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FFCP PHASE1:Mm9::chr6:149357401..149357412,+: Difference between revisions

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{{FFCP|EntrezGene=12121|HGNC=|MCL_coexpression_id=826|UniProt=B2KG45,Q5DTM3,B2KG44,Q8BR07|association_with_transcript=0bp_to_NM_001112796,NM_009753,uc009euf.1,uc009eug.2,uc009euh.2,uc009eui.2_5end|description=CAGE_peak_3_at_Bicd1_5end|id=chr6:149357401..149357412,+|ontology_enrichment_celltype=CL:0000540!8.01e-10!33;CL:0000047!8.01e-10!33;CL:0000031!8.01e-10!33;CL:0000404!8.01e-10!33;CL:0000393!3.07e-08!39;CL:0000211!3.07e-08!39;CL:0000221!7.82e-08!44;CL:0000133!7.82e-08!44;CL:0002319!2.62e-07!43|ontology_enrichment_celltype_v019_2=CL:0000540,3.69e-15,33;CL:0000047,3.69e-15,33;CL:0000031,3.69e-15,33;CL:0000404,3.69e-15,33;CL:0000393,1.42e-13,39;CL:0000211,1.42e-13,39;CL:0000221,5.92e-13,44;CL:0000133,5.92e-13,44;CL:0000107,9.85e-13,9;CL:0002319,9.13e-12,43;CL:0002321,4.91e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.19e-19!75;UBERON:0001016!3.19e-19!75;UBERON:0001017!2.35e-18!73;UBERON:0005743!2.35e-18!73;UBERON:0004121!1.03e-17!102;UBERON:0000924!1.03e-17!102;UBERON:0006601!1.03e-17!102;UBERON:0002346!2.04e-15!71;UBERON:0003075!2.04e-15!71;UBERON:0007284!2.04e-15!71;UBERON:0000033!5.37e-15!63;UBERON:0001049!2.56e-12!52;UBERON:0005068!2.56e-12!52;UBERON:0006241!2.56e-12!52;UBERON:0007135!2.56e-12!52;UBERON:0000955!1.09e-11!50;UBERON:0006238!1.09e-11!50;UBERON:0003056!2.19e-11!49;UBERON:0002616!3.55e-11!49;UBERON:0002020!9.04e-09!34;UBERON:0003080!1.33e-08!40;UBERON:0002780!4.64e-08!39;UBERON:0001890!4.64e-08!39;UBERON:0006240!4.64e-08!39;UBERON:0000010!4.20e-07!11;UBERON:0007811!5.30e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.51e-30,75;UBERON:0001017,6.91e-30,73;UBERON:0004121,2.42e-28,95;UBERON:0000924,2.42e-28,95;UBERON:0006601,2.42e-28,95;UBERON:0002346,1.89e-18,64;UBERON:0003075,1.89e-18,64;UBERON:0007284,1.89e-18,64;UBERON:0000073,3.96e-18,54;UBERON:0010371,6.16e-18,73;UBERON:0001049,1.16e-15,52;UBERON:0005068,1.16e-15,52;UBERON:0006241,1.16e-15,52;UBERON:0007135,1.16e-15,52;UBERON:0010314,1.33e-13,92;UBERON:0002410,9.85e-13,9;UBERON:0000010,1.53e-12,11;UBERON:0000955,3.99e-12,47;UBERON:0006238,3.99e-12,47;UBERON:0002616,3.74e-11,46;UBERON:0003076,7.53e-11,12;UBERON:0003057,7.53e-11,12;UBERON:0002020,7.54e-11,34;UBERON:0003056,1.22e-08,49;UBERON:0003080,8.48e-08,40;UBERON:0003528,1.79e-07,29;UBERON:0002791,1.79e-07,29;UBERON:0001893,1.79e-07,29;UBERON:0002780,7.11e-07,39;UBERON:0001890,7.11e-07,39;UBERON:0006240,7.11e-07,39;UBERON:0002240,7.31e-07,6;UBERON:0005174,7.31e-07,6;UBERON:0001137,7.31e-07,6|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.765389611359628,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0.777719596297134,0,0,0.335565212115473,0,0.336093799142464,0,0,1.54701627683233,0.606949382578793,2.11596391708813,0,0,0,0,0,0,0,0.384218305321555,0.725827286159344,0.135005938331691,0.210324961351382,1.14260393761521,0.662605622854841,0.244981598429908,0.191690942036473,0,2.20231761998777,2.29837208553338,1.53606533256243,0.659431438650969,0.640413505216868,1.04182674111352,0.558365998002762,0,1.22238598221448,2.06240009831567,1.99320353118744,1.1183966749518,0.605809546665472,1.28471652181535,0.289864488701678,0,0,0,0,0,0,0,0.519572009205738,0,2.95771181531029,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,0,0,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0.247194967734374,0.722996784599558,0,0.161766849947409,0,0,0,3.51336956413857,3.97948742945565,0.255457055208591,0,0,0,2.39665023047716,3.66000482254901,2.01046963380583,1.21677024134594,1.02286182932132,2.70124457927428,1.62241263067758,0.916554274652847,0.248813941220186,0,0.210441855886474,0.520481771850815,0.689706313300419,0.540186389416048,0.60281927134286,1.56483948048054,0.768682321709099,1.40552586839593,2.06962696591213,0.215567992932842,0,0.351902248327898,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.462801338662135,0,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.486412857275134,0.584799949701329,0,0.134206418760372,1.26173969138476,2.77842453424068,0,0.528901133327089,0.426576501070468,0.696710015581316,0.38660238396628,0.201683524623343,0.444756087689741,0.570676878337677,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0.456994050438915,0,0.203651327845314,0,0.210407459670956,0.569128834118316,0.442830443938806,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0.678980343100753,0.704070744865506,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0,1.50791283939272,0,0,0,1.76605648986571,1.87538698547525,0,0,3.47059041357882,0.390438744296638,2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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12121
|HGNC=
|MCL_coexpression_id=826
|TSSclassifier=NA
|UniProt=uniprot:B2KG45,uniprot:Q5DTM3,uniprot:B2KG44,uniprot:Q8BR07
|association_with_transcript=0bp_to_NM_001112796,NM_009753,uc009euf.1,uc009eug.2,uc009euh.2,uc009eui.2_5end
|cluster_id=chr6:149357401..149357412,+
|description=CAGE_peak_3_at_Bicd1_5end
|id=chr6:149357401..149357412,+
|ontology_enrichment_celltype=CL:0000540!8.01e-10!33;CL:0000047!8.01e-10!33;CL:0000031!8.01e-10!33;CL:0000404!8.01e-10!33;CL:0000393!3.07e-08!39;CL:0000211!3.07e-08!39;CL:0000221!7.82e-08!44;CL:0000133!7.82e-08!44;CL:0002319!2.62e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000540,3.69e-15,33;CL:0000047,3.69e-15,33;CL:0000031,3.69e-15,33;CL:0000404,3.69e-15,33;CL:0000393,1.42e-13,39;CL:0000211,1.42e-13,39;CL:0000221,5.92e-13,44;CL:0000133,5.92e-13,44;CL:0000107,9.85e-13,9;CL:0002319,9.13e-12,43;CL:0002321,4.91e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.19e-19!75;UBERON:0001016!3.19e-19!75;UBERON:0001017!2.35e-18!73;UBERON:0005743!2.35e-18!73;UBERON:0004121!1.03e-17!102;UBERON:0000924!1.03e-17!102;UBERON:0006601!1.03e-17!102;UBERON:0002346!2.04e-15!71;UBERON:0003075!2.04e-15!71;UBERON:0007284!2.04e-15!71;UBERON:0000033!5.37e-15!63;UBERON:0001049!2.56e-12!52;UBERON:0005068!2.56e-12!52;UBERON:0006241!2.56e-12!52;UBERON:0007135!2.56e-12!52;UBERON:0000955!1.09e-11!50;UBERON:0006238!1.09e-11!50;UBERON:0003056!2.19e-11!49;UBERON:0002616!3.55e-11!49;UBERON:0002020!9.04e-09!34;UBERON:0003080!1.33e-08!40;UBERON:0002780!4.64e-08!39;UBERON:0001890!4.64e-08!39;UBERON:0006240!4.64e-08!39;UBERON:0000010!4.20e-07!11;UBERON:0007811!5.30e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.51e-30,75;UBERON:0001017,6.91e-30,73;UBERON:0004121,2.42e-28,95;UBERON:0000924,2.42e-28,95;UBERON:0006601,2.42e-28,95;UBERON:0002346,1.89e-18,64;UBERON:0003075,1.89e-18,64;UBERON:0007284,1.89e-18,64;UBERON:0000073,3.96e-18,54;UBERON:0010371,6.16e-18,73;UBERON:0001049,1.16e-15,52;UBERON:0005068,1.16e-15,52;UBERON:0006241,1.16e-15,52;UBERON:0007135,1.16e-15,52;UBERON:0010314,1.33e-13,92;UBERON:0002410,9.85e-13,9;UBERON:0000010,1.53e-12,11;UBERON:0000955,3.99e-12,47;UBERON:0006238,3.99e-12,47;UBERON:0002616,3.74e-11,46;UBERON:0003076,7.53e-11,12;UBERON:0003057,7.53e-11,12;UBERON:0002020,7.54e-11,34;UBERON:0003056,1.22e-08,49;UBERON:0003080,8.48e-08,40;UBERON:0003528,1.79e-07,29;UBERON:0002791,1.79e-07,29;UBERON:0001893,1.79e-07,29;UBERON:0002780,7.11e-07,39;UBERON:0001890,7.11e-07,39;UBERON:0006240,7.11e-07,39;UBERON:0002240,7.31e-07,6;UBERON:0005174,7.31e-07,6;UBERON:0001137,7.31e-07,6
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.765389611359628,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0.777719596297134,0,0,0.335565212115473,0,0.336093799142464,0,0,1.54701627683233,0.606949382578793,2.11596391708813,0,0,0,0,0,0,0,0.384218305321555,0.725827286159344,0.135005938331691,0.210324961351382,1.14260393761521,0.662605622854841,0.244981598429908,0.191690942036473,0,2.20231761998777,2.29837208553338,1.53606533256243,0.659431438650969,0.640413505216868,1.04182674111352,0.558365998002762,0,1.22238598221448,2.06240009831567,1.99320353118744,1.1183966749518,0.605809546665472,1.28471652181535,0.289864488701678,0,0,0,0,0,0,0,0.519572009205738,0,2.95771181531029,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,0,0,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0.247194967734374,0.722996784599558,0,0.161766849947409,0,0,0,3.51336956413857,3.97948742945565,0.255457055208591,0,0,0,2.39665023047716,3.66000482254901,2.01046963380583,1.21677024134594,1.02286182932132,2.70124457927428,1.62241263067758,0.916554274652847,0.248813941220186,0,0.210441855886474,0.520481771850815,0.689706313300419,0.540186389416048,0.60281927134286,1.56483948048054,0.768682321709099,1.40552586839593,2.06962696591213,0.215567992932842,0,0.351902248327898,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0.462801338662135,0,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.486412857275134,0.584799949701329,0,0.134206418760372,1.26173969138476,2.77842453424068,0,0.528901133327089,0.426576501070468,0.696710015581316,0.38660238396628,0.201683524623343,0.444756087689741,0.570676878337677,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0.456994050438915,0,0.203651327845314,0,0.210407459670956,0.569128834118316,0.442830443938806,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0.678980343100753,0.704070744865506,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0,0,0.172684981865896,0,1.50791283939272,0,0,0,1.76605648986571,1.87538698547525,0,0,3.47059041357882,0.390438744296638,2.15423397732799,1.19484398976276,1.78238939265915,2.54768877709949,1.61924280669958,2.92255857911312,2.37172666767914,1.60660658210904,1.41940085208269,0.35613120733451,1.62886959353576,0.659880491890142,0,0.485561272309963,0,0,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.532020700926821,0.535106452806212,0.658196082408484,0.304464949114599,0,0.21183207086382,0,0.32977250588296,0,0,0,0,0.582961673259701,1.48340241608408,0,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0.414599921413271,0,0.790839983952838,0,0.432021363287205,0.418176592028937,0.218362563746178,0.404593039154462,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.583353565032143,0.129159823477731,0.506868376472335,0.234714477291508,0.2604087696879,0.629156066554265,0.724752362478018,0.576060012515731,0.316011120628178,0,0.205421914329655,0,0,0.198681354781265,0,0.295379054349154,0.201932899896295,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0.183151624267265,0.214368379079066,1.00314420807073,4.51801474093653,1.38097570952153,1.14579102687879,1.3748254587495,2.05524755931193,0.755393897389701,0,2.2516060161211,0.906284817968409,0.51776031175182,0.207574695168353,0,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.561849044819294,0.384150914429216,0.287177344778066,0.952587382566147,0.347652977834566,1.54327376370964,0.412085900803307,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.752875043322645,0.592302255241736,0.182927972872773,0,0.135804113845862,0.561142271657738,0.355905054372522,0.788035859004508,0.818462086339379,0.309873682371932,0.385813221962283,0.749431733813838,0.701794825336225,1.07435527024149,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p3@Bicd1
}}

Revision as of 10:56, 5 August 2015

Short description:p3@Bicd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Bicd1_5end
Coexpression cluster:MCL_coexpression_mm9:826
Association with transcript: 0bp_to_NM_001112796, NM_009753, uc009euf.1, uc009eug.2, uc009euh.2, uc009eui.2_5end
EntrezGene:12121
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p3@Bicd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.69e-1533
neuronal stem cell3.69e-1533
neuroblast3.69e-1533
electrically signaling cell3.69e-1533
electrically responsive cell1.42e-1339
electrically active cell1.42e-1339
ectodermal cell5.92e-1344
neurectodermal cell5.92e-1344
autonomic neuron9.85e-139
neural cell9.13e-1243
embryonic cell4.91e-0770

Uber anatomy
Ontology termp-valuen
nervous system1.51e-3075
central nervous system6.91e-3073
ectoderm-derived structure2.42e-2895
ectoderm2.42e-2895
presumptive ectoderm2.42e-2895
neurectoderm1.89e-1864
neural plate1.89e-1864
presumptive neural plate1.89e-1864
regional part of nervous system3.96e-1854
ecto-epithelium6.16e-1873
neural tube1.16e-1552
neural rod1.16e-1552
future spinal cord1.16e-1552
neural keel1.16e-1552
structure with developmental contribution from neural crest1.33e-1392
autonomic nervous system9.85e-139
peripheral nervous system1.53e-1211
brain3.99e-1247
future brain3.99e-1247
regional part of brain3.74e-1146
posterior neural tube7.53e-1112
chordal neural plate7.53e-1112
gray matter7.54e-1134
pre-chordal neural plate1.22e-0849
anterior neural tube8.48e-0840
brain grey matter1.79e-0729
regional part of telencephalon1.79e-0729
telencephalon1.79e-0729
regional part of forebrain7.11e-0739
forebrain7.11e-0739
future forebrain7.11e-0739
spinal cord7.31e-076
dorsal region element7.31e-076
dorsum7.31e-076
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