FFCP PHASE1:Mm9::chr12:92812009..92812012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=313 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000116715_5end | |||
|cluster_id=chr12:92812009..92812012,- | |||
|description=CAGE_peak_1_at_ENSMUST00000116715_5end | |||
|id=chr12:92812009..92812012,- | |||
|ontology_enrichment_celltype=CL:0000117!2.62e-17!23;CL:0000337!2.62e-17!23;CL:0000540!6.16e-17!33;CL:0000047!6.16e-17!33;CL:0000031!6.16e-17!33;CL:0000404!6.16e-17!33;CL:0002319!4.60e-15!43;CL:0000221!1.80e-14!44;CL:0000133!1.80e-14!44;CL:0000393!5.57e-14!39;CL:0000211!5.57e-14!39;CL:0000034!1.17e-12!97;CL:0000055!1.97e-12!50;CL:0000723!1.07e-11!91;CL:0000048!1.07e-11!91;CL:0000144!4.41e-10!121;CL:0000012!4.41e-10!121;CL:0002321!5.51e-10!70;CL:0000220!5.51e-10!70;CL:0002371!1.39e-09!118;CL:0000548!1.53e-09!115;CL:0000004!1.53e-09!115;CL:0000255!1.53e-09!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.07e-17,23;CL:0000337,3.07e-17,23;CL:0002614,2.98e-14,3;CL:0002610,1.45e-13,3;CL:0000540,1.52e-11,33;CL:0000047,1.52e-11,33;CL:0000031,1.52e-11,33;CL:0000404,1.52e-11,33;CL:0002319,2.69e-10,43;CL:0000221,5.06e-10,44;CL:0000133,5.06e-10,44;CL:0002321,1.13e-09,70;CL:0000393,1.58e-09,39;CL:0000211,1.58e-09,39;CL:0000723,2.08e-09,91;CL:0000048,2.08e-09,91;CL:0000034,1.18e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.03e-14!73;UBERON:0005743!1.03e-14!73;UBERON:0000073!1.31e-14!75;UBERON:0001016!1.31e-14!75;UBERON:0002020!1.44e-14!34;UBERON:0002791!8.96e-11!29;UBERON:0003528!8.96e-11!29;UBERON:0001893!8.96e-11!29;UBERON:0002021!3.76e-10!10;UBERON:0000411!3.76e-10!10;UBERON:0001950!3.76e-10!10;UBERON:0001049!3.19e-09!52;UBERON:0005068!3.19e-09!52;UBERON:0006241!3.19e-09!52;UBERON:0007135!3.19e-09!52;UBERON:0000956!9.53e-09!21;UBERON:0001869!9.53e-09!21;UBERON:0000203!9.53e-09!21;UBERON:0004121!9.61e-09!102;UBERON:0000924!9.61e-09!102;UBERON:0006601!9.61e-09!102;UBERON:0002616!1.21e-08!49;UBERON:0002780!2.06e-08!39;UBERON:0001890!2.06e-08!39;UBERON:0006240!2.06e-08!39;UBERON:0000955!2.70e-08!50;UBERON:0006238!2.70e-08!50;UBERON:0003080!5.12e-08!40;UBERON:0002346!3.99e-07!71;UBERON:0003075!3.99e-07!71;UBERON:0007284!3.99e-07!71;UBERON:0002619!4.47e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,2.98e-14,3;UBERON:0009663,2.98e-14,3;UBERON:0009661,2.98e-14,3;UBERON:0000125,2.98e-14,3;UBERON:0002308,2.98e-14,3;UBERON:0004684,1.45e-13,3;UBERON:0002275,1.45e-13,3;UBERON:0000073,2.62e-11,54;UBERON:0002020,4.00e-11,34;UBERON:0002950,8.20e-11,4;UBERON:0001891,8.20e-11,4;UBERON:0009616,8.20e-11,4;UBERON:0010286,8.20e-11,4;UBERON:0003528,8.34e-11,29;UBERON:0002791,8.34e-11,29;UBERON:0001893,8.34e-11,29;UBERON:0001017,9.73e-11,73;UBERON:0001016,2.20e-10,75;UBERON:0002780,1.08e-07,39;UBERON:0001890,1.08e-07,39;UBERON:0006240,1.08e-07,39;UBERON:0004121,1.20e-07,95;UBERON:0000924,1.20e-07,95;UBERON:0006601,1.20e-07,95;UBERON:0003080,1.81e-07,40;UBERON:0002021,4.13e-07,10;UBERON:0000411,4.13e-07,10;UBERON:0001950,4.13e-07,10;UBERON:0000956,8.58e-07,21;UBERON:0001869,8.58e-07,21;UBERON:0000203,8.58e-07,21;UBERON:0001049,9.89e-07,52;UBERON:0005068,9.89e-07,52;UBERON:0006241,9.89e-07,52;UBERON:0007135,9.89e-07,52 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0,0.342401459862411,0.174840804837995,0.666219523631325,0.202475267389826,0.699561878128147,0,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23012957516914,0,0,0.332469290716985,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0.218025156380447,0,0,0.419959264876088,0,0.167782606057736,0,0,0,0.286533439938757,0,0.202316460859598,2.64495489636016,0.633831403506179,0,0,0,0,1.4209602298922,0,1.15265491596466,0.622137673850866,1.08004750665353,1.47227472945967,0.571301968807607,0.662605622854841,0,0.479227355091182,0.919218786610021,1.10115880999389,3.57524546638526,2.61131106535614,0.527545150920775,0.365950574409639,0,8.37548997004143,5.06486349028512,1.98637722109853,0.589257170947335,1.28134512719193,0.559198337475902,0,0.0755715601067855,0,0,0,4.85732872474035,3.24888208723835,0,0,0,0,0,0,0,0,0,0.432982082022428,0,1.01104889002957,0,0.258937883647172,0,0,0.304465478312141,0,0.301445281105245,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,1.50791283939272,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0.209718688851422,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,2.05524755931193,0.755393897389701,0.675022500231806,2.2516060161211,2.26571204492102,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0,0.342401459862411,0.174840804837995,0.666219523631325,0.202475267389826,0.699561878128147,0,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23012957516914,0,0,0.332469290716985,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0.218025156380447,0,0,0.419959264876088,0,0.167782606057736,0,0,0,0.286533439938757,0,0.202316460859598,2.64495489636016,0.633831403506179,0,0,0,0,1.4209602298922,0,1.15265491596466,0.622137673850866,1.08004750665353,1.47227472945967,0.571301968807607,0.662605622854841,0,0.479227355091182,0.919218786610021,1.10115880999389,3.57524546638526,2.61131106535614,0.527545150920775,0.365950574409639,0,8.37548997004143,5.06486349028512,1.98637722109853,0.589257170947335,1.28134512719193,0.559198337475902,0,0.0755715601067855,0,0,0,4.85732872474035,3.24888208723835,0,0,0,0,0,0,0,0,0,0.432982082022428,0,1.01104889002957,0,0.258937883647172,0,0,0.304465478312141,0,0.301445281105245,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,1.50791283939272,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0.209718688851422,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,2.05524755931193,0.755393897389701,0.675022500231806,2.2516060161211,2.26571204492102,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p1@ENSMUST00000116715 | |||
}} | }} |
Latest revision as of 11:34, 5 August 2015
Short description: | p1@ENSMUST00000116715 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000116715_5end |
Coexpression cluster: | MCL_coexpression_mm9:313 |
Association with transcript: | 0bp_to_ENSMUST00000116715_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.07e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.07e-17 | 23 |
neuron of the substantia nigra | 2.98e-14 | 3 |
raphe nuclei neuron | 1.45e-13 | 3 |
neuron | 1.52e-11 | 33 |
neuronal stem cell | 1.52e-11 | 33 |
neuroblast | 1.52e-11 | 33 |
electrically signaling cell | 1.52e-11 | 33 |
neural cell | 2.69e-10 | 43 |
ectodermal cell | 5.06e-10 | 44 |
neurectodermal cell | 5.06e-10 | 44 |
embryonic cell | 1.13e-09 | 70 |
electrically responsive cell | 1.58e-09 | 39 |
electrically active cell | 1.58e-09 | 39 |
somatic stem cell | 2.08e-09 | 91 |
multi fate stem cell | 2.08e-09 | 91 |
stem cell | 1.18e-08 | 97 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 2.98e-14 | 3 |
telencephalic nucleus | 2.98e-14 | 3 |
midbrain nucleus | 2.98e-14 | 3 |
neural nucleus | 2.98e-14 | 3 |
nucleus of brain | 2.98e-14 | 3 |
raphe nuclei | 1.45e-13 | 3 |
reticular formation | 1.45e-13 | 3 |
regional part of nervous system | 2.62e-11 | 54 |
gray matter | 4.00e-11 | 34 |
regional part of midbrain | 8.20e-11 | 4 |
midbrain | 8.20e-11 | 4 |
presumptive midbrain | 8.20e-11 | 4 |
midbrain neural tube | 8.20e-11 | 4 |
brain grey matter | 8.34e-11 | 29 |
regional part of telencephalon | 8.34e-11 | 29 |
telencephalon | 8.34e-11 | 29 |
central nervous system | 9.73e-11 | 73 |
nervous system | 2.20e-10 | 75 |
regional part of forebrain | 1.08e-07 | 39 |
forebrain | 1.08e-07 | 39 |
future forebrain | 1.08e-07 | 39 |
ectoderm-derived structure | 1.20e-07 | 95 |
ectoderm | 1.20e-07 | 95 |
presumptive ectoderm | 1.20e-07 | 95 |
anterior neural tube | 1.81e-07 | 40 |
occipital lobe | 4.13e-07 | 10 |
visual cortex | 4.13e-07 | 10 |
neocortex | 4.13e-07 | 10 |
cerebral cortex | 8.58e-07 | 21 |
cerebral hemisphere | 8.58e-07 | 21 |
pallium | 8.58e-07 | 21 |
neural tube | 9.89e-07 | 52 |
neural rod | 9.89e-07 | 52 |
future spinal cord | 9.89e-07 | 52 |
neural keel | 9.89e-07 | 52 |