CL:0000789!1.87e-32!9;CL:0002420!1.87e-32!9;CL:0002419!1.87e-32!9;CL:0000790!1.87e-32!9;CL:0000084!1.48e-26!11;CL:0000827!1.48e-26!11;CL:0000838!2.42e-24!12;CL:0000542!1.82e-22!13;CL:0000051!1.82e-22!13;CL:0000893!6.43e-22!6;CL:0002489!6.43e-22!6;CL:0000898!6.43e-22!6;CL:0000809!6.43e-22!6;CL:0000810!6.43e-22!6;CL:0000895!6.43e-22!6;CL:0000808!6.43e-22!6;CL:0000894!6.43e-22!6;CL:0000806!6.43e-22!6;CL:0000807!6.43e-22!6;CL:0000805!6.43e-22!6;CL:0002425!6.43e-22!6;CL:0002436!6.43e-22!6;CL:0002427!6.43e-22!6;CL:0002428!6.43e-22!6;CL:0002429!6.43e-22!6;CL:0002433!6.43e-22!6;CL:0002431!6.43e-22!6;CL:0002432!6.43e-22!6;CL:0000738!3.65e-17!17;CL:0002087!3.65e-17!17;CL:0000988!1.32e-15!32;CL:0002032!1.32e-15!32;CL:0000037!1.32e-15!32;CL:0000566!1.32e-15!32;CL:0000837!1.32e-15!32;CL:0002031!1.26e-11!25;CL:0002320!1.05e-10!46;CL:0000134!1.05e-10!46;CL:0000815!9.82e-10!1;CL:0000792!9.82e-10!1;CL:0000219!4.90e-09!54;CL:0000034!1.46e-07!97;CL:0000063!2.78e-07!66 | |ontology_enrichment_celltype=CL:0000624!1.67e-36!8;CL:0000791!1.87e-32!9;CL:0000789!1.87e-32!9;CL:0002420!1.87e-32!9;CL:0002419!1.87e-32!9;CL:0000790!1.87e-32!9;CL:0000084!1.48e-26!11;CL:0000827!1.48e-26!11;CL:0000838!2.42e-24!12;CL:0000542!1.82e-22!13;CL:0000051!1.82e-22!13;CL:0000893!6.43e-22!6;CL:0002489!6.43e-22!6;CL:0000898!6.43e-22!6;CL:0000809!6.43e-22!6;CL:0000810!6.43e-22!6;CL:0000895!6.43e-22!6;CL:0000808!6.43e-22!6;CL:0000894!6.43e-22!6;CL:0000806!6.43e-22!6;CL:0000807!6.43e-22!6;CL:0000805!6.43e-22!6;CL:0002425!6.43e-22!6;CL:0002436!6.43e-22!6;CL:0002427!6.43e-22!6;CL:0002428!6.43e-22!6;CL:0002429!6.43e-22!6;CL:0002433!6.43e-22!6;CL:0002431!6.43e-22!6;CL:0002432!6.43e-22!6;CL:0000738!3.65e-17!17;CL:0002087!3.65e-17!17;CL:0000988!1.32e-15!32;CL:0002032!1.32e-15!32;CL:0000037!1.32e-15!32;CL:0000566!1.32e-15!32;CL:0000837!1.32e-15!32;CL:0002031!1.26e-11!25;CL:0002320!1.05e-10!46;CL:0000134!1.05e-10!46;CL:0000815!9.82e-10!1;CL:0000792!9.82e-10!1;CL:0000219!4.90e-09!54;CL:0000034!1.46e-07!97;CL:0000063!2.78e-07!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,3.07e-86,1;CL:0000792,3.07e-86,1;CL:0000624,2.93e-12,8;CL:0000791,4.56e-11,9;CL:0000789,4.56e-11,9;CL:0002420,4.56e-11,9;CL:0002419,4.56e-11,9;CL:0000790,4.56e-11,9;CL:0000084,2.51e-09,11;CL:0000827,2.51e-09,11;CL:0000838,1.13e-08,12;CL:0000542,4.08e-08,13;CL:0000051,4.08e-08,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.05e-10!46;UBERON:0002370!8.06e-09!23;UBERON:0000974!8.06e-09!23;UBERON:0004807!8.06e-09!23;UBERON:0005058!8.06e-09!23;UBERON:0003351!8.06e-09!23;UBERON:0009113!8.06e-09!23;UBERON:0003295!8.06e-09!23;UBERON:0009722!8.06e-09!23;UBERON:0005562!8.06e-09!23;UBERON:0007690!8.06e-09!23;UBERON:0006562!1.88e-08!24;UBERON:0003408!1.88e-08!24;UBERON:0001557!1.88e-08!24;UBERON:0001042!1.88e-08!24;UBERON:0008814!1.88e-08!24;UBERON:0009145!1.88e-08!24;UBERON:0000072!1.64e-07!27;UBERON:0004177!5.43e-07!29 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,3.74457637980571,0.563154888606667,0.234064526321993,0.856089841127525,0.239316476986009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,3.74457637980571,0.563154888606667,0.234064526321993,0.856089841127525,0.239316476986009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:105413537..105413540,+ | |short_description=p@chr13:105413537..105413540,+ | ||
}} | }} |
Latest revision as of 13:43, 5 August 2015
Short description: | p@chr13:105413537..105413540, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:105413537..105413540, + |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 3.07e-86 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.07e-86 | 1 |
CD4-positive, alpha-beta T cell | 2.93e-12 | 8 |
mature alpha-beta T cell | 4.56e-11 | 9 |
alpha-beta T cell | 4.56e-11 | 9 |
immature T cell | 4.56e-11 | 9 |
mature T cell | 4.56e-11 | 9 |
immature alpha-beta T cell | 4.56e-11 | 9 |
T cell | 2.51e-09 | 11 |
pro-T cell | 2.51e-09 | 11 |
lymphoid lineage restricted progenitor cell | 1.13e-08 | 12 |
lymphocyte | 4.08e-08 | 13 |
common lymphoid progenitor | 4.08e-08 | 13 |