FFCP PHASE1:Mm9::chr12:99497626..99497656,-: Difference between revisions
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{{FFCP|EntrezGene=14420|HGNC=|UniProt=P54818|association_with_transcript=12bp_to_ENSMUST00000021390_5end|description=CAGE_peak_3_at_Galc_5end|id=chr12:99497626..99497656,-|ontology_enrichment_celltype=CL:0000117!3.26e-10!23;CL:0000337!3.26e-10!23;CL:0000221!5.31e-10!44;CL:0000133!5.31e-10!44;CL:0000540!6.82e-10!33;CL:0000047!6.82e-10!33;CL:0000031!6.82e-10!33;CL:0000404!6.82e-10!33;CL:0002319!1.16e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.50e-10,23;CL:0000337,2.50e-10,23;CL:0000221,5.10e-10,44;CL:0000133,5.10e-10,44;CL:0000540,6.76e-10,33;CL:0000047,6.76e-10,33;CL:0000031,6.76e-10,33;CL:0000404,6.76e-10,33;CL:0002319,1.12e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.74e-26!73;UBERON:0005743!1.74e-26!73;UBERON:0000073!1.04e-25!75;UBERON:0001016!1.04e-25!75;UBERON:0000033!3.23e-23!63;UBERON:0000955!8.69e-23!50;UBERON:0006238!8.69e-23!50;UBERON:0001049!1.68e-22!52;UBERON:0005068!1.68e-22!52;UBERON:0006241!1.68e-22!52;UBERON:0007135!1.68e-22!52;UBERON:0002616!4.22e-22!49;UBERON:0004121!8.61e-22!102;UBERON:0000924!8.61e-22!102;UBERON:0006601!8.61e-22!102;UBERON:0002346!8.06e-20!71;UBERON:0003075!8.06e-20!71;UBERON:0007284!8.06e-20!71;UBERON:0003080!1.57e-19!40;UBERON:0002780!4.08e-19!39;UBERON:0001890!4.08e-19!39;UBERON:0006240!4.08e-19!39;UBERON:0003056!6.72e-19!49;UBERON:0002020!1.99e-16!34;UBERON:0002791!2.11e-15!29;UBERON:0003528!2.11e-15!29;UBERON:0001893!2.11e-15!29;UBERON:0000153!1.94e-12!94;UBERON:0007811!3.22e-12!86;UBERON:0000956!1.17e-11!21;UBERON:0001869!1.17e-11!21;UBERON:0000203!1.17e-11!21;UBERON:0002619!2.81e-09!17;UBERON:0004111!2.00e-07!122;UBERON:0002021!3.47e-07!10;UBERON:0000411!3.47e-07!10;UBERON:0001950!3.47e-07!10;UBERON:0000025!5.23e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.10e-26,73;UBERON:0001016,6.66e-26,75;UBERON:0000073,1.14e-23,54;UBERON:0001049,8.88e-23,52;UBERON:0005068,8.88e-23,52;UBERON:0006241,8.88e-23,52;UBERON:0007135,8.88e-23,52;UBERON:0004121,1.25e-22,95;UBERON:0000924,1.25e-22,95;UBERON:0006601,1.25e-22,95;UBERON:0000955,1.69e-21,47;UBERON:0006238,1.69e-21,47;UBERON:0002346,1.73e-21,64;UBERON:0003075,1.73e-21,64;UBERON:0007284,1.73e-21,64;UBERON:0002616,8.17e-21,46;UBERON:0003080,9.09e-20,40;UBERON:0002780,2.39e-19,39;UBERON:0001890,2.39e-19,39;UBERON:0006240,2.39e-19,39;UBERON:0003056,3.97e-19,49;UBERON:0010371,5.49e-19,73;UBERON:0010314,1.59e-17,92;UBERON:0002020,1.27e-16,34;UBERON:0003528,1.39e-15,29;UBERON:0002791,1.39e-15,29;UBERON:0001893,1.39e-15,29;UBERON:0000956,8.62e-12,21;UBERON:0001869,8.62e-12,21;UBERON:0000203,8.62e-12,21;UBERON:0002619,2.22e-09,17;UBERON:0004111,1.39e-07,122;UBERON:0002021,2.92e-07,10;UBERON:0000411,2.92e-07,10;UBERON:0001950,2.92e-07,10;UBERON:0000025,4.62e-07,114|phase1_expression=4.48416771893423,0,0,0,0,0.671517087647559,0.467225281191051,1.42035655785734,1.12630977721333,0.936258105287974,1.54096171402954,0.717949430958028,0.856003649656029,1.22388563386596,0,0.404950534779652,0,0.473193248037357,0.548457734422955,0,3.40173160604279,0.0992909512008853,0,0.47997726838022,0.22940928106717,0.57423196411502,0,0.430942465371778,0.190023419456374,0.756090389279792,0.221730510655305,1.90509202037889,1.23012957516914,0,1.44425809875637,1.16364251750945,1.22501613757421,3.76678467663217,0.7813353445238,4.71171369576418,4.70585190424811,6.14740936462601,4.85510353031154,1.38486499773135,0.912392380975631,0.734187008646726,1.56478268869608,2.61630187656536,2.19686182734472,3.4997381833371,3.3596741190087,4.31257693094915,0.167782606057736,0,2.01656279485478,0.514518872071894,0.286533439938757,0,3.84401275633236,3.1739458756322,5.07065122804943,0.677689064138264,0,1.3498495759221,0.988866362566974,1.4209602298922,1.79760066311043,3.45796474789399,5.28817022773236,6.34527910158946,5.25812403378455,3.14216082844184,3.75476519617743,5.26710436624302,3.92966431174769,4.5960939330501,3.30347642998166,6.76742891851495,6.14426133024974,5.14356522147756,5.12330804173494,3.64639359389732,4.4669279840221,4.50210088025344,5.19514042441154,3.24091444021034,5.83723891276322,2.79599168737951,1.81742863999642,1.66257432234928,1.44932244350839,1.72084775396277,0,0,0,1.34408066129201,0.842666520790511,1.1930122580464,1.03914401841148,2.12003744706204,3.94361575374705,2.56652954828636,0,0,2.38140145112336,2.53359865475099,2.02209778005913,1.02765491747154,0.776813650941515,2.22663208597237,1.38788261412909,1.82679286987285,2.99800146432876,2.41156224884196,1.99900802130698,1.63366568728578,0.741584903203122,1.01219549843938,0.884610551949874,0.647067399789637,1.54589062922275,1.45462575940567,3.72783522436244,4.09893115816166,3.14170060220183,0.510914110417183,0.838705871541442,1.19980546198682,0.635351135365324,4.19413790333504,6.8625090422794,3.8952849154988,7.30062144807561,7.92717917724025,6.64921742590592,4.86723789203273,3.1570202793598,2.73695335342205,2.27450482590307,1.68353484709179,3.3831315170303,4.13823787980251,2.70093194708024,3.16480117455002,2.4493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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14420 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P54818 | |||
|association_with_transcript=12bp_to_ENSMUST00000021390_5end | |||
|cluster_id=chr12:99497626..99497656,- | |||
|description=CAGE_peak_3_at_Galc_5end | |||
|id=chr12:99497626..99497656,- | |||
|ontology_enrichment_celltype=CL:0000117!3.26e-10!23;CL:0000337!3.26e-10!23;CL:0000221!5.31e-10!44;CL:0000133!5.31e-10!44;CL:0000540!6.82e-10!33;CL:0000047!6.82e-10!33;CL:0000031!6.82e-10!33;CL:0000404!6.82e-10!33;CL:0002319!1.16e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.50e-10,23;CL:0000337,2.50e-10,23;CL:0000221,5.10e-10,44;CL:0000133,5.10e-10,44;CL:0000540,6.76e-10,33;CL:0000047,6.76e-10,33;CL:0000031,6.76e-10,33;CL:0000404,6.76e-10,33;CL:0002319,1.12e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.74e-26!73;UBERON:0005743!1.74e-26!73;UBERON:0000073!1.04e-25!75;UBERON:0001016!1.04e-25!75;UBERON:0000033!3.23e-23!63;UBERON:0000955!8.69e-23!50;UBERON:0006238!8.69e-23!50;UBERON:0001049!1.68e-22!52;UBERON:0005068!1.68e-22!52;UBERON:0006241!1.68e-22!52;UBERON:0007135!1.68e-22!52;UBERON:0002616!4.22e-22!49;UBERON:0004121!8.61e-22!102;UBERON:0000924!8.61e-22!102;UBERON:0006601!8.61e-22!102;UBERON:0002346!8.06e-20!71;UBERON:0003075!8.06e-20!71;UBERON:0007284!8.06e-20!71;UBERON:0003080!1.57e-19!40;UBERON:0002780!4.08e-19!39;UBERON:0001890!4.08e-19!39;UBERON:0006240!4.08e-19!39;UBERON:0003056!6.72e-19!49;UBERON:0002020!1.99e-16!34;UBERON:0002791!2.11e-15!29;UBERON:0003528!2.11e-15!29;UBERON:0001893!2.11e-15!29;UBERON:0000153!1.94e-12!94;UBERON:0007811!3.22e-12!86;UBERON:0000956!1.17e-11!21;UBERON:0001869!1.17e-11!21;UBERON:0000203!1.17e-11!21;UBERON:0002619!2.81e-09!17;UBERON:0004111!2.00e-07!122;UBERON:0002021!3.47e-07!10;UBERON:0000411!3.47e-07!10;UBERON:0001950!3.47e-07!10;UBERON:0000025!5.23e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.10e-26,73;UBERON:0001016,6.66e-26,75;UBERON:0000073,1.14e-23,54;UBERON:0001049,8.88e-23,52;UBERON:0005068,8.88e-23,52;UBERON:0006241,8.88e-23,52;UBERON:0007135,8.88e-23,52;UBERON:0004121,1.25e-22,95;UBERON:0000924,1.25e-22,95;UBERON:0006601,1.25e-22,95;UBERON:0000955,1.69e-21,47;UBERON:0006238,1.69e-21,47;UBERON:0002346,1.73e-21,64;UBERON:0003075,1.73e-21,64;UBERON:0007284,1.73e-21,64;UBERON:0002616,8.17e-21,46;UBERON:0003080,9.09e-20,40;UBERON:0002780,2.39e-19,39;UBERON:0001890,2.39e-19,39;UBERON:0006240,2.39e-19,39;UBERON:0003056,3.97e-19,49;UBERON:0010371,5.49e-19,73;UBERON:0010314,1.59e-17,92;UBERON:0002020,1.27e-16,34;UBERON:0003528,1.39e-15,29;UBERON:0002791,1.39e-15,29;UBERON:0001893,1.39e-15,29;UBERON:0000956,8.62e-12,21;UBERON:0001869,8.62e-12,21;UBERON:0000203,8.62e-12,21;UBERON:0002619,2.22e-09,17;UBERON:0004111,1.39e-07,122;UBERON:0002021,2.92e-07,10;UBERON:0000411,2.92e-07,10;UBERON:0001950,2.92e-07,10;UBERON:0000025,4.62e-07,114 | |||
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| |||
|short_description=p3@Galc | |||
}} |
Revision as of 11:55, 5 August 2015
Short description: | p3@Galc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Galc_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENSMUST00000021390_5end |
EntrezGene: | 14420 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.50e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.50e-10 | 23 |
ectodermal cell | 5.10e-10 | 44 |
neurectodermal cell | 5.10e-10 | 44 |
neuron | 6.76e-10 | 33 |
neuronal stem cell | 6.76e-10 | 33 |
neuroblast | 6.76e-10 | 33 |
electrically signaling cell | 6.76e-10 | 33 |
neural cell | 1.12e-09 | 43 |