FFCP PHASE1:Mm9::chr1:189475390..189475413,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=121|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:189475390..189475413,+|id=chr1:189475390..189475413,+|ontology_enrichment_celltype=CL:0000117!1.03e-16!23;CL:0000337!1.03e-16!23;CL:0000540!9.70e-10!33;CL:0000047!9.70e-10!33;CL:0000031!9.70e-10!33;CL:0000404!9.70e-10!33;CL:0000393!1.01e-07!39;CL:0000211!1.01e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.09e-17,23;CL:0000337,1.09e-17,23;CL:0000540,3.03e-11,33;CL:0000047,3.03e-11,33;CL:0000031,3.03e-11,33;CL:0000404,3.03e-11,33;CL:0000393,5.53e-09,39;CL:0000211,5.53e-09,39;CL:0002610,6.16e-08,3;CL:0002319,7.80e-08,43;CL:0000221,1.40e-07,44;CL:0000133,1.40e-07,44;CL:0002613,8.88e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.78e-22!63;UBERON:0002346!8.24e-19!71;UBERON:0003075!8.24e-19!71;UBERON:0007284!8.24e-19!71;UBERON:0001049!1.37e-18!52;UBERON:0005068!1.37e-18!52;UBERON:0006241!1.37e-18!52;UBERON:0007135!1.37e-18!52;UBERON:0002020!4.28e-18!34;UBERON:0000955!2.51e-17!50;UBERON:0006238!2.51e-17!50;UBERON:0001017!1.10e-16!73;UBERON:0005743!1.10e-16!73;UBERON:0004121!1.32e-16!102;UBERON:0000924!1.32e-16!102;UBERON:0006601!1.32e-16!102;UBERON:0002616!1.56e-16!49;UBERON:0000073!9.18e-16!75;UBERON:0001016!9.18e-16!75;UBERON:0003056!5.28e-15!49;UBERON:0002791!3.20e-14!29;UBERON:0003528!3.20e-14!29;UBERON:0001893!3.20e-14!29;UBERON:0007811!9.43e-13!86;UBERON:0003080!5.70e-12!40;UBERON:0002780!2.70e-11!39;UBERON:0001890!2.70e-11!39;UBERON:0006240!2.70e-11!39;UBERON:0004111!1.37e-10!122;UBERON:0000153!3.11e-10!94;UBERON:0000025!3.34e-10!114;UBERON:0000956!1.62e-08!21;UBERON:0001869!1.62e-08!21;UBERON:0000203!1.62e-08!21;UBERON:0003076!8.02e-08!12;UBERON:0003057!8.02e-08!12;UBERON:0002420!1.92e-07!8;UBERON:0007245!1.92e-07!8;UBERON:0010009!1.92e-07!8;UBERON:0010011!1.92e-07!8;UBERON:0000454!1.92e-07!8;UBERON:0002619!4.46e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.72e-35,54;UBERON:0001017,1.66e-31,73;UBERON:0001049,2.97e-31,52;UBERON:0005068,2.97e-31,52;UBERON:0006241,2.97e-31,52;UBERON:0007135,2.97e-31,52;UBERON:0001016,1.90e-30,75;UBERON:0002346,9.85e-28,64;UBERON:0003075,9.85e-28,64;UBERON:0007284,9.85e-28,64;UBERON:0004121,2.95e-27,95;UBERON:0000924,2.95e-27,95;UBERON:0006601,2.95e-27,95;UBERON:0000955,3.38e-25,47;UBERON:0006238,3.38e-25,47;UBERON:0002020,9.34e-25,34;UBERON:0002616,1.35e-23,46;UBERON:0010371,2.22e-23,73;UBERON:0010314,9.57e-23,92;UBERON:0003528,6.16e-19,29;UBERON:0002791,6.16e-19,29;UBERON:0001893,6.16e-19,29;UBERON:0003080,4.11e-18,40;UBERON:0003056,5.67e-17,49;UBERON:0002780,9.56e-17,39;UBERON:0001890,9.56e-17,39;UBERON:0006240,9.56e-17,39;UBERON:0003076,8.91e-15,12;UBERON:0003057,8.91e-15,12;UBERON:0000025,1.74e-14,114;UBERON:0004111,3.09e-14,122;UBERON:0002021,3.09e-12,10;UBERON:0000411,3.09e-12,10;UBERON:0001950,3.09e-12,10;UBERON:0002420,3.49e-12,8;UBERON:0007245,3.49e-12,8;UBERON:0010009,3.49e-12,8;UBERON:0010011,3.49e-12,8;UBERON:0000454,3.49e-12,8;UBERON:0000369,2.40e-10,5;UBERON:0002435,2.40e-10,5;UBERON:0000204,2.40e-10,5;UBERON:0010082,2.40e-10,5;UBERON:0002619,3.75e-10,17;UBERON:0000956,1.49e-09,21;UBERON:0001869,1.49e-09,21;UBERON:0000203,1.49e-09,21;UBERON:0002240,1.95e-09,6;UBERON:0005174,1.95e-09,6;UBERON:0001137,1.95e-09,6;UBERON:0000483,3.48e-08,174;UBERON:0000119,5.33e-08,176;UBERON:0004684,6.16e-08,3;UBERON:0002275,6.16e-08,3;UBERON:0011216,1.60e-07,194;UBERON:0001948,2.36e-07,5;UBERON:0002315,2.36e-07,5;UBERON:0004733,5.77e-07,6;UBERON:0004732,5.77e-07,6;UBERON:0002028,5.77e-07,6;UBERON:0007277,5.77e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.210324961351382,3.42781181284564,2.42955395046775,1.10241719293459,0.862609239164127,0.919218786610021,5.50579404996943,3.70293280447044,3.84016333140609,3.03338461779446,2.37867873366265,1.04182674111352,3.07101298901519,0.56276261003168,2.13917546887534,0.589257170947335,2.70506193518296,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.484875253135222,0,8.49064311333487,10.0534419270458,0,0,0,0,2.09706895166752,3.66000482254901,1.25654352112864,1.56441888173049,0.767146371990992,4.36354893575076,2.59586020908412,0.101839363850316,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0,0.30140963567143,0.408218994907967,1.0249097622788,0.937017245597288,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.710234206755631,0.787056926989615,0.154267112887378,0.232533944750408,0,0.467061369468678,0.987359099480883,1.97000956894914,1.05389452409612,2.48539978623065,0.8782004611642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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=121 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:189475390..189475413,+ | |||
|description=CAGE_peak_at_chr1:189475390..189475413,+ | |||
|id=chr1:189475390..189475413,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.03e-16!23;CL:0000337!1.03e-16!23;CL:0000540!9.70e-10!33;CL:0000047!9.70e-10!33;CL:0000031!9.70e-10!33;CL:0000404!9.70e-10!33;CL:0000393!1.01e-07!39;CL:0000211!1.01e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.09e-17,23;CL:0000337,1.09e-17,23;CL:0000540,3.03e-11,33;CL:0000047,3.03e-11,33;CL:0000031,3.03e-11,33;CL:0000404,3.03e-11,33;CL:0000393,5.53e-09,39;CL:0000211,5.53e-09,39;CL:0002610,6.16e-08,3;CL:0002319,7.80e-08,43;CL:0000221,1.40e-07,44;CL:0000133,1.40e-07,44;CL:0002613,8.88e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.78e-22!63;UBERON:0002346!8.24e-19!71;UBERON:0003075!8.24e-19!71;UBERON:0007284!8.24e-19!71;UBERON:0001049!1.37e-18!52;UBERON:0005068!1.37e-18!52;UBERON:0006241!1.37e-18!52;UBERON:0007135!1.37e-18!52;UBERON:0002020!4.28e-18!34;UBERON:0000955!2.51e-17!50;UBERON:0006238!2.51e-17!50;UBERON:0001017!1.10e-16!73;UBERON:0005743!1.10e-16!73;UBERON:0004121!1.32e-16!102;UBERON:0000924!1.32e-16!102;UBERON:0006601!1.32e-16!102;UBERON:0002616!1.56e-16!49;UBERON:0000073!9.18e-16!75;UBERON:0001016!9.18e-16!75;UBERON:0003056!5.28e-15!49;UBERON:0002791!3.20e-14!29;UBERON:0003528!3.20e-14!29;UBERON:0001893!3.20e-14!29;UBERON:0007811!9.43e-13!86;UBERON:0003080!5.70e-12!40;UBERON:0002780!2.70e-11!39;UBERON:0001890!2.70e-11!39;UBERON:0006240!2.70e-11!39;UBERON:0004111!1.37e-10!122;UBERON:0000153!3.11e-10!94;UBERON:0000025!3.34e-10!114;UBERON:0000956!1.62e-08!21;UBERON:0001869!1.62e-08!21;UBERON:0000203!1.62e-08!21;UBERON:0003076!8.02e-08!12;UBERON:0003057!8.02e-08!12;UBERON:0002420!1.92e-07!8;UBERON:0007245!1.92e-07!8;UBERON:0010009!1.92e-07!8;UBERON:0010011!1.92e-07!8;UBERON:0000454!1.92e-07!8;UBERON:0002619!4.46e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.72e-35,54;UBERON:0001017,1.66e-31,73;UBERON:0001049,2.97e-31,52;UBERON:0005068,2.97e-31,52;UBERON:0006241,2.97e-31,52;UBERON:0007135,2.97e-31,52;UBERON:0001016,1.90e-30,75;UBERON:0002346,9.85e-28,64;UBERON:0003075,9.85e-28,64;UBERON:0007284,9.85e-28,64;UBERON:0004121,2.95e-27,95;UBERON:0000924,2.95e-27,95;UBERON:0006601,2.95e-27,95;UBERON:0000955,3.38e-25,47;UBERON:0006238,3.38e-25,47;UBERON:0002020,9.34e-25,34;UBERON:0002616,1.35e-23,46;UBERON:0010371,2.22e-23,73;UBERON:0010314,9.57e-23,92;UBERON:0003528,6.16e-19,29;UBERON:0002791,6.16e-19,29;UBERON:0001893,6.16e-19,29;UBERON:0003080,4.11e-18,40;UBERON:0003056,5.67e-17,49;UBERON:0002780,9.56e-17,39;UBERON:0001890,9.56e-17,39;UBERON:0006240,9.56e-17,39;UBERON:0003076,8.91e-15,12;UBERON:0003057,8.91e-15,12;UBERON:0000025,1.74e-14,114;UBERON:0004111,3.09e-14,122;UBERON:0002021,3.09e-12,10;UBERON:0000411,3.09e-12,10;UBERON:0001950,3.09e-12,10;UBERON:0002420,3.49e-12,8;UBERON:0007245,3.49e-12,8;UBERON:0010009,3.49e-12,8;UBERON:0010011,3.49e-12,8;UBERON:0000454,3.49e-12,8;UBERON:0000369,2.40e-10,5;UBERON:0002435,2.40e-10,5;UBERON:0000204,2.40e-10,5;UBERON:0010082,2.40e-10,5;UBERON:0002619,3.75e-10,17;UBERON:0000956,1.49e-09,21;UBERON:0001869,1.49e-09,21;UBERON:0000203,1.49e-09,21;UBERON:0002240,1.95e-09,6;UBERON:0005174,1.95e-09,6;UBERON:0001137,1.95e-09,6;UBERON:0000483,3.48e-08,174;UBERON:0000119,5.33e-08,176;UBERON:0004684,6.16e-08,3;UBERON:0002275,6.16e-08,3;UBERON:0011216,1.60e-07,194;UBERON:0001948,2.36e-07,5;UBERON:0002315,2.36e-07,5;UBERON:0004733,5.77e-07,6;UBERON:0004732,5.77e-07,6;UBERON:0002028,5.77e-07,6;UBERON:0007277,5.77e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.210324961351382,3.42781181284564,2.42955395046775,1.10241719293459,0.862609239164127,0.919218786610021,5.50579404996943,3.70293280447044,3.84016333140609,3.03338461779446,2.37867873366265,1.04182674111352,3.07101298901519,0.56276261003168,2.13917546887534,0.589257170947335,2.70506193518296,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.484875253135222,0,8.49064311333487,10.0534419270458,0,0,0,0,2.09706895166752,3.66000482254901,1.25654352112864,1.56441888173049,0.767146371990992,4.36354893575076,2.59586020908412,0.101839363850316,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0,0.30140963567143,0.408218994907967,1.0249097622788,0.937017245597288,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.710234206755631,0.787056926989615,0.154267112887378,0.232533944750408,0,0.467061369468678,0.987359099480883,1.97000956894914,1.05389452409612,2.48539978623065,0.878200461164203,1.47627060636409,1.05144974282064,0.823236899034275,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,6.74312477948726,4.68846746368813,0,0.252470927204373,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0,0.26175594198403,0,4.97071450469541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.25900737046827,1.38097570952153,3.43737308063638,1.54667864109319,0,0,1.35004500046361,1.80128481289688,4.53142408984205,2.07104124700728,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0,0,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,0.561849044819294,0.384150914429216,0.229741875822453,0,0.231768651889711,0.578727661391115,0,0.294397840268795,0,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.423073039458382,0,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0.309873682371932,0.385813221962283,0,0.701794825336225,0,0.382576664137687,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr1:189475390..189475413,+ | |||
}} |
Latest revision as of 11:24, 5 August 2015
Short description: | p@chr1:189475390..189475413, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:189475390..189475413, + |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.09e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.09e-17 | 23 |
neuron | 3.03e-11 | 33 |
neuronal stem cell | 3.03e-11 | 33 |
neuroblast | 3.03e-11 | 33 |
electrically signaling cell | 3.03e-11 | 33 |
electrically responsive cell | 5.53e-09 | 39 |
electrically active cell | 5.53e-09 | 39 |
raphe nuclei neuron | 6.16e-08 | 3 |
neural cell | 7.80e-08 | 43 |
ectodermal cell | 1.40e-07 | 44 |
neurectodermal cell | 1.40e-07 | 44 |
striatum neuron | 8.88e-07 | 3 |