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FFCP PHASE1:Mm9::chr6:29476690..29476724,+: Difference between revisions

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{{FFCP|EntrezGene=27056|HGNC=|MCL_coexpression_id=38|UniProt=Q3U169|association_with_transcript=-8bp_to_uc009bdu.1,uc009bdv.1_5end|description=CAGE_peak_1_at_Irf5_5end|id=chr6:29476690..29476724,+|ontology_enrichment_celltype=CL:0002320!6.35e-07!46;CL:0000134!6.35e-07!46|ontology_enrichment_celltype_v019_2=CL:0002320,4.79e-07,46;CL:0000134,4.79e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.96e-14!70;UBERON:0000926!1.29e-13!193;UBERON:0004120!1.29e-13!193;UBERON:0006603!1.29e-13!193;UBERON:0002371!5.27e-11!16;UBERON:0002204!4.20e-10!32;UBERON:0001474!8.84e-10!22;UBERON:0004765!8.84e-10!22;UBERON:0001434!8.84e-10!22;UBERON:0003104!6.05e-09!131;UBERON:0009142!6.05e-09!131;UBERON:0002193!1.17e-08!48;UBERON:0001041!3.57e-08!92;UBERON:0000077!3.74e-08!97;UBERON:0000466!6.53e-08!79;UBERON:0002390!1.86e-07!45;UBERON:0003061!1.86e-07!45;UBERON:0002365!4.25e-07!25;UBERON:0002330!4.25e-07!25;UBERON:0002384!6.35e-07!46;UBERON:0009854!8.01e-07!23;UBERON:0009856!8.01e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.92e-11,16;UBERON:0002204,4.02e-10,32;UBERON:0001474,8.53e-10,22;UBERON:0004765,8.53e-10,22;UBERON:0001434,8.53e-10,22;UBERON:0002193,8.49e-09,48;UBERON:0002405,8.49e-09,48;UBERON:0001041,4.72e-08,80;UBERON:0002100,4.88e-08,90;UBERON:0002390,1.38e-07,45;UBERON:0003061,1.38e-07,45;UBERON:0002365,4.08e-07,25;UBERON:0002330,4.08e-07,25;UBERON:0002384,4.79e-07,46;UBERON:0009854,7.71e-07,23;UBERON:0009856,7.71e-07,23;UBERON:0005256,9.69e-07,45|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,0,0,3.52546471014969,2.10251376535973,8.00564605337773,6.61706994112834,20.3636137900134,0.171217968225505,0.797721589953364,0.856003649656029,0.34968160967599,25.9825614216217,21.0574278085419,13.9912375625629,100.15923750124,90.4955261797876,92.5169440919706,4.76242424845991,18.4681169233647,25.3363795464767,12.9593862462659,14.4527847072317,0.57423196411502,1.7230479846363,2.58565479223067,0.950117097281869,1.26015064879965,2.21730510655305,0,0,0,0,0.831173226792462,0,16.7412652294763,52.3494680830946,17.7998072951091,12.9410927366823,13.6609096991689,11.1667381197165,2.51793635951155,2.83855407414641,1.65192076945513,3.12956537739216,0,0.219686182734472,0.194429899074283,1.67983705950435,0,71.307607574538,5.07753499407941,2.68875039313971,7.20326420900652,8.5960031981627,5.67239301505187,0.404632921719196,0.528990979272033,1.26766280701236,1.69422266034566,3.55717918444456,202.477436388315,229.416996115538,226.643156667806,67.4100248666411,44.9535417226219,0.414758449233911,0.675029691658453,0.420649922702764,1.42825492201902,2.20868540951614,1.46988959057945,0.191690942036473,0,1.10115880999389,3.19218345212969,3.5329502648936,0.395658863190582,0.548925861614458,0.52091337055676,2.79182999001381,2.25105044012672,3.36156145108982,2.94628585473668,1.85083185038834,1.67759501242771,1.13589289999776,0.377857800533928,1.73918693221007,18.0689014166091,15.6393406752783,15.6513925574967,9.09686984426737,9.85659151614138,8.98844288843212,2.72688516124892,2.07828803682295,2.47337702157238,0.14084341977668,0,0,0,1.5154372870785,1.77351905832569,4.54972000513305,5.59501010623394,42.7247508017833,13.3597925158342,1.38788261412909,1.82679286987285,1.84492397804847,1.65794904607885,3.99801604261396,5.90632979249475,2.47194967734374,8.6759614151947,36.2690326299448,5.3383060482645,20.0965781798958,16.9706338597328,13.0474232852686,0.585561594023094,0.41889341362691,9.96282515313506,18.3317140494058,19.196887391789,17.4086211090099,2.99581278809645,5.49000723382352,0.879580464790051,3.47648640384553,3.58001640262463,4.77912502486988,3.40706652442291,5.39748628406676,15.4264643556515,2.77995034277042,1.47309299120532,0.910843100738926,1.14951052216736,2.16074555766419,1.65775299619287,3.74200745332303,2.562274405697,3.27956035959051,1.29351685369508,0.646703978798527,1.32374256117473,0.879755620819744,2.41115305670332,1.11218899690239,3.48252166522167,3.70407845534298,7.76233640592123,16.1509033082044,13.6394390770799,17.6181369625267,7.24940203874257,4.69052119962192,3.42117916775928,2.13070262026689,2.36117078096885,1.69693824176116,1.16266972375204,1.3413670069981,0.934122738937356,1.31647879930784,2.79084688934462,4.05344047729279,3.94739966048397,10.5384055339704,6.84452735677896,3.36463917702604,1.3377599609307,1.65209391491899,2.64450566663544,5.33220626338085,4.41249676534833,2.70621668776396,3.83198696784351,3.55804870151792,2.28270751335071,9.01605216934572,1.64698954724011,5.02670417600539,5.17286827306992,4.09424582950152,1.79763881730844,5.83572734661674,3.58454291857861,2.65535061334314,2.05647322697512,1.1270773567308,2.24016460629846,1.74557238450863,2.66516115583211,3.16182685621286,4.87113488332687,5.49495547444812,3.20832626196681,15.4155366085317,2.33583148002532,6.4864468387357,5.62155280962134,7.70868461276311,9.40590923034426,10.4396599230382,12.083237772934,12.8086829152278,7.4131581560782,15.814502718009,21.95631591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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:27056
|HGNC=
|MCL_coexpression_id=38
|TSSclassifier=NA
|UniProt=uniprot:Q3U169
|association_with_transcript=-8bp_to_uc009bdu.1,uc009bdv.1_5end
|cluster_id=chr6:29476690..29476724,+
|description=CAGE_peak_1_at_Irf5_5end
|id=chr6:29476690..29476724,+
|ontology_enrichment_celltype=CL:0002320!6.35e-07!46;CL:0000134!6.35e-07!46
|ontology_enrichment_celltype_v019_2=CL:0002320,4.79e-07,46;CL:0000134,4.79e-07,46
|ontology_enrichment_disease=
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|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.92e-11,16;UBERON:0002204,4.02e-10,32;UBERON:0001474,8.53e-10,22;UBERON:0004765,8.53e-10,22;UBERON:0001434,8.53e-10,22;UBERON:0002193,8.49e-09,48;UBERON:0002405,8.49e-09,48;UBERON:0001041,4.72e-08,80;UBERON:0002100,4.88e-08,90;UBERON:0002390,1.38e-07,45;UBERON:0003061,1.38e-07,45;UBERON:0002365,4.08e-07,25;UBERON:0002330,4.08e-07,25;UBERON:0002384,4.79e-07,46;UBERON:0009854,7.71e-07,23;UBERON:0009856,7.71e-07,23;UBERON:0005256,9.69e-07,45
|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,0,0,3.52546471014969,2.10251376535973,8.00564605337773,6.61706994112834,20.3636137900134,0.171217968225505,0.797721589953364,0.856003649656029,0.34968160967599,25.9825614216217,21.0574278085419,13.9912375625629,100.15923750124,90.4955261797876,92.5169440919706,4.76242424845991,18.4681169233647,25.3363795464767,12.9593862462659,14.4527847072317,0.57423196411502,1.7230479846363,2.58565479223067,0.950117097281869,1.26015064879965,2.21730510655305,0,0,0,0,0.831173226792462,0,16.7412652294763,52.3494680830946,17.7998072951091,12.9410927366823,13.6609096991689,11.1667381197165,2.51793635951155,2.83855407414641,1.65192076945513,3.12956537739216,0,0.219686182734472,0.194429899074283,1.67983705950435,0,71.307607574538,5.07753499407941,2.68875039313971,7.20326420900652,8.5960031981627,5.67239301505187,0.404632921719196,0.528990979272033,1.26766280701236,1.69422266034566,3.55717918444456,202.477436388315,229.416996115538,226.643156667806,67.4100248666411,44.9535417226219,0.414758449233911,0.675029691658453,0.420649922702764,1.42825492201902,2.20868540951614,1.46988959057945,0.191690942036473,0,1.10115880999389,3.19218345212969,3.5329502648936,0.395658863190582,0.548925861614458,0.52091337055676,2.79182999001381,2.25105044012672,3.36156145108982,2.94628585473668,1.85083185038834,1.67759501242771,1.13589289999776,0.377857800533928,1.73918693221007,18.0689014166091,15.6393406752783,15.6513925574967,9.09686984426737,9.85659151614138,8.98844288843212,2.72688516124892,2.07828803682295,2.47337702157238,0.14084341977668,0,0,0,1.5154372870785,1.77351905832569,4.54972000513305,5.59501010623394,42.7247508017833,13.3597925158342,1.38788261412909,1.82679286987285,1.84492397804847,1.65794904607885,3.99801604261396,5.90632979249475,2.47194967734374,8.6759614151947,36.2690326299448,5.3383060482645,20.0965781798958,16.9706338597328,13.0474232852686,0.585561594023094,0.41889341362691,9.96282515313506,18.3317140494058,19.196887391789,17.4086211090099,2.99581278809645,5.49000723382352,0.879580464790051,3.47648640384553,3.58001640262463,4.77912502486988,3.40706652442291,5.39748628406676,15.4264643556515,2.77995034277042,1.47309299120532,0.910843100738926,1.14951052216736,2.16074555766419,1.65775299619287,3.74200745332303,2.562274405697,3.27956035959051,1.29351685369508,0.646703978798527,1.32374256117473,0.879755620819744,2.41115305670332,1.11218899690239,3.48252166522167,3.70407845534298,7.76233640592123,16.1509033082044,13.6394390770799,17.6181369625267,7.24940203874257,4.69052119962192,3.42117916775928,2.13070262026689,2.36117078096885,1.69693824176116,1.16266972375204,1.3413670069981,0.934122738937356,1.31647879930784,2.79084688934462,4.05344047729279,3.94739966048397,10.5384055339704,6.84452735677896,3.36463917702604,1.3377599609307,1.65209391491899,2.64450566663544,5.33220626338085,4.41249676534833,2.70621668776396,3.83198696784351,3.55804870151792,2.28270751335071,9.01605216934572,1.64698954724011,5.02670417600539,5.17286827306992,4.09424582950152,1.79763881730844,5.83572734661674,3.58454291857861,2.65535061334314,2.05647322697512,1.1270773567308,2.24016460629846,1.74557238450863,2.66516115583211,3.16182685621286,4.87113488332687,5.49495547444812,3.20832626196681,15.4155366085317,2.33583148002532,6.4864468387357,5.62155280962134,7.70868461276311,9.40590923034426,10.4396599230382,12.083237772934,12.8086829152278,7.4131581560782,15.814502718009,21.9563159124417,8.11297950097858,12.8815227753027,11.4814344654024,10.1313139486307,19.7685913478267,2.27389694124582,1.14075483509418,1.69745085775188,1.87752198630802,3.01511263395268,6.42717830392237,6.43941037930736,8.98520321405289,6.64394068946325,9.40783135079174,13.4367918066905,22.2763626607005,16.4899926782923,149.28337109988,135.976420954677,11.8023425524569,6.89841865761831,2.72936002979246,2.46144541843627,3.93443868904021,5.30188947129183,0.315508219416257,0,0,0.716906393857656,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,4.4984984299053,8.51640511249612,6.94455854302295,4.88660878060728,12.7026994688852,15.9294166007955,2.42780636154981,1.81394134178851,1.13163047853539,5.90603785761546,3.68922177532713,6.20227903603731,4.72593848320757,4.9909632973861,6.32073515871632,3.16255825724996,9.28219889233682,1.02131881726136,0.540183282093931,1.29358683782755,1.50035924522115,3.01478397191865,1.07021290561242,1.97458824722545,2.74018454203139,1.64270195644597,1.69465656691056,4.41056796109924,9.23363016472288,7.58882805470756,6.39317004238452,11.9372344003136,12.8029901801148,3.49777003955821,4.26478194624172,37.9333355371233,20.6386867963223,17.0378965180135,18.271740329455,33.3533915639301,38.4347330986958,14.10820968949,15.1147568509551,23.0793956253388,6.68269432610579,3.47969592939249,6.50622294805916,5.18425635944646,4.80903080833278,6.98760203987768,8.4964538222437,9.58780086413897,11.5172614472973,6.35113369129785,6.83473244395618,0.56369293868419,2.99033092087958,2.15096037594227,3.11121901350476,4.00395452780966,1.68956125490778,3.63807439801837,3.25510962109875,2.51662426621706,1.20792060413003,1.72818003754719,12.6404448251271,4.05450430580328,4.31386020092274,5.84643703400078,3.93858730468459,3.77494574084403,3.72605893511903,5.02144392393563,2.92802704849628,3.65792671943999,3.7305688500631,5.84747284438514,6.92725259810372,6.42822961998629,12.2434407152214,0.665957860122194,0.269141569828427,1.17519231454855,11.9777548299958,11.2609485270709,5.49454872801795,9.86094543763703,5.517293144389,2.82375921308533,1.84130094602871,2.86447756719698,1.89038500578056,4.7955776383945,1.5107877947794,3.37511250115903,2.70192721934532,3.17199686288943,4.14208249401456,2.07574695168353,0.399024873401031,2.56100408631201,2.18796045361465,2.72497111416377,3.8607136774503,3.33370091702423,2.26638562962784,3.20919209591815,1.26348605881899,2.28131369901216,3.01802146217722,2.24739617927718,1.85672941974121,3.0440798546475,0.952587382566147,3.01299247456624,2.31491064556446,4.53294490883637,2.79677948255355,1.71434626192708,1.77475806159337,1.90748951957857,2.90692833264657,1.78807822789128,2.70766745253365,3.84148743032822,2.89376682581627,1.90125759384206,2.24456908663095,3.6776855618494,3.34915240076916,1.22769312950907,3.09873682371932,3.2794123866794,4.99621155875892,5.38042699424439,4.29742108096597,5.35607329792761,7.50010825006353,7.18790290423307
|short_description=p1@Irf5
}}

Revision as of 12:59, 5 August 2015

Short description:p1@Irf5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Irf5_5end
Coexpression cluster:MCL_coexpression_mm9:38
Association with transcript: -8bp_to_uc009bdu.1, uc009bdv.1_5end
EntrezGene:27056
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Irf5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A125.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A321.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2100.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A490.50
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A692.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I925.34
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.45
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G816.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H152.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.52
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A271.31
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.20
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7202.48
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7229.42
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2226.64
Mouse Microglia, donor1.CNhs12629.11718-123C867.41
Mouse Microglia, donor2.CNhs12634.11736-123E844.95
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C415.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C815.65
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.60
accessory axillary lymph node, adult.CNhs10475.1063-29H942.72
adrenal gland, adult.CNhs10508.49-24D713.36
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I35.91
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H18.68
bone (os femoris), adult.CNhs10483.56-12G236.27
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A620.10
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H79.96
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C718.33
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D417.41
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.40
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.43
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C63.74
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I67.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.15
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.64
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.62
heart, embryo E11.CNhs10586.331-24E97.25
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G14.05
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D310.54
heart, neonate N30.CNhs11202.1390-42D26.84
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D19.02
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E35.84
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.67
kidney, neonate N10.CNhs11206.758-6D53.16
kidney, neonate N20.CNhs11113.832-19I14.87
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B215.42
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H66.49
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D77.71
liver, embryo E16.CNhs10523.462-17F59.41
liver, embryo E17.CNhs10510.481-18A310.44
liver, embryo E18.CNhs10579.499-43G412.08
liver, neonate N00.CNhs11117.641-24F412.81
liver, neonate N03.CNhs11123.1345-25G27.41
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H221.96
liver, neonate N10.CNhs11115.751-24B98.11
liver, neonate N20.CNhs11220.823-25A312.88
liver, neonate N25.CNhs11198.1368-26H111.48
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B119.77
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C66.44
lung, neonate N06.CNhs11212.683-20E58.99
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E69.41
lung, neonate N20.CNhs11109.822-18A413.44
lung, neonate N25.CNhs11119.1359-25C722.28
lung, neonate N30.CNhs11133.1394-42H216.49
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1149.28
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1135.98
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H26.90
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I78.52
ovary, embryo E18.CNhs11040.505-44H76.94
ovary, neonate N00.CNhs11217.1299-22I44.89
oviduct, adult pregnant day01.CNhs10500.988-6G612.70
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C39.23
skin, neonate N00.CNhs11124.650-25G47.59
skin, neonate N03.CNhs11215.662-22H36.39
skin, neonate N06.CNhs11097.693-20I511.94
skin, neonate N10.CNhs11108.762-6C412.80
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G237.93
spleen, embryo E16.CNhs11035.461-43C120.64
spleen, embryo E18.CNhs11011.1271-21F217.04
spleen, neonate N10.CNhs11116.752-24D118.27
spleen, neonate N20.CNhs11112.824-19H133.35
spleen, neonate N25.CNhs11099.1354-25G338.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.08
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E33.48
stomach, embryo E15.CNhs10603.1252-16G86.51
stomach, embryo E16.CNhs11022.459-17D45.18
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C66.99
stomach, neonate N03.CNhs11193.1340-24B88.50
stomach, neonate N07.CNhs11210.718-18A99.59
stomach, neonate N25.CNhs11104.1355-25E411.52
stomach, neonate N30.CNhs11134.1386-42I16.35
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.99
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I54.00
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B73.64
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B512.64
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I24.31
thymus, embryo E16.CNhs11002.456-26C55.85
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F83.73
thymus, neonate N03.CNhs11137.2104-43C75.02
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D33.66
thymus, neonate N10.CNhs11194.748-24E43.73
thymus, neonate N20.CNhs11186.820-7A25.85
thymus, neonate N25.CNhs11125.1362-25G76.93
thymus, neonate N30.CNhs11132.1393-42G26.43
tongue, adult.CNhs10499.32-1B412.24
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E411.98
uterus, adult pregnant day19.CNhs10497.590-15F511.26
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D59.86
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B47.19





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
connective tissue cell4.79e-0746
mesenchymal cell4.79e-0746

Uber anatomy
Ontology termp-valuen
bone marrow4.92e-1116
musculoskeletal system4.02e-1032
bone element8.53e-1022
skeletal element8.53e-1022
skeletal system8.53e-1022
hemolymphoid system8.49e-0948
immune system8.49e-0948
foregut4.72e-0880
trunk4.88e-0890
hematopoietic system1.38e-0745
blood island1.38e-0745
exocrine gland4.08e-0725
exocrine system4.08e-0725
connective tissue4.79e-0746
digestive tract diverticulum7.71e-0723
sac7.71e-0723
trunk mesenchyme9.69e-0745
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