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FFCP PHASE1:Mm9::chr13:100894805..100894841,+: Difference between revisions

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{{FFCP|EntrezGene=20595|HGNC=|MCL_coexpression_id=268|UniProt=P97801,D6RI18,Q549F9,Q5PXT3|association_with_transcript=0bp_to_ENSMUST00000022147,ENSMUST00000134514,ENSMUST00000140745,NM_011420,uc007rqg.1,uc007rqh.1,uc011zdp.1_5end|description=CAGE_peak_1_at_Smn1_5end|id=chr13:100894805..100894841,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=26.9050063136054,13.9590163055744,6.82498859084304,6.95667686005709,5.50985302940982,18.8024784541317,26.8654536684855,25.8246646883153,40.969518146135,34.641549895655,88.1772536361351,100.991553288096,26.8785145991993,31.0342428587441,33.9771957051976,37.4579244671178,30.0811607595103,38.3286530910259,28.5198021899937,34.3755617956405,28.9147186513637,32.0709772378859,36.0455709011731,27.9986739888462,22.4821095445827,10.9104073181854,15.9381938578858,20.6852383378453,20.1424824623756,20.4144405105544,37.2507257900912,53.9776072440687,40.5942759805816,31.6963362030877,33.2179362713966,37.9014991417363,32.6670970019791,39.3419732892693,45.3174499823804,44.4995182377729,34.7056577938298,43.7149110373405,27.6740901227758,41.4200531139649,35.1777951331715,38.9119114582765,49.2906546939265,30.5235218932625,31.4151241310295,24.4981672833597,31.7769177089573,33.0630898039435,23.1539996359676,16.6833292662609,28.9040667262519,31.9001700684574,19.7708073557742,29.9089813520917,47.9490012237247,51.8411159686592,38.6637156138769,34.2232977389823,30.2360230677787,25.6471419425199,31.6437236021432,26.9982443679518,26.664409836138,29.9690278150813,40.0241903510724,42.6618765128142,35.9655683910863,30.8503063156108,30.0381215694194,44.7091417134582,54.9194548934494,49.6378144769411,16.5173821499083,18.6423513604374,20.4296689230804,49.4573578988227,50.9586174865422,31.7757156039624,17.8677119360884,16.3201156909187,21.2389564409766,18.2669722993674,23.7760706934502,34.4838974776806,39.7562514999216,29.4729084416464,32.4648227345879,10.3250865237766,37.3984233539263,13.4925797909454,15.5946340187441,15.2329141613094,24.9991067834518,47.8909206444342,41.3059747318561,44.5207863883029,26.7602497575693,26.9485602570067,35.6727335589304,7.11066703153331,43.2982082022428,38.2573396867399,39.4309067111531,22.1516726654976,64.4755330281458,28.5008907004464,34.1766093729288,30.142082352902,30.4412456377997,27.1300752994721,32.9248379979973,23.1226528046603,31.1465659345311,25.0156887471447,50.4228014611428,29.1180329905337,28.7093973998512,29.5773904412485,52.1896931410742,24.3008061519584,22.2013509222262,23.757506134399,61.9444193695608,93.5848260349716,67.6013608028704,30.8568717173935,27.4500361691176,40.7120100845681,31.9836749153789,23.2701066170601,25.973505569945,24.1739481970959,34.4217049814069,28.2403823284911,28.0522261861379,29.0409761123334,51.7879362991561,39.3132598581239,46.0959052301694,37.0733851875859,33.9502130765126,38.1778886448852,32.139691523987,27.4225572983357,82.7781092862114,55.5971875693389,44.3396832893151,48.6614525989216,40.0388038884861,35.8699731517832,29.6326276427439,36.6223050946027,108.140830846238,98.0495526107065,77.2924718356012,41.4251545071004,35.6479611171266,36.732660538047,33.3810077175146,25.7761143589099,24.6827380619805,21.6256568617879,24.681152928765,25.8051406631445,19.7471819896177,20.3567655458078,17.99727571918,14.3275987676826,21.2963611832319,19.0573114639728,32.5949420274397,48.7767862677808,11.5646574044329,35.7008264995785,53.5353508843437,42.4993109504602,50.7737797609048,40.5383884492919,36.6923772344036,28.3436182907713,19.9302205848695,30.469306623942,23.6255096272253,27.4559931416788,26.9050440224386,31.4586793028978,23.342909386467,19.1175622324193,98.4376405946494,45.0139139682332,36.0664754153857,40.1193115855269,36.269115100346,35.2783174048302,25.0416687012059,22.7319627888587,20.5668333472201,21.7179008502369,22.2339470315362,58.562632106349,53.267487675678,53.5171827475952,41.3834647632546,29.9059678092997,29.5365988066447,25.6049562331221,34.2105328495325,25.2596500133035,57.5072826109418,21.2120340171047,19.3463357331028,20.9640468696103,15.7869723899283,15.4381926836277,28.4519912856571,42.2565848248181,51.8228625085642,46.000918245076,38.4892007193143,33.1662389734795,24.5184950112594,25.5625078693716,30.8964882448134,31.6694506197748,24.874943910568,25.8904037250866,21.9309926969687,22.9992003144603,24.1266054302836,23.3879444042045,29.9976206541612,28.9733583619969,25.2064426280833,21.6841620195576,32.9509240207118,21.4600288123717,35.9679370134533,38.6534356853672,37.2682478077742,42.0585084396492,34.0881971346063,32.5538010407157,31.1704240289669,35.3629588072687,31.2277344577754,33.4174169078679,37.6141225801912,33.476333489444,36.3237919358475,28.5398312742486,25.2215762845929,57.5390107687306,48.0694455573954,36.966595632156,31.8926044311235,28.8989039067292,24.550687850981,22.1755574981278,26.7373033788541,28.4433082142234,15.8127912862498,15.470331487228,33.703520969625,37.9928908406065,47.3452782644882,34.5082626400864,36.1774076630238,34.0684441619955,24.6823530903181,33.7956093517205,38.0168167063211,27.3263371414328,22.0528398054962,50.9498521589173,37.4597469934501,33.1117957855576,32.8273946008625,38.2448296405993,23.3184669303881,26.3303928854924,39.3003025835061,37.3560231013433,51.6692731361496,43.7014820250883,45.2457893756593,28.5972716508153,56.2628603279661,54.441114953903,58.043988997858,33.413471630529,56.3078068574421,37.4107819513402,32.9416289506494,32.6177741782571,32.9727471256728,28.0517840480427,29.4246302382196,16.4906243449939,19.0534010738935,21.1255366449555,45.0954350947352,44.4064141750617,37.8899943146754,31.8899948884238,29.0609602824895,29.3983658353954,37.7890308439328,31.249052362548,34.3938649716332,39.136627573813,37.4439008135225,45.8216124910858,43.5859212873853,50.7392128394247,52.8777749519626,49.9484480912273,48.6769319214099,38.9433256444699,44.011479098024,43.6175063775998,41.0754687870449,41.2379097209678,37.9111156077637,30.9802130081861,33.3099171217471,22.6730383615211,85.908563955763,101.825227251755,82.5992312511266,27.6261119466032,27.5893238913238,34.4325053622458,31.9408884827808,24.0754609936974,28.2375921308533,23.0162618253588,33.8008352929244,19.5912627871804,22.6077231524312,24.9279986138601,25.6508550088086,30.1715206160228,26.7354021300681,26.4057758993428,56.1489550430396,59.0556812633526,44.7322047075832,36.9522209943807,33.3284928578492,25.0027171492019,27.7808409752019,31.7293988147897,34.9801938455079,26.2805100234349,32.9523089857312,27.9166985251393,29.1225088231334,27.5948406864987,27.9710733813837,24.2909782554368,24.3357084484197,26.2356539830639,28.8460130562315,26.9374023845947,28.8010172003749,22.5394273822359,23.6051828047848,23.8368123277019,25.5977514729699,20.8151935413524,25.7928441750609,30.2530168153519,29.0620803630144,29.1793981262024,21.7102083167239,25.1186430057687,27.8277109355389,23.0855893367089,25.0778594275484,31.9757539760571,25.0306821036587,30.941431782955,40.361838066526,26.9121531325809,30.1428186306548|short_description=p1@Smn1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20595
|HGNC=
|MCL_coexpression_id=268
|TSSclassifier=NA
|UniProt=uniprot:P97801,uniprot:D6RI18,uniprot:Q549F9,uniprot:Q5PXT3
|association_with_transcript=0bp_to_ENSMUST00000022147,ENSMUST00000134514,ENSMUST00000140745,NM_011420,uc007rqg.1,uc007rqh.1,uc011zdp.1_5end
|cluster_id=chr13:100894805..100894841,+
|description=CAGE_peak_1_at_Smn1_5end
|id=chr13:100894805..100894841,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=26.9050063136054,13.9590163055744,6.82498859084304,6.95667686005709,5.50985302940982,18.8024784541317,26.8654536684855,25.8246646883153,40.969518146135,34.641549895655,88.1772536361351,100.991553288096,26.8785145991993,31.0342428587441,33.9771957051976,37.4579244671178,30.0811607595103,38.3286530910259,28.5198021899937,34.3755617956405,28.9147186513637,32.0709772378859,36.0455709011731,27.9986739888462,22.4821095445827,10.9104073181854,15.9381938578858,20.6852383378453,20.1424824623756,20.4144405105544,37.2507257900912,53.9776072440687,40.5942759805816,31.6963362030877,33.2179362713966,37.9014991417363,32.6670970019791,39.3419732892693,45.3174499823804,44.4995182377729,34.7056577938298,43.7149110373405,27.6740901227758,41.4200531139649,35.1777951331715,38.9119114582765,49.2906546939265,30.5235218932625,31.4151241310295,24.4981672833597,31.7769177089573,33.0630898039435,23.1539996359676,16.6833292662609,28.9040667262519,31.9001700684574,19.7708073557742,29.9089813520917,47.9490012237247,51.8411159686592,38.6637156138769,34.2232977389823,30.2360230677787,25.6471419425199,31.6437236021432,26.9982443679518,26.664409836138,29.9690278150813,40.0241903510724,42.6618765128142,35.9655683910863,30.8503063156108,30.0381215694194,44.7091417134582,54.9194548934494,49.6378144769411,16.5173821499083,18.6423513604374,20.4296689230804,49.4573578988227,50.9586174865422,31.7757156039624,17.8677119360884,16.3201156909187,21.2389564409766,18.2669722993674,23.7760706934502,34.4838974776806,39.7562514999216,29.4729084416464,32.4648227345879,10.3250865237766,37.3984233539263,13.4925797909454,15.5946340187441,15.2329141613094,24.9991067834518,47.8909206444342,41.3059747318561,44.5207863883029,26.7602497575693,26.9485602570067,35.6727335589304,7.11066703153331,43.2982082022428,38.2573396867399,39.4309067111531,22.1516726654976,64.4755330281458,28.5008907004464,34.1766093729288,30.142082352902,30.4412456377997,27.1300752994721,32.9248379979973,23.1226528046603,31.1465659345311,25.0156887471447,50.4228014611428,29.1180329905337,28.7093973998512,29.5773904412485,52.1896931410742,24.3008061519584,22.2013509222262,23.757506134399,61.9444193695608,93.5848260349716,67.6013608028704,30.8568717173935,27.4500361691176,40.7120100845681,31.9836749153789,23.2701066170601,25.973505569945,24.1739481970959,34.4217049814069,28.2403823284911,28.0522261861379,29.0409761123334,51.7879362991561,39.3132598581239,46.0959052301694,37.0733851875859,33.9502130765126,38.1778886448852,32.139691523987,27.4225572983357,82.7781092862114,55.5971875693389,44.3396832893151,48.6614525989216,40.0388038884861,35.8699731517832,29.6326276427439,36.6223050946027,108.140830846238,98.0495526107065,77.2924718356012,41.4251545071004,35.6479611171266,36.732660538047,33.3810077175146,25.7761143589099,24.6827380619805,21.6256568617879,24.681152928765,25.8051406631445,19.7471819896177,20.3567655458078,17.99727571918,14.3275987676826,21.2963611832319,19.0573114639728,32.5949420274397,48.7767862677808,11.5646574044329,35.7008264995785,53.5353508843437,42.4993109504602,50.7737797609048,40.5383884492919,36.6923772344036,28.3436182907713,19.9302205848695,30.469306623942,23.6255096272253,27.4559931416788,26.9050440224386,31.4586793028978,23.342909386467,19.1175622324193,98.4376405946494,45.0139139682332,36.0664754153857,40.1193115855269,36.269115100346,35.2783174048302,25.0416687012059,22.7319627888587,20.5668333472201,21.7179008502369,22.2339470315362,58.562632106349,53.267487675678,53.5171827475952,41.3834647632546,29.9059678092997,29.5365988066447,25.6049562331221,34.2105328495325,25.2596500133035,57.5072826109418,21.2120340171047,19.3463357331028,20.9640468696103,15.7869723899283,15.4381926836277,28.4519912856571,42.2565848248181,51.8228625085642,46.000918245076,38.4892007193143,33.1662389734795,24.5184950112594,25.5625078693716,30.8964882448134,31.6694506197748,24.874943910568,25.8904037250866,21.9309926969687,22.9992003144603,24.1266054302836,23.3879444042045,29.9976206541612,28.9733583619969,25.2064426280833,21.6841620195576,32.9509240207118,21.4600288123717,35.9679370134533,38.6534356853672,37.2682478077742,42.0585084396492,34.0881971346063,32.5538010407157,31.1704240289669,35.3629588072687,31.2277344577754,33.4174169078679,37.6141225801912,33.476333489444,36.3237919358475,28.5398312742486,25.2215762845929,57.5390107687306,48.0694455573954,36.966595632156,31.8926044311235,28.8989039067292,24.550687850981,22.1755574981278,26.7373033788541,28.4433082142234,15.8127912862498,15.470331487228,33.703520969625,37.9928908406065,47.3452782644882,34.5082626400864,36.1774076630238,34.0684441619955,24.6823530903181,33.7956093517205,38.0168167063211,27.3263371414328,22.0528398054962,50.9498521589173,37.4597469934501,33.1117957855576,32.8273946008625,38.2448296405993,23.3184669303881,26.3303928854924,39.3003025835061,37.3560231013433,51.6692731361496,43.7014820250883,45.2457893756593,28.5972716508153,56.2628603279661,54.441114953903,58.043988997858,33.413471630529,56.3078068574421,37.4107819513402,32.9416289506494,32.6177741782571,32.9727471256728,28.0517840480427,29.4246302382196,16.4906243449939,19.0534010738935,21.1255366449555,45.0954350947352,44.4064141750617,37.8899943146754,31.8899948884238,29.0609602824895,29.3983658353954,37.7890308439328,31.249052362548,34.3938649716332,39.136627573813,37.4439008135225,45.8216124910858,43.5859212873853,50.7392128394247,52.8777749519626,49.9484480912273,48.6769319214099,38.9433256444699,44.011479098024,43.6175063775998,41.0754687870449,41.2379097209678,37.9111156077637,30.9802130081861,33.3099171217471,22.6730383615211,85.908563955763,101.825227251755,82.5992312511266,27.6261119466032,27.5893238913238,34.4325053622458,31.9408884827808,24.0754609936974,28.2375921308533,23.0162618253588,33.8008352929244,19.5912627871804,22.6077231524312,24.9279986138601,25.6508550088086,30.1715206160228,26.7354021300681,26.4057758993428,56.1489550430396,59.0556812633526,44.7322047075832,36.9522209943807,33.3284928578492,25.0027171492019,27.7808409752019,31.7293988147897,34.9801938455079,26.2805100234349,32.9523089857312,27.9166985251393,29.1225088231334,27.5948406864987,27.9710733813837,24.2909782554368,24.3357084484197,26.2356539830639,28.8460130562315,26.9374023845947,28.8010172003749,22.5394273822359,23.6051828047848,23.8368123277019,25.5977514729699,20.8151935413524,25.7928441750609,30.2530168153519,29.0620803630144,29.1793981262024,21.7102083167239,25.1186430057687,27.8277109355389,23.0855893367089,25.0778594275484,31.9757539760571,25.0306821036587,30.941431782955,40.361838066526,26.9121531325809,30.1428186306548
|short_description=p1@Smn1
}}

Revision as of 12:43, 5 August 2015

Short description:p1@Smn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smn1_5end
Coexpression cluster:MCL_coexpression_mm9:268
Association with transcript: 0bp_to_ENSMUST00000022147, ENSMUST00000134514, ENSMUST00000140745, NM_011420, uc007rqg.1, uc007rqh.1, uc011zdp.1_5end
EntrezGene:20595
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.80
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I826.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E925.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E740.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F234.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E688.18
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1100.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E426.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E831.03
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A133.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A337.46
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A530.08
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A238.33
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A634.38
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A328.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H232.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I936.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D128.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D222.48
GP2+ M cell, pool1.CNhs13228.11845-124H910.91
GP2+ M cell, pool2.CNhs13231.11846-124I115.94
GP2+ M cell, pool3.CNhs13240.11847-124I220.69
Ileum epithelium, pool1.CNhs13199.10252-104B920.14
Ileum epithelium, pool2.CNhs13232.10253-104C120.41
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C837.25
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I353.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G640.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F533.22
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F637.90
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F732.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G839.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H145.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H344.50
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G934.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H243.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H427.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D841.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D935.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B338.91
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B749.29
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C230.52
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B831.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C324.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C431.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C433.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A223.15
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I916.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A128.90
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C131.90
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E119.77
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C529.91
Mouse Granule cells, donor1.CNhs12131.11713-123C347.95
Mouse Granule cells, donor2.CNhs12357.11731-123E351.84
Mouse Granule cells, donor3.CNhs12108.11636-122C738.66
Mouse Meningeal cells, donor1.CNhs12132.11716-123C634.22
Mouse Meningeal cells, donor3.CNhs12109.11639-122D130.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C725.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E731.64
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D227.00
Mouse Microglia, donor1.CNhs12629.11718-123C826.66
Mouse Microglia, donor2.CNhs12634.11736-123E829.97
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D540.02
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F542.66
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D935.97
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F130.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D530.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D244.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F254.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D649.64
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D449.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F450.96
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.78
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.87
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.24
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E134.48
Mouse Schwann, donor1.CNhs12507.11728-123D939.76
Mouse Schwann, donor2.CNhs12573.11746-123F929.47
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G332.46
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C437.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F415.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.23
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I747.89
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E341.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I844.52
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G626.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H126.95
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G143.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G238.26
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G339.43
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B622.15
accessory axillary lymph node, adult.CNhs10475.1063-29H964.48
adrenal gland, adult.CNhs10508.49-24D728.50
adrenal gland, embryo E14.CNhs11038.406-44C534.18
adrenal gland, embryo E16.CNhs11004.1254-43D630.14
adrenal gland, embryo E17.CNhs11043.1263-45I130.44
adrenal gland, embryo E18.CNhs11026.1262-18F527.13
adrenal gland, neonate N00.CNhs11191.1311-23C132.92
adrenal gland, neonate N25.CNhs11223.1377-27I323.12
amnion, adult pregnant day17.5.CNhs10488.583-22A831.15
aorta, adult.CNhs10498.46-23H125.02
bone (os femoris), adult.CNhs10483.56-12G250.42
bone (os femoris), neonate N02.CNhs11227.1985-43F529.12
bone (os femoris), neonate N16.CNhs11225.1525-43A628.71
bone (os femoris), neonate N20.CNhs11195.1350-25C329.58
cecum, adult.CNhs10467.37-13H452.19
cerebellum, adult.CNhs10494.15-8B224.30
cerebellum, neonate N30.CNhs11135.1395-42I222.20
colon, adult.CNhs10468.36-18H723.76
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C761.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D193.58
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D467.60
corpora quadrigemina, adult.CNhs10501.16-22A430.86
corpus striatum, adult.CNhs10487.19-21D827.45
corpus striatum, neonate N00.CNhs11226.630-43F140.71
cortex, adult.CNhs10473.12-14D531.98
cortex, neonate N30.CNhs11107.1392-42F223.27
diencephalon, adult.CNhs10482.20-12F225.97
diencephalon, neonate N30.CNhs11201.1388-42B224.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B134.42
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A228.24
epididymis, adult.CNhs10490.58-23B228.05
eyeball, adult.CNhs10484.31-12G429.04
eyeball, embryo E12.CNhs11016.345-16C651.79
eyeball, embryo E14.CNhs10521.399-16E239.31
eyeball, embryo E15.CNhs10593.426-16C946.10
eyeball, embryo E17.CNhs11023.1261-18D437.07
eyeball, neonate N00.CNhs11207.633-15C633.95
eyeball, neonate N01.CNhs11140.1532-43E738.18
eyeball, neonate N02.CNhs11205.1551-44G832.14
eyeball, neonate N16.CNhs11188.777-19A227.42
forelimb, embryo E11.CNhs10596.335-25E282.78
forelimb, embryo E12.CNhs10600.359-14H255.60
forelimb, embryo E13.CNhs10589.384-1E244.34
forelimb, embryo E14.CNhs10577.413-26A848.66
forelimb, embryo E15.CNhs11007.437-20E740.04
forelimb, embryo E17.CNhs10598.1517-43C435.87
forelimb, embryo E18.CNhs11008.1520-43B529.63
gonad, embryo E13.CNhs11044.1564-45I636.62
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8108.14
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D298.05
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D577.29
heart, embryo E11.CNhs10586.331-24E941.43
heart, embryo E12.CNhs11015.353-12F535.65
heart, embryo E13.CNhs11013.376-3I936.73
heart, embryo E14.CNhs10597.403-26D433.38
heart, embryo E15.CNhs11017.431-16C825.78
heart, embryo E16.CNhs11021.457-17C624.68
heart, embryo E17.CNhs11025.479-18E521.63
heart, embryo E18.CNhs11030.1283-20G324.68
heart, neonate N00.CNhs11213.639-21E325.81
heart, neonate N03.CNhs11221.1349-25I219.75
heart, neonate N10.CNhs11118.749-24G120.36
heart, neonate N16.CNhs11209.782-15G118.00
heart, neonate N20.CNhs11127.821-26I614.33
heart, neonate N25.CNhs11196.1351-25D321.30
heart, neonate N30.CNhs11202.1390-42D219.06
hippocampus, adult.CNhs10478.13-16E832.59
hippocampus, neonate N00.CNhs11228.627-43G148.78
intestinal mucosa, adult.CNhs10506.860-29I311.56
intestine, adult.CNhs10496.178-9A335.70
intestine, embryo E12.CNhs11019.1251-16I553.54
intestine, embryo E13.CNhs11010.381-16D542.50
intestine, embryo E15.CNhs10602.976-16D850.77
intestine, embryo E16.CNhs10585.463-22H440.54
intestine, embryo E17.CNhs10582.482-18D336.69
intestine, embryo E18.CNhs10526.1289-20F728.34
intestine, neonate N00.CNhs11126.644-26D119.93
intestine, neonate N01.CNhs11192.1322-23E930.47
intestine, neonate N06.CNhs11102.688-20B823.63
intestine, neonate N07.CNhs11095.720-20F227.46
intestine, neonate N10.CNhs11098.755-23A526.91
intestine, neonate N20.CNhs11187.827-18D131.46
intestine, neonate N25.CNhs11121.1352-25E323.34
intestine, neonate N30.CNhs11131.1384-42G119.12
kidney, embryo E14.CNhs10606.411-4I998.44
kidney, embryo E15.CNhs10997.434-16F845.01
kidney, embryo E16.CNhs10584.464-22A536.07
kidney, embryo E17.CNhs11028.483-18I240.12
kidney, embryo E18.CNhs11001.1288-20C736.27
kidney, neonate N00.CNhs11214.646-21G735.28
kidney, neonate N10.CNhs11206.758-6D525.04
kidney, neonate N20.CNhs11113.832-19I122.73
kidney, neonate N25.CNhs11122.1353-25F320.57
kidney, neonate N30.CNhs11203.1385-42H121.72
liver, adult pregnant day01.CNhs10466.508-5B222.23
liver, embryo E12.CNhs10601.355-15F858.56
liver, embryo E13.CNhs10524.378-3H653.27
liver, embryo E14.CNhs10594.409-16E153.52
liver, embryo E15.CNhs10520.433-16D741.38
liver, embryo E16.CNhs10523.462-17F529.91
liver, embryo E17.CNhs10510.481-18A329.54
liver, embryo E18.CNhs10579.499-43G425.60
liver, neonate N00.CNhs11117.641-24F434.21
liver, neonate N03.CNhs11123.1345-25G225.26
liver, neonate N06.CNhs11101.684-20A857.51
liver, neonate N07.CNhs11103.716-20H221.21
liver, neonate N10.CNhs11115.751-24B919.35
liver, neonate N20.CNhs11220.823-25A320.96
liver, neonate N25.CNhs11198.1368-26H115.79
liver, neonate N30.CNhs11106.1382-42D115.44
lung, adult.CNhs10474.28-22B128.45
lung, embryo E12.CNhs10522.354-16G242.26
lung, embryo E14.CNhs10604.404-26F851.82
lung, embryo E15.CNhs11020.432-17C546.00
lung, embryo E16.CNhs10998.458-17B638.49
lung, embryo E17.CNhs10605.480-44A633.17
lung, embryo E18.CNhs10583.1287-20I624.52
lung, neonate N00.CNhs11224.640-42C625.56
lung, neonate N06.CNhs11212.683-20E530.90
lung, neonate N07.CNhs11111.715-19A331.67
lung, neonate N10.CNhs11219.750-23E624.87
lung, neonate N20.CNhs11109.822-18A425.89
lung, neonate N25.CNhs11119.1359-25C721.93
lung, neonate N30.CNhs11133.1394-42H223.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.39
mammary gland, adult lactating day02.CNhs10480.595-22B630.00
mammary gland, adult pregnant day19.CNhs10476.588-5H228.97
medulla oblongata, adult.CNhs10477.17-12C225.21
medulla oblongata, neonate N30.CNhs11200.1396-42A321.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C732.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C221.46
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E135.97
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E238.65
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E337.27
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D742.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D834.09
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D932.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D431.17
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D535.36
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D631.23
olfactory brain, adult.CNhs10489.18-22I933.42
ovary, adult.CNhs10507.91-2I737.61
ovary, embryo E18.CNhs11040.505-44H733.48
ovary, neonate N00.CNhs11217.1299-22I436.32
oviduct, adult pregnant day01.CNhs10500.988-6G628.54
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F457.54
pancreas, embryo E15.CNhs11042.1556-45F248.07
pancreas, embryo E16.CNhs11003.460-26E536.97
pancreas, embryo E17.CNhs10599.1558-45G331.89
pancreas, embryo E18.CNhs10580.1535-43I728.90
pancreas, neonate N00.CNhs11105.645-26G924.55
pancreas, neonate N01.CNhs11138.1531-43D722.18
pancreas, neonate N02.CNhs11139.1539-43D826.74
pancreas, neonate N16.CNhs11136.787-43B628.44
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G833.70
pituitary gland, embryo E12.CNhs11018.346-16E637.99
pituitary gland, embryo E13.CNhs11009.370-44C747.35
pituitary gland, embryo E14.CNhs11037.398-44A534.51
pituitary gland, embryo E15.CNhs10592.427-16B936.18
pituitary gland, embryo E16.CNhs11036.449-43F634.07
pituitary gland, embryo E17.CNhs11039.1265-44F524.68
pituitary gland, neonate N00.CNhs11190.1308-22E933.80
placenta, adult pregnant day10.CNhs10472.539-13I738.02
placenta, adult pregnant day17.CNhs10464.577-18G327.33
prostate, adult.CNhs10470.859-1F822.05
skin, adult.CNhs10492.30-1C350.95
skin, neonate N00.CNhs11124.650-25G437.46
skin, neonate N03.CNhs11215.662-22H333.11
skin, neonate N06.CNhs11097.693-20I532.83
skin, neonate N10.CNhs11108.762-6C438.24
small intestine, neonate N16.CNhs11114.790-21I123.32
spinal cord, adult.CNhs10505.24-13C926.33
spleen, adult.CNhs10465.25-2G239.30
spleen, embryo E16.CNhs11035.461-43C137.36
spleen, embryo E18.CNhs11011.1271-21F251.67
spleen, neonate N10.CNhs11116.752-24D143.70
spleen, neonate N20.CNhs11112.824-19H145.25
spleen, neonate N25.CNhs11099.1354-25G328.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C656.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C954.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D358.04
stomach, adult.CNhs10503.33-1H633.41
stomach, embryo E12.CNhs10588.356-43E356.31
stomach, embryo E15.CNhs10603.1252-16G837.41
stomach, embryo E16.CNhs11022.459-17D432.94
stomach, embryo E17.CNhs11006.1035-18D532.62
stomach, embryo E18.CNhs10999.1286-20C632.97
stomach, neonate N03.CNhs11193.1340-24B828.05
stomach, neonate N07.CNhs11210.718-18A929.42
stomach, neonate N25.CNhs11104.1355-25E416.49
stomach, neonate N30.CNhs11134.1386-42I119.05
submandibular gland, adult.CNhs10469.59-29C121.13
testis, adult.CNhs10504.57-7G545.10
testis, embryo E13.CNhs11031.389-23F544.41
testis, embryo E15.CNhs11034.443-27C537.89
testis, embryo E16.CNhs11033.470-26G531.89
testis, embryo E17.CNhs11029.486-18I529.06
testis, embryo E18.CNhs11027.503-18G529.40
testis, neonate N00.CNhs11189.1300-22B737.79
testis, neonate N07.CNhs11222.726-26I431.25
testis, neonate N10.CNhs11204.763-44D934.39
testis, neonate N20.CNhs11110.839-18H339.14
testis, neonate N30.CNhs11130.1391-42E237.44
thymus, adult.CNhs10471.38-12B545.82
thymus, embryo E14.CNhs11041.402-44I443.59
thymus, embryo E15.CNhs11005.430-45I250.74
thymus, embryo E16.CNhs11002.456-26C552.88
thymus, embryo E17.CNhs10581.478-18C149.95
thymus, embryo E18.CNhs10595.1273-19G448.68
thymus, neonate N02.CNhs11181.1541-43F838.94
thymus, neonate N03.CNhs11137.2104-43C744.01
thymus, neonate N06.CNhs11197.681-26C443.62
thymus, neonate N07.CNhs11211.713-19D341.08
thymus, neonate N10.CNhs11194.748-24E441.24
thymus, neonate N20.CNhs11186.820-7A237.91
thymus, neonate N25.CNhs11125.1362-25G730.98
thymus, neonate N30.CNhs11132.1393-42G233.31
tongue, adult.CNhs10499.32-1B422.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H385.91
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7101.83
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G582.60
urinary bladder, adult.CNhs10481.879-12E427.63
uterus, adult pregnant day19.CNhs10497.590-15F527.59
uterus, adult.CNhs10509.92-27E534.43
vagina, adult.CNhs10502.89-27D531.94
vesicular gland, adult.CNhs10491.51-27F824.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.24
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A333.80
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A625.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.74
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.41
whole body, embryo E11.CNhs11014.324-5I856.15
whole body, embryo E12.CNhs10587.857-27C959.06
whole body, embryo E13.CNhs10512.372-23H244.73
whole body, embryo E14.5.CNhs10578.420-27D236.95
whole body, embryo E14.CNhs10519.395-14B133.33
whole body, embryo E16.CNhs10514.453-14F225.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G527.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G531.73
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G534.98
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.28
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G532.95
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G527.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G529.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G527.97
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G524.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G524.34
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G526.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G528.85
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G526.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G528.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.54
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G523.61
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G523.84
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G525.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G525.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G530.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G529.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.18
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G525.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G523.09
whole body, embryo E17.5.CNhs10513.490-9F925.08
whole body, embryo E17.CNhs10517.475-3I531.98
whole body, embryo E18.CNhs10516.493-3B325.03
whole body, neonate N00.CNhs10525.657-19C230.94
whole body, neonate N01.CNhs10576.659-23C640.36
whole body, neonate N06.CNhs10515.692-21D126.91
whole body, neonate N10.CNhs10518.761-6B430.14





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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