FFCP PHASE1:Mm9::chr4:43394906..43394956,+: Difference between revisions
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{{FFCP|EntrezGene=100213|HGNC=|MCL_coexpression_id=1|UniProt=B0R001|association_with_transcript=0bp_to_ENSMUST00000131037,ENSMUST00000144911_5end|description=CAGE_peak_2_at_Rusc2_5end|id=chr4:43394906..43394956,+|ontology_enrichment_celltype=CL:0000055!2.51e-12!50;CL:0002319!7.68e-12!43;CL:0000117!1.61e-11!23;CL:0000337!1.61e-11!23;CL:0000221!3.41e-11!44;CL:0000133!3.41e-11!44;CL:0000393!4.58e-10!39;CL:0000211!4.58e-10!39;CL:0000540!8.00e-10!33;CL:0000047!8.00e-10!33;CL:0000031!8.00e-10!33;CL:0000404!8.00e-10!33;CL:0002321!2.23e-07!70;CL:0000220!2.23e-07!70|ontology_enrichment_celltype_v019_2=CL:0002319,6.65e-12,43;CL:0000117,1.40e-11,23;CL:0000337,1.40e-11,23;CL:0000221,2.98e-11,44;CL:0000133,2.98e-11,44;CL:0000393,4.06e-10,39;CL:0000211,4.06e-10,39;CL:0000540,7.13e-10,33;CL:0000047,7.13e-10,33;CL:0000031,7.13e-10,33;CL:0000404,7.13e-10,33;CL:0002321,1.34e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.78e-23!75;UBERON:0001016!1.78e-23!75;UBERON:0001017!1.15e-22!73;UBERON:0005743!1.15e-22!73;UBERON:0004121!4.12e-19!102;UBERON:0000924!4.12e-19!102;UBERON:0006601!4.12e-19!102;UBERON:0001049!6.10e-19!52;UBERON:0005068!6.10e-19!52;UBERON:0006241!6.10e-19!52;UBERON:0007135!6.10e-19!52;UBERON:0000955!1.11e-18!50;UBERON:0006238!1.11e-18!50;UBERON:0002616!4.46e-18!49;UBERON:0000025!2.18e-17!114;UBERON:0002020!3.58e-17!34;UBERON:0004111!1.47e-16!122;UBERON:0002791!4.82e-15!29;UBERON:0003528!4.82e-15!29;UBERON:0001893!4.82e-15!29;UBERON:0002346!6.05e-15!71;UBERON:0003075!6.05e-15!71;UBERON:0007284!6.05e-15!71;UBERON:0000033!2.23e-14!63;UBERON:0003080!2.69e-13!40;UBERON:0002780!1.07e-12!39;UBERON:0001890!1.07e-12!39;UBERON:0006240!1.07e-12!39;UBERON:0000956!2.71e-11!21;UBERON:0001869!2.71e-11!21;UBERON:0000203!2.71e-11!21;UBERON:0003056!4.16e-11!49;UBERON:0002619!1.68e-09!17;UBERON:0000468!3.19e-09!333;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.31e-23,75;UBERON:0001017,8.55e-23,73;UBERON:0000073,1.76e-20,54;UBERON:0004121,6.48e-20,95;UBERON:0000924,6.48e-20,95;UBERON:0006601,6.48e-20,95;UBERON:0001049,4.78e-19,52;UBERON:0005068,4.78e-19,52;UBERON:0006241,4.78e-19,52;UBERON:0007135,4.78e-19,52;UBERON:0002020,2.88e-17,34;UBERON:0000025,4.84e-17,114;UBERON:0000955,9.10e-17,47;UBERON:0006238,9.10e-17,47;UBERON:0004111,2.74e-16,122;UBERON:0002616,3.54e-16,46;UBERON:0002346,6.19e-16,64;UBERON:0003075,6.19e-16,64;UBERON:0007284,6.19e-16,64;UBERON:0010314,2.93e-15,92;UBERON:0003528,3.99e-15,29;UBERON:0002791,3.99e-15,29;UBERON:0001893,3.99e-15,29;UBERON:0010371,8.31e-14,73;UBERON:0003080,2.28e-13,40;UBERON:0002780,9.17e-13,39;UBERON:0001890,9.17e-13,39;UBERON:0006240,9.17e-13,39;UBERON:0000956,2.36e-11,21;UBERON:0001869,2.36e-11,21;UBERON:0000203,2.36e-11,21;UBERON:0003056,3.64e-11,49;UBERON:0002619,1.50e-09,17;UBERON:0002021,1.83e-07,10;UBERON:0000411,1.83e-07,10;UBERON:0001950,1.83e-07,10|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,0.809901069559304,0.699561878128147,0.157731082679119,0.274228867211478,0,12.161190491603,0.0992909512008853,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0.498703936075477,1.22501613757421,0,0,0,0,0,0,6.42073771675444,6.89363132292699,5.87349606917381,8.60630478782843,9.15705656797875,9.44650585758229,9.52706505463989,5.73944328663986,11.5002051491977,0,0,0,6.68874533693462,5.73066879877513,11.8604581223812,12.5436205732951,12.6957835025288,25.9870875437533,5.42151251310611,5.33576877666684,17.0980946283466,22.7439263390404,17.7620028736525,8.08920298399693,9.60545763303886,13.0648911508682,12.0155285115205,15.1433972172995,18.852964970651,12.589506834242,11.5141351262057,14.2809751817172,12.8690630125403,28.6301290598411,29.6234624357635,28.417208652405,14.9031505135119,21.0421580285542,10.4182674111352,25.684835908127,13.5063026407603,24.90611438762,13.258286346315,11.8168495063255,15.6575534493252,11.6618337733103,11.9403064968721,15.9425468785923,8.60423876981386,5.439770669662,4.85732872474035,9.09686984426737,7.16843019355737,5.05599912474307,5.11290967734173,3.37721805983729,2.82671659608272,1.54927761754349,14.115912515575,48.4129955442627,7.11066703153331,5.84525810730278,5.32055717497707,7.07734223020697,3.9964357901671,4.40194402200192,10.5393918736026,2.4287945747259,3.04465478312141,4.38169444786511,4.37095657602605,6.34979018532806,8.67099480174761,21.7531571606249,13.3031408366319,4.42305275974937,6.63244084784378,6.8460870722722,2.42437626567611,5.59175283654366,38.9398460025358,37.7004072264219,2.81002760729451,0.479260498023681,0.599902730993408,0.381210681219194,26.8125244534633,16.4700217014706,14.827213549318,28.6810128317256,21.4800984157478,25.3501414362663,19.7934340942664,6.00852246716866,3.11017426525233,2.52722758433675,9.04899980311838,2.47228841629137,1.83921683546778,4.50155324513373,3.16480117455002,5.98721192531685,3.45907044769094,4.49768277886698,11.641651683255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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100213 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B0R001 | |||
|association_with_transcript=0bp_to_ENSMUST00000131037,ENSMUST00000144911_5end | |||
|cluster_id=chr4:43394906..43394956,+ | |||
|description=CAGE_peak_2_at_Rusc2_5end | |||
|id=chr4:43394906..43394956,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.51e-12!50;CL:0002319!7.68e-12!43;CL:0000117!1.61e-11!23;CL:0000337!1.61e-11!23;CL:0000221!3.41e-11!44;CL:0000133!3.41e-11!44;CL:0000393!4.58e-10!39;CL:0000211!4.58e-10!39;CL:0000540!8.00e-10!33;CL:0000047!8.00e-10!33;CL:0000031!8.00e-10!33;CL:0000404!8.00e-10!33;CL:0002321!2.23e-07!70;CL:0000220!2.23e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.65e-12,43;CL:0000117,1.40e-11,23;CL:0000337,1.40e-11,23;CL:0000221,2.98e-11,44;CL:0000133,2.98e-11,44;CL:0000393,4.06e-10,39;CL:0000211,4.06e-10,39;CL:0000540,7.13e-10,33;CL:0000047,7.13e-10,33;CL:0000031,7.13e-10,33;CL:0000404,7.13e-10,33;CL:0002321,1.34e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.78e-23!75;UBERON:0001016!1.78e-23!75;UBERON:0001017!1.15e-22!73;UBERON:0005743!1.15e-22!73;UBERON:0004121!4.12e-19!102;UBERON:0000924!4.12e-19!102;UBERON:0006601!4.12e-19!102;UBERON:0001049!6.10e-19!52;UBERON:0005068!6.10e-19!52;UBERON:0006241!6.10e-19!52;UBERON:0007135!6.10e-19!52;UBERON:0000955!1.11e-18!50;UBERON:0006238!1.11e-18!50;UBERON:0002616!4.46e-18!49;UBERON:0000025!2.18e-17!114;UBERON:0002020!3.58e-17!34;UBERON:0004111!1.47e-16!122;UBERON:0002791!4.82e-15!29;UBERON:0003528!4.82e-15!29;UBERON:0001893!4.82e-15!29;UBERON:0002346!6.05e-15!71;UBERON:0003075!6.05e-15!71;UBERON:0007284!6.05e-15!71;UBERON:0000033!2.23e-14!63;UBERON:0003080!2.69e-13!40;UBERON:0002780!1.07e-12!39;UBERON:0001890!1.07e-12!39;UBERON:0006240!1.07e-12!39;UBERON:0000956!2.71e-11!21;UBERON:0001869!2.71e-11!21;UBERON:0000203!2.71e-11!21;UBERON:0003056!4.16e-11!49;UBERON:0002619!1.68e-09!17;UBERON:0000468!3.19e-09!333;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.31e-23,75;UBERON:0001017,8.55e-23,73;UBERON:0000073,1.76e-20,54;UBERON:0004121,6.48e-20,95;UBERON:0000924,6.48e-20,95;UBERON:0006601,6.48e-20,95;UBERON:0001049,4.78e-19,52;UBERON:0005068,4.78e-19,52;UBERON:0006241,4.78e-19,52;UBERON:0007135,4.78e-19,52;UBERON:0002020,2.88e-17,34;UBERON:0000025,4.84e-17,114;UBERON:0000955,9.10e-17,47;UBERON:0006238,9.10e-17,47;UBERON:0004111,2.74e-16,122;UBERON:0002616,3.54e-16,46;UBERON:0002346,6.19e-16,64;UBERON:0003075,6.19e-16,64;UBERON:0007284,6.19e-16,64;UBERON:0010314,2.93e-15,92;UBERON:0003528,3.99e-15,29;UBERON:0002791,3.99e-15,29;UBERON:0001893,3.99e-15,29;UBERON:0010371,8.31e-14,73;UBERON:0003080,2.28e-13,40;UBERON:0002780,9.17e-13,39;UBERON:0001890,9.17e-13,39;UBERON:0006240,9.17e-13,39;UBERON:0000956,2.36e-11,21;UBERON:0001869,2.36e-11,21;UBERON:0000203,2.36e-11,21;UBERON:0003056,3.64e-11,49;UBERON:0002619,1.50e-09,17;UBERON:0002021,1.83e-07,10;UBERON:0000411,1.83e-07,10;UBERON:0001950,1.83e-07,10 | |||
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| |||
|short_description=p2@Rusc2 | |||
}} |
Revision as of 11:35, 5 August 2015
Short description: | p2@Rusc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rusc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000131037, ENSMUST00000144911_5end |
EntrezGene: | 100213 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.65e-12 | 43 |
CNS neuron (sensu Vertebrata) | 1.40e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.40e-11 | 23 |
ectodermal cell | 2.98e-11 | 44 |
neurectodermal cell | 2.98e-11 | 44 |
electrically responsive cell | 4.06e-10 | 39 |
electrically active cell | 4.06e-10 | 39 |
neuron | 7.13e-10 | 33 |
neuronal stem cell | 7.13e-10 | 33 |
neuroblast | 7.13e-10 | 33 |
electrically signaling cell | 7.13e-10 | 33 |
embryonic cell | 1.34e-07 | 70 |