FFCP PHASE1:Mm9::chr12:90284364..90284369,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr12:90284364..90284369,+ to FFCP PHASE1:Mm9::chr12:90284364..90284369,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=538 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:90284364..90284369,+ | |||
|description=CAGE_peak_at_chr12:90284364..90284369,+ | |||
|id=chr12:90284364..90284369,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.26e-12!63;UBERON:0003056!1.37e-10!49;UBERON:0002346!4.81e-10!71;UBERON:0003075!4.81e-10!71;UBERON:0007284!4.81e-10!71;UBERON:0000955!1.29e-09!50;UBERON:0006238!1.29e-09!50;UBERON:0002021!3.61e-09!10;UBERON:0000411!3.61e-09!10;UBERON:0001950!3.61e-09!10;UBERON:0001049!4.88e-09!52;UBERON:0005068!4.88e-09!52;UBERON:0006241!4.88e-09!52;UBERON:0007135!4.88e-09!52;UBERON:0002616!5.33e-09!49;UBERON:0001017!1.40e-07!73;UBERON:0005743!1.40e-07!73;UBERON:0000073!2.95e-07!75;UBERON:0001016!2.95e-07!75;UBERON:0003080!3.62e-07!40;UBERON:0004121!4.96e-07!102;UBERON:0000924!4.96e-07!102;UBERON:0006601!4.96e-07!102;UBERON:0002619!5.41e-07!17;UBERON:0002780!9.75e-07!39;UBERON:0001890!9.75e-07!39;UBERON:0006240!9.75e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.75e-16,10;UBERON:0000411,3.75e-16,10;UBERON:0001950,3.75e-16,10;UBERON:0002346,2.38e-14,64;UBERON:0003075,2.38e-14,64;UBERON:0007284,2.38e-14,64;UBERON:0003056,8.29e-13,49;UBERON:0010371,1.93e-12,73;UBERON:0000955,5.46e-12,47;UBERON:0006238,5.46e-12,47;UBERON:0002616,5.76e-11,46;UBERON:0004121,1.49e-10,95;UBERON:0000924,1.49e-10,95;UBERON:0006601,1.49e-10,95;UBERON:0002619,3.70e-10,17;UBERON:0000073,4.07e-10,54;UBERON:0001049,7.13e-10,52;UBERON:0005068,7.13e-10,52;UBERON:0006241,7.13e-10,52;UBERON:0007135,7.13e-10,52;UBERON:0001017,1.07e-09,73;UBERON:0000956,3.10e-09,21;UBERON:0001869,3.10e-09,21;UBERON:0000203,3.10e-09,21;UBERON:0001016,3.14e-09,75;UBERON:0003528,3.32e-09,29;UBERON:0002791,3.32e-09,29;UBERON:0001893,3.32e-09,29;UBERON:0003080,1.73e-08,40;UBERON:0010314,4.35e-08,92;UBERON:0002780,8.61e-08,39;UBERON:0001890,8.61e-08,39;UBERON:0006240,8.61e-08,39;UBERON:0002020,3.06e-07,34 | |||
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|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0.0958454710182364,0.919218786610021,1.10115880999389,1.0214987046815,0,0,0.0914876436024097,0,0.279182999001381,1.12552522006336,0.45839474333043,0.294628585473668,0.142371680799103,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0,0,0,2.63502717310392,3.14170060220183,0,0,0,0,1.49790639404823,3.66000482254901,2.01046963380583,4.69325664519146,5.62574006126727,1.66230435647648,4.05603157669394,0.81471491080253,0.248813941220186,0,2.31486041475121,0.130120442962704,0.229902104433473,0.180062129805349,2.56198190320716,3.53789795586905,6.66191345481219,6.65282244374075,9.57202471734358,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.900310307305074,0,0.787056926989615,0,0.232533944750408,0.536546802799238,0.350296027101508,0,0,0,0.146199987425332,0.219550115291051,0,3.99550902271842,0.823236899034275,0,0,0.639864751605702,0,0.38660238396628,0.403367049246685,0,0,0.474529061544512,0.164698954724011,0,0,0,0.898819408654221,0,0,0,0.456994050438915,0,0.407302655690628,1.16371492300575,0.631222379012867,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0.50925170356284,0,0,0,1.43768206527355,0.744281895337007,0,1.01031551178845,0.717589654087649,0,0,0.189491411770485,0,0.169745085775188,0.938760993154008,0.502518772325447,0.476087281772027,0.195133647857799,1.10344600874334,1.10732344824387,0.478364305972461,0,0,0.144649058581512,0,0,0,0,1.28440471990234,3.04750385139728,0,0,0,0,2.15423397732799,0,0.222798674082394,0,0,1.16902343164525,0.790575555893047,15.4234231882467,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0,0.214337035031592,0.177340233642274,0.891844088010353,0.658196082408484,0,0,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0,0,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.203319467126849,0.648032044930808,0.209088296014469,0.436725127492355,0,0.247960367176008,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0.387479470433193,0.506868376472335,0.234714477291508,0.5208175393758,0.629156066554265,0.724752362478018,0.864090018773596,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0,0,0,9.03602948187307,5.9842280745933,7.44764167471216,11.3423100346834,5.48066015816514,4.5323633843382,5.40018000185445,4.95353323546643,9.9691329976525,7.7664046762773,0.103787347584177,0,2.04880326904961,2.43106717068294,0.209613162627982,0,3.33370091702423,0.618105171716683,0.962757628775446,1.01078884705519,2.02783439912192,1.32038438970253,0.936415074698824,1.02440243847791,0.631790158511746,0.952587382566147,1.39061191133827,0.38581844092741,1.64834360321323,1.17759136107518,1.37147700954166,1.24233064311536,1.1921809497366,1.30811774969096,1.12931256498397,1.69229215783353,1.09756783723664,1.57841826862706,0.950628796921032,4.48913817326191,1.77952527186261,1.37906275325789,2.04615521584845,1.23949472948773,0.771626443924566,1.49886346762768,1.40358965067245,0.429742108096597,0.191288332068843,0,0 | ||
|short_description=p@chr12:90284364..90284369,+ | |||
}} | }} |
Latest revision as of 11:18, 5 August 2015
Short description: | p@chr12:90284364..90284369, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:90284364..90284369, + |
Coexpression cluster: | MCL_coexpression_mm9:538 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.75e-16 | 10 |
visual cortex | 3.75e-16 | 10 |
neocortex | 3.75e-16 | 10 |
neurectoderm | 2.38e-14 | 64 |
neural plate | 2.38e-14 | 64 |
presumptive neural plate | 2.38e-14 | 64 |
pre-chordal neural plate | 8.29e-13 | 49 |
ecto-epithelium | 1.93e-12 | 73 |
brain | 5.46e-12 | 47 |
future brain | 5.46e-12 | 47 |
regional part of brain | 5.76e-11 | 46 |
ectoderm-derived structure | 1.49e-10 | 95 |
ectoderm | 1.49e-10 | 95 |
presumptive ectoderm | 1.49e-10 | 95 |
regional part of cerebral cortex | 3.70e-10 | 17 |
regional part of nervous system | 4.07e-10 | 54 |
neural tube | 7.13e-10 | 52 |
neural rod | 7.13e-10 | 52 |
future spinal cord | 7.13e-10 | 52 |
neural keel | 7.13e-10 | 52 |
central nervous system | 1.07e-09 | 73 |
cerebral cortex | 3.10e-09 | 21 |
cerebral hemisphere | 3.10e-09 | 21 |
pallium | 3.10e-09 | 21 |
nervous system | 3.14e-09 | 75 |
brain grey matter | 3.32e-09 | 29 |
regional part of telencephalon | 3.32e-09 | 29 |
telencephalon | 3.32e-09 | 29 |
anterior neural tube | 1.73e-08 | 40 |
structure with developmental contribution from neural crest | 4.35e-08 | 92 |
regional part of forebrain | 8.61e-08 | 39 |
forebrain | 8.61e-08 | 39 |
future forebrain | 8.61e-08 | 39 |
gray matter | 3.06e-07 | 34 |