FFCP PHASE1:Mm9::chr1:196446044..196446066,+: Difference between revisions
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{{FFCP|EntrezGene=18845|HGNC=|MCL_coexpression_id=794|UniProt=P70207|association_with_transcript=21bp_to_ENSMUST00000027952,NM_008882,uc007een.1_5end|description=CAGE_peak_2_at_Plxna2_5end|id=chr1:196446044..196446066,+|ontology_enrichment_celltype=CL:0000117!1.30e-13!23;CL:0000337!1.30e-13!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-13,23;CL:0000337,1.02e-13,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.27e-19!52;UBERON:0005068!1.27e-19!52;UBERON:0006241!1.27e-19!52;UBERON:0007135!1.27e-19!52;UBERON:0002020!1.62e-19!34;UBERON:0000955!9.24e-18!50;UBERON:0006238!9.24e-18!50;UBERON:0002616!1.81e-17!49;UBERON:0000033!6.87e-17!63;UBERON:0002791!2.89e-16!29;UBERON:0003528!2.89e-16!29;UBERON:0001893!2.89e-16!29;UBERON:0001017!7.18e-16!73;UBERON:0005743!7.18e-16!73;UBERON:0000073!2.89e-15!75;UBERON:0001016!2.89e-15!75;UBERON:0002780!1.67e-14!39;UBERON:0001890!1.67e-14!39;UBERON:0006240!1.67e-14!39;UBERON:0003080!1.83e-14!40;UBERON:0003056!2.10e-14!49;UBERON:0002346!7.18e-14!71;UBERON:0003075!7.18e-14!71;UBERON:0007284!7.18e-14!71;UBERON:0004121!2.45e-12!102;UBERON:0000924!2.45e-12!102;UBERON:0006601!2.45e-12!102;UBERON:0000956!4.92e-12!21;UBERON:0001869!4.92e-12!21;UBERON:0000203!4.92e-12!21;UBERON:0000025!4.32e-11!114;UBERON:0004111!2.78e-10!122;UBERON:0002619!1.63e-09!17;UBERON:0000468!4.12e-08!333;UBERON:0002021!2.29e-07!10;UBERON:0000411!2.29e-07!10;UBERON:0001950!2.29e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.28e-21,54;UBERON:0001049,8.82e-20,52;UBERON:0005068,8.82e-20,52;UBERON:0006241,8.82e-20,52;UBERON:0007135,8.82e-20,52;UBERON:0002020,1.13e-19,34;UBERON:0002346,9.56e-18,64;UBERON:0003075,9.56e-18,64;UBERON:0007284,9.56e-18,64;UBERON:0010371,1.20e-16,73;UBERON:0000955,1.47e-16,47;UBERON:0006238,1.47e-16,47;UBERON:0003528,2.15e-16,29;UBERON:0002791,2.15e-16,29;UBERON:0001893,2.15e-16,29;UBERON:0002616,2.86e-16,46;UBERON:0001017,6.60e-16,73;UBERON:0001016,2.67e-15,75;UBERON:0004121,4.27e-15,95;UBERON:0000924,4.27e-15,95;UBERON:0006601,4.27e-15,95;UBERON:0002780,1.28e-14,39;UBERON:0001890,1.28e-14,39;UBERON:0006240,1.28e-14,39;UBERON:0003080,1.41e-14,40;UBERON:0003056,1.62e-14,49;UBERON:0010314,2.74e-13,92;UBERON:0000956,3.98e-12,21;UBERON:0001869,3.98e-12,21;UBERON:0000203,3.98e-12,21;UBERON:0000025,5.67e-11,114;UBERON:0004111,3.60e-10,122;UBERON:0002619,1.38e-09,17;UBERON:0002021,2.04e-07,10;UBERON:0000411,2.04e-07,10;UBERON:0001950,2.04e-07,10|phase1_expression=3.52327463630547,9.07336059862339,7.27998783023258,9.0739263392049,8.01433167914156,4.8684988854448,3.50418960893289,0,0,0,0,0,0,0,0.999329285446988,0.809901069559304,0.699561878128147,0,0.137114433605739,0,3.91199134694921,0.0992909512008853,0,1.59992422793407,1.14704640533585,2.29692785646008,1.7230479846363,4.30942465371778,3.80046838912748,2.26827116783938,0.665191531965914,0,0.61506478758457,0,2.88851619751275,3.49092755252834,3.06254034393554,0,0,0,0,0,0,1.6366586336825,1.21652317463417,1.46837401729345,7.04152209913235,2.61630187656536,2.41654801007919,3.88859798148567,3.91961980551015,0,0,0,0,6.68874533693462,6.01720223871389,5.15672092277442,6.67644320836673,8.46385566835253,7.60597684207415,3.38844532069132,7.11435836888911,2.2497492932035,0.988866362566974,1.4209602298922,4.79360176829448,6.14749288514487,24.6781277294177,23.7610451463776,18.718921560273,13.4255962669788,16.7860091123226,19.1085646775328,23.2904494574314,23.8996884518605,5.50579404996943,9.57655035638908,11.5204899942183,9.10015385338338,10.1551284398675,8.33461392890816,8.93385596804419,10.6924895906019,8.70950012327818,17.6777151284201,14.8066548031067,20.6903384866084,1.8931548333296,2.49386148352392,8.40607017234866,5.16254326188832,2.719885334831,2.69851595818909,3.24888208723835,1.79210754838934,1.82577746171277,2.38602451609281,1.55871602761721,1.41335829804136,2.95771181531029,2.56652954828636,50.9610479413291,14.2213340630666,0.432982082022428,0.506719730950197,1.51657333504435,3.31133251185274,0.517875767294343,1.03909497345377,1.38788261412909,0.913396434936424,1.61430848079241,1.65794904607885,1.52865319276416,0.879666139307728,3.70792451601561,4.48258006451726,0.884610551949874,3.72063754879041,1.54589062922275,1.45462575940567,7.45567044872489,9.07620470735796,12.3573557019938,3.83185582812887,0,0,0.381210681219194,3.89455662452539,15.5550204958333,19.0994615211554,9.73416193076748,11.5071955798649,5.61027720310812,7.30085683804909,3.25885964321012,2.11491850037158,1.0108910337347,3.36706969418358,1.95180664444056,2.5289231487682,1.44049703844279,3.46621081022145,7.14383241088942,6.91814089538189,9.93238280333126,10.3481348295606,0.646703978798527,1.89106080167819,2.81521798662318,1.7535658594206,1.66828349535359,4.179025998266,2.46938563689532,4.57778813682534,0,0.51469581422943,0.568326998791185,1.44988040774851,1.64168241986767,2.70093092191522,2.84093682702252,2.36117078096885,3.5481435964097,3.48800917125612,3.48755421819505,3.03589890154641,3.62031669809657,3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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18845 | |||
|HGNC= | |||
|MCL_coexpression_id=794 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P70207 | |||
|association_with_transcript=21bp_to_ENSMUST00000027952,NM_008882,uc007een.1_5end | |||
|cluster_id=chr1:196446044..196446066,+ | |||
|description=CAGE_peak_2_at_Plxna2_5end | |||
|id=chr1:196446044..196446066,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.30e-13!23;CL:0000337!1.30e-13!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-13,23;CL:0000337,1.02e-13,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.27e-19!52;UBERON:0005068!1.27e-19!52;UBERON:0006241!1.27e-19!52;UBERON:0007135!1.27e-19!52;UBERON:0002020!1.62e-19!34;UBERON:0000955!9.24e-18!50;UBERON:0006238!9.24e-18!50;UBERON:0002616!1.81e-17!49;UBERON:0000033!6.87e-17!63;UBERON:0002791!2.89e-16!29;UBERON:0003528!2.89e-16!29;UBERON:0001893!2.89e-16!29;UBERON:0001017!7.18e-16!73;UBERON:0005743!7.18e-16!73;UBERON:0000073!2.89e-15!75;UBERON:0001016!2.89e-15!75;UBERON:0002780!1.67e-14!39;UBERON:0001890!1.67e-14!39;UBERON:0006240!1.67e-14!39;UBERON:0003080!1.83e-14!40;UBERON:0003056!2.10e-14!49;UBERON:0002346!7.18e-14!71;UBERON:0003075!7.18e-14!71;UBERON:0007284!7.18e-14!71;UBERON:0004121!2.45e-12!102;UBERON:0000924!2.45e-12!102;UBERON:0006601!2.45e-12!102;UBERON:0000956!4.92e-12!21;UBERON:0001869!4.92e-12!21;UBERON:0000203!4.92e-12!21;UBERON:0000025!4.32e-11!114;UBERON:0004111!2.78e-10!122;UBERON:0002619!1.63e-09!17;UBERON:0000468!4.12e-08!333;UBERON:0002021!2.29e-07!10;UBERON:0000411!2.29e-07!10;UBERON:0001950!2.29e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.28e-21,54;UBERON:0001049,8.82e-20,52;UBERON:0005068,8.82e-20,52;UBERON:0006241,8.82e-20,52;UBERON:0007135,8.82e-20,52;UBERON:0002020,1.13e-19,34;UBERON:0002346,9.56e-18,64;UBERON:0003075,9.56e-18,64;UBERON:0007284,9.56e-18,64;UBERON:0010371,1.20e-16,73;UBERON:0000955,1.47e-16,47;UBERON:0006238,1.47e-16,47;UBERON:0003528,2.15e-16,29;UBERON:0002791,2.15e-16,29;UBERON:0001893,2.15e-16,29;UBERON:0002616,2.86e-16,46;UBERON:0001017,6.60e-16,73;UBERON:0001016,2.67e-15,75;UBERON:0004121,4.27e-15,95;UBERON:0000924,4.27e-15,95;UBERON:0006601,4.27e-15,95;UBERON:0002780,1.28e-14,39;UBERON:0001890,1.28e-14,39;UBERON:0006240,1.28e-14,39;UBERON:0003080,1.41e-14,40;UBERON:0003056,1.62e-14,49;UBERON:0010314,2.74e-13,92;UBERON:0000956,3.98e-12,21;UBERON:0001869,3.98e-12,21;UBERON:0000203,3.98e-12,21;UBERON:0000025,5.67e-11,114;UBERON:0004111,3.60e-10,122;UBERON:0002619,1.38e-09,17;UBERON:0002021,2.04e-07,10;UBERON:0000411,2.04e-07,10;UBERON:0001950,2.04e-07,10 | |||
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| |||
|short_description=p2@Plxna2 | |||
}} |
Revision as of 12:56, 5 August 2015
Short description: | p2@Plxna2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Plxna2_5end |
Coexpression cluster: | MCL_coexpression_mm9:794 |
Association with transcript: | 21bp_to_ENSMUST00000027952, NM_008882, uc007een.1_5end |
EntrezGene: | 18845 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.02e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.02e-13 | 23 |