Personal tools

FFCP PHASE1:Mm9::chr2:80421152..80421177,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=50884|HGNC=|MCL_coexpression_id=1610|UniProt=A2AS97,P28660,A2AS98|association_with_transcript=-30bp_to_NM_016965,uc008khm.1,uc008khn.1,uc012byb.1_5end|description=CAGE_peak_4_at_Nckap1_5end|id=chr2:80421152..80421177,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!4.89e-08!10;UBERON:0000411!4.89e-08!10;UBERON:0001950!4.89e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.48e-08,10;UBERON:0000411,4.48e-08,10;UBERON:0001950,4.48e-08,10;UBERON:0004121,6.05e-07,95;UBERON:0000924,6.05e-07,95;UBERON:0006601,6.05e-07,95|phase1_expression=2.08193501236232,3.14077866875425,3.63999391511629,3.62957053568196,5.00895729946347,4.53274034162102,2.10251376535973,0,4.646027831005,7.0219357896598,0.171217968225505,0.239316476986009,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0.137114433605739,0,4.84746753861098,0.0992909512008853,0,2.55987876469451,2.98232065387321,5.16808767703518,3.01533397311352,3.44753972297422,3.42042155021473,4.78857246543868,4.8780712344167,1.90509202037889,2.46025915033828,0,0.866554859253824,1.32987716286794,2.04169356262369,0,0,0,0,0,0,5.91715044485213,5.37297735463427,4.03802854755699,3.12956537739216,1.30815093828268,0.659058548203415,1.55543919259427,2.37976916763116,0,0,0.725362142011344,0.336093799142464,8.48956138918625,4.58453503902011,5.67239301505187,1.21389876515759,1.5869729378161,0,4.06613438482959,0,0.449949858640699,0,0,2.09720077362883,0,1.14058573539325,1.21505344498522,0.420649922702764,4.28476476605705,5.30084498283872,1.34739879136449,0.575072826109418,2.75765635983006,4.40463523997555,7.2781782708557,7.52672012955593,1.05509030184155,1.18933936683133,2.08365348222704,3.35019598801657,2.8138130501584,5.95913166329559,7.66034322231536,8.54230084794618,3.54158947068071,4.61929779332423,3.70300644523249,2.6087803983151,0.860423876981386,3.39985666853875,2.69851595818909,3.24888208723835,3.13618820968135,2.24711072210803,2.89731548382698,2.07828803682295,1.7666978725517,1.26759077799012,3.84979432242953,0,0,3.030874574157,3.54703811665138,4.04419556011827,4.11061966988616,2.33044095282455,1.92974780784272,2.08182392119363,3.04465478312141,2.53677046981664,2.11011696773672,2.4693628498498,4.39833069653864,4.6967043869531,3.47038456607788,0.884610551949874,4.85300549842228,3.3126227769059,1.45462575940567,5.59175283654366,2.04946557908083,6.28340120440365,4.59822699375465,0.11981512450592,0,0.127070227073065,4.04434726393021,13.2675174817402,5.52879149296603,13.0368240144207,12.0186264945255,3.94797284663164,10.8701646255398,4.68461073711455,3.6078021476927,5.05445516867349,2.10441855886474,1.95180664444056,2.06911893990126,3.42118046630164,4.06903008156431,2.78949646520444,3.97152532883034,4.49768277886698,2.84573707812917,0.862271971731369,1.32374256117473,2.81521798662318,3.06874025398605,3.05851974148158,9.4028084960985,6.99659263787008,2.58744546864041,0,0,0.284163499395593,2.27838349789052,2.57978665979206,1.98068267607116,2.84093682702252,1.37734962223183,2.31400669331067,2.32533944750408,3.48755421819505,3.50296027101508,2.79751744852917,4.10418660197738,2.26992666728396,3.36259971078264,1.97595103761946,2.01309628140558,21.8701546506692,5.24813523134351,9.91256348951394,3.96675849995316,2.77274725695804,2.32236671860439,2.44848176511977,2.01683524623343,2.2237804384487,2.47293313946327,2.37264530772256,2.9645811850322,3.77002813200404,3.97912944082302,3.50935356814416,2.69645822596266,6.05186539649144,4.18196673834171,0.948339504765408,3.42745537829186,6.76246414038483,3.46207257337034,2.71533482034676,4.69909993265134,2.84564417059158,2.95220295959204,2.19798218977925,3.08492909804501,1.48226313543574,2.00214126859313,2.55526693647164,1.34917267430912,0.811440485554012,1.20588579876208,2.03700681425136,2.30156909960649,1.62135226775035,1.64736847912849,1.43768206527355,1.48856379067401,1.87222603868736,2.02063102357689,2.33216637578486,1.92977408545347,3.69506380333209,2.84237117655727,4.07412441105065,2.8856664581782,2.11221223459652,2.01007508930179,2.85652369063216,11.3177515757523,5.04432461139811,3.5434350343804,5.58091690301205,3.76885623846197,4.31712454664739,4.19482269886384,0,0,1.47529281905711,2.20749397043786,3.05046120976805,5.74337264301796,1.96721934452011,1.26235463602186,4.10160685241134,3.51394869866975,3.44677436372478,5.25731355495614,6.23836287430704,4.24614796183249,6.47697122679831,2.33804686329049,4.74345333535828,9.3183181762324,2.98074178937364,2.49291845134157,4.88660878060728,1.64970122972535,1.32745138339963,1.94224508923985,2.41858845571801,1.32023555829129,1.77181135728464,2.15204603560749,2.32585463851399,4.72593848320757,5.34746067577082,0.948110273807448,1.05418608574999,2.06271086496374,1.70219802876894,1.8006109403131,1.55230420539305,2.7863814554107,3.01478397191865,4.28085162244969,3.78462747384878,1.522324745573,6.10146440965647,6.99045833850607,2.64634077665954,6.10079135883476,12.2712964288888,7.53911561601948,5.72987251215055,3.44695889464629,3.49777003955821,5.37733375830478,1.36696704638282,1.857481811669,1.48155621895769,1.31857919903284,0.683471138605126,0.457556346413045,0.679913719975421,0.979660166265606,0.552799895217695,16.2294005062569,1.89801596148681,3.65975040828328,2.91614420218863,7.10900206449194,6.98760203987768,7.55240339754996,8.43065248398426,9.6849698534091,5.57344385154709,0.621339313086926,2.25477175473676,3.13984746692355,2.31641886639937,3.50012139019286,3.09983576346555,2.36538575687089,3.87278887530988,2.99470085141085,2.51662426621706,2.41584120826006,2.59227005632079,0,1.41907650703115,0.513554785824136,0.909445760844565,0.358053391334963,0.596044064343795,0.841368146639782,0.590758108698309,0.605798699688886,0.685861259894999,0,0.38983152295901,0.673482891482306,0.350630706544707,10.8830584135301,2.44184548711471,2.69141569828427,3.52557694364565,3.09103350451505,5.06742683718191,1.46521299413812,9.64657705855796,0,18.6368108063632,19.3336599333014,10.8850147553485,25.9498305338968,20.5524755931193,15.8632718451837,15.5255175053315,18.463169332193,18.5788387683524,10.8729665467882,1.66059756134683,2.79317411380722,2.21953687480374,3.16038732188782,1.88651846365184,2.94149613520023,2.00022055021454,0.824140228955577,2.56735367673452,3.28506375292937,2.5347929989024,2.26351609663291,3.55837728385553,2.81710670581425,3.10151532360312,4.28664322154766,4.86714168968393,2.89363830695558,2.47251540481984,2.50238164228475,0.685738504770831,2.8396128985494,2.14592570952589,1.88950341622027,2.4468438907986,2.79228206042532,3.10977553883713,2.63069711437843,3.25929873230068,1.68342681497322,2.96587545310435,3.84167481264697,2.04615521584845,3.09873682371932,5.01557188550968,2.74791635731741,4.21076895201735,4.29742108096597,3.82576664137687,3.30887128679273,2.55054619182464|short_description=p4@Nckap1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:50884
|HGNC=
|MCL_coexpression_id=1610
|TSSclassifier=NA
|UniProt=uniprot:A2AS97,uniprot:P28660,uniprot:A2AS98
|association_with_transcript=-30bp_to_NM_016965,uc008khm.1,uc008khn.1,uc012byb.1_5end
|cluster_id=chr2:80421152..80421177,-
|description=CAGE_peak_4_at_Nckap1_5end
|id=chr2:80421152..80421177,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002021!4.89e-08!10;UBERON:0000411!4.89e-08!10;UBERON:0001950!4.89e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.48e-08,10;UBERON:0000411,4.48e-08,10;UBERON:0001950,4.48e-08,10;UBERON:0004121,6.05e-07,95;UBERON:0000924,6.05e-07,95;UBERON:0006601,6.05e-07,95
|phase1_expression=2.08193501236232,3.14077866875425,3.63999391511629,3.62957053568196,5.00895729946347,4.53274034162102,2.10251376535973,0,4.646027831005,7.0219357896598,0.171217968225505,0.239316476986009,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0.137114433605739,0,4.84746753861098,0.0992909512008853,0,2.55987876469451,2.98232065387321,5.16808767703518,3.01533397311352,3.44753972297422,3.42042155021473,4.78857246543868,4.8780712344167,1.90509202037889,2.46025915033828,0,0.866554859253824,1.32987716286794,2.04169356262369,0,0,0,0,0,0,5.91715044485213,5.37297735463427,4.03802854755699,3.12956537739216,1.30815093828268,0.659058548203415,1.55543919259427,2.37976916763116,0,0,0.725362142011344,0.336093799142464,8.48956138918625,4.58453503902011,5.67239301505187,1.21389876515759,1.5869729378161,0,4.06613438482959,0,0.449949858640699,0,0,2.09720077362883,0,1.14058573539325,1.21505344498522,0.420649922702764,4.28476476605705,5.30084498283872,1.34739879136449,0.575072826109418,2.75765635983006,4.40463523997555,7.2781782708557,7.52672012955593,1.05509030184155,1.18933936683133,2.08365348222704,3.35019598801657,2.8138130501584,5.95913166329559,7.66034322231536,8.54230084794618,3.54158947068071,4.61929779332423,3.70300644523249,2.6087803983151,0.860423876981386,3.39985666853875,2.69851595818909,3.24888208723835,3.13618820968135,2.24711072210803,2.89731548382698,2.07828803682295,1.7666978725517,1.26759077799012,3.84979432242953,0,0,3.030874574157,3.54703811665138,4.04419556011827,4.11061966988616,2.33044095282455,1.92974780784272,2.08182392119363,3.04465478312141,2.53677046981664,2.11011696773672,2.4693628498498,4.39833069653864,4.6967043869531,3.47038456607788,0.884610551949874,4.85300549842228,3.3126227769059,1.45462575940567,5.59175283654366,2.04946557908083,6.28340120440365,4.59822699375465,0.11981512450592,0,0.127070227073065,4.04434726393021,13.2675174817402,5.52879149296603,13.0368240144207,12.0186264945255,3.94797284663164,10.8701646255398,4.68461073711455,3.6078021476927,5.05445516867349,2.10441855886474,1.95180664444056,2.06911893990126,3.42118046630164,4.06903008156431,2.78949646520444,3.97152532883034,4.49768277886698,2.84573707812917,0.862271971731369,1.32374256117473,2.81521798662318,3.06874025398605,3.05851974148158,9.4028084960985,6.99659263787008,2.58744546864041,0,0,0.284163499395593,2.27838349789052,2.57978665979206,1.98068267607116,2.84093682702252,1.37734962223183,2.31400669331067,2.32533944750408,3.48755421819505,3.50296027101508,2.79751744852917,4.10418660197738,2.26992666728396,3.36259971078264,1.97595103761946,2.01309628140558,21.8701546506692,5.24813523134351,9.91256348951394,3.96675849995316,2.77274725695804,2.32236671860439,2.44848176511977,2.01683524623343,2.2237804384487,2.47293313946327,2.37264530772256,2.9645811850322,3.77002813200404,3.97912944082302,3.50935356814416,2.69645822596266,6.05186539649144,4.18196673834171,0.948339504765408,3.42745537829186,6.76246414038483,3.46207257337034,2.71533482034676,4.69909993265134,2.84564417059158,2.95220295959204,2.19798218977925,3.08492909804501,1.48226313543574,2.00214126859313,2.55526693647164,1.34917267430912,0.811440485554012,1.20588579876208,2.03700681425136,2.30156909960649,1.62135226775035,1.64736847912849,1.43768206527355,1.48856379067401,1.87222603868736,2.02063102357689,2.33216637578486,1.92977408545347,3.69506380333209,2.84237117655727,4.07412441105065,2.8856664581782,2.11221223459652,2.01007508930179,2.85652369063216,11.3177515757523,5.04432461139811,3.5434350343804,5.58091690301205,3.76885623846197,4.31712454664739,4.19482269886384,0,0,1.47529281905711,2.20749397043786,3.05046120976805,5.74337264301796,1.96721934452011,1.26235463602186,4.10160685241134,3.51394869866975,3.44677436372478,5.25731355495614,6.23836287430704,4.24614796183249,6.47697122679831,2.33804686329049,4.74345333535828,9.3183181762324,2.98074178937364,2.49291845134157,4.88660878060728,1.64970122972535,1.32745138339963,1.94224508923985,2.41858845571801,1.32023555829129,1.77181135728464,2.15204603560749,2.32585463851399,4.72593848320757,5.34746067577082,0.948110273807448,1.05418608574999,2.06271086496374,1.70219802876894,1.8006109403131,1.55230420539305,2.7863814554107,3.01478397191865,4.28085162244969,3.78462747384878,1.522324745573,6.10146440965647,6.99045833850607,2.64634077665954,6.10079135883476,12.2712964288888,7.53911561601948,5.72987251215055,3.44695889464629,3.49777003955821,5.37733375830478,1.36696704638282,1.857481811669,1.48155621895769,1.31857919903284,0.683471138605126,0.457556346413045,0.679913719975421,0.979660166265606,0.552799895217695,16.2294005062569,1.89801596148681,3.65975040828328,2.91614420218863,7.10900206449194,6.98760203987768,7.55240339754996,8.43065248398426,9.6849698534091,5.57344385154709,0.621339313086926,2.25477175473676,3.13984746692355,2.31641886639937,3.50012139019286,3.09983576346555,2.36538575687089,3.87278887530988,2.99470085141085,2.51662426621706,2.41584120826006,2.59227005632079,0,1.41907650703115,0.513554785824136,0.909445760844565,0.358053391334963,0.596044064343795,0.841368146639782,0.590758108698309,0.605798699688886,0.685861259894999,0,0.38983152295901,0.673482891482306,0.350630706544707,10.8830584135301,2.44184548711471,2.69141569828427,3.52557694364565,3.09103350451505,5.06742683718191,1.46521299413812,9.64657705855796,0,18.6368108063632,19.3336599333014,10.8850147553485,25.9498305338968,20.5524755931193,15.8632718451837,15.5255175053315,18.463169332193,18.5788387683524,10.8729665467882,1.66059756134683,2.79317411380722,2.21953687480374,3.16038732188782,1.88651846365184,2.94149613520023,2.00022055021454,0.824140228955577,2.56735367673452,3.28506375292937,2.5347929989024,2.26351609663291,3.55837728385553,2.81710670581425,3.10151532360312,4.28664322154766,4.86714168968393,2.89363830695558,2.47251540481984,2.50238164228475,0.685738504770831,2.8396128985494,2.14592570952589,1.88950341622027,2.4468438907986,2.79228206042532,3.10977553883713,2.63069711437843,3.25929873230068,1.68342681497322,2.96587545310435,3.84167481264697,2.04615521584845,3.09873682371932,5.01557188550968,2.74791635731741,4.21076895201735,4.29742108096597,3.82576664137687,3.30887128679273,2.55054619182464
|short_description=p4@Nckap1
}}

Revision as of 13:34, 5 August 2015

Short description:p4@Nckap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Nckap1_5end
Coexpression cluster:MCL_coexpression_mm9:1610
Association with transcript: -30bp_to_NM_016965, uc008khm.1, uc008khn.1, uc012byb.1_5end
EntrezGene:50884
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Nckap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.37
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.49
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D94.62
Mouse Schwann, donor2.CNhs12573.11746-123F93.70
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.11
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I34.40
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F54.85
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F15.53
cortex, adult.CNhs10473.12-14D513.04
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B210.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E73.97
eyeball, neonate N02.CNhs11205.1551-44G84.50
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E33.50
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E821.87
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I39.91
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E36.05
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G74.70
kidney, neonate N10.CNhs11206.758-6D52.85
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C611.32
lung, neonate N06.CNhs11212.683-20E55.04
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H24.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I44.89
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I76.10
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C36.10
skin, neonate N00.CNhs11124.650-25G412.27
skin, neonate N03.CNhs11215.662-22H37.54
skin, neonate N06.CNhs11097.693-20I55.73
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D42.92
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C66.99
stomach, neonate N03.CNhs11193.1340-24B87.55
stomach, neonate N07.CNhs11210.718-18A98.43
stomach, neonate N25.CNhs11104.1355-25E49.68
stomach, neonate N30.CNhs11134.1386-42I15.57
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B410.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.69
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D59.65
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A420.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.58
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe4.48e-0810
visual cortex4.48e-0810
neocortex4.48e-0810
ectoderm-derived structure6.05e-0795
ectoderm6.05e-0795
presumptive ectoderm6.05e-0795
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:80421152..80421177,-&oldid=3904785"