FFCP PHASE1:Mm9::chr1:183282749..183282772,+: Difference between revisions
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{{FFCP|EntrezGene=72978|HGNC=|MCL_coexpression_id=2|UniProt=Q6ZWS4,Q9D6E1,G3XA11|association_with_transcript=0bp_to_ENSMUST00000027795,ENSMUST00000161880,NM_001160211,NM_001160212,NM_028408,uc007dxh.2,uc007dxi.2,uc011wxs.1_5end|description=CAGE_peak_2_at_Cnih3_5end|id=chr1:183282749..183282772,+|ontology_enrichment_celltype=CL:0000117!3.50e-14!23;CL:0000337!3.50e-14!23;CL:0000540!1.60e-11!33;CL:0000047!1.60e-11!33;CL:0000031!1.60e-11!33;CL:0000404!1.60e-11!33;CL:0000221!1.09e-09!44;CL:0000133!1.09e-09!44;CL:0002319!1.61e-09!43;CL:0000393!4.23e-08!39;CL:0000211!4.23e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.27e-16,23;CL:0000337,1.27e-16,23;CL:0000540,1.89e-11,33;CL:0000047,1.89e-11,33;CL:0000031,1.89e-11,33;CL:0000404,1.89e-11,33;CL:0002609,4.58e-09,6;CL:0000393,6.12e-09,39;CL:0000211,6.12e-09,39;CL:0002319,1.33e-08,43;CL:0000221,2.70e-08,44;CL:0000133,2.70e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!9.72e-24!34;UBERON:0000073!7.81e-23!75;UBERON:0001016!7.81e-23!75;UBERON:0001017!1.50e-22!73;UBERON:0005743!1.50e-22!73;UBERON:0001049!1.05e-21!52;UBERON:0005068!1.05e-21!52;UBERON:0006241!1.05e-21!52;UBERON:0007135!1.05e-21!52;UBERON:0000955!4.91e-21!50;UBERON:0006238!4.91e-21!50;UBERON:0002791!8.45e-21!29;UBERON:0003528!8.45e-21!29;UBERON:0001893!8.45e-21!29;UBERON:0002616!3.57e-20!49;UBERON:0000033!1.48e-19!63;UBERON:0003080!1.24e-18!40;UBERON:0004121!5.72e-18!102;UBERON:0000924!5.72e-18!102;UBERON:0006601!5.72e-18!102;UBERON:0002780!7.66e-18!39;UBERON:0001890!7.66e-18!39;UBERON:0006240!7.66e-18!39;UBERON:0003056!1.18e-16!49;UBERON:0000956!2.32e-16!21;UBERON:0001869!2.32e-16!21;UBERON:0000203!2.32e-16!21;UBERON:0002346!7.93e-16!71;UBERON:0003075!7.93e-16!71;UBERON:0007284!7.93e-16!71;UBERON:0002619!3.11e-13!17;UBERON:0002021!1.67e-09!10;UBERON:0000411!1.67e-09!10;UBERON:0001950!1.67e-09!10;UBERON:0007811!4.64e-09!86;UBERON:0000153!2.14e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.68e-35,54;UBERON:0002020,2.80e-34,34;UBERON:0001049,2.03e-32,52;UBERON:0005068,2.03e-32,52;UBERON:0006241,2.03e-32,52;UBERON:0007135,2.03e-32,52;UBERON:0001017,3.74e-31,73;UBERON:0003528,8.93e-31,29;UBERON:0002791,8.93e-31,29;UBERON:0001893,8.93e-31,29;UBERON:0001016,5.30e-30,75;UBERON:0000955,5.48e-29,47;UBERON:0006238,5.48e-29,47;UBERON:0000956,1.18e-28,21;UBERON:0001869,1.18e-28,21;UBERON:0000203,1.18e-28,21;UBERON:0002616,1.82e-27,46;UBERON:0003080,1.77e-26,40;UBERON:0002780,4.58e-25,39;UBERON:0001890,4.58e-25,39;UBERON:0006240,4.58e-25,39;UBERON:0002346,2.30e-24,64;UBERON:0003075,2.30e-24,64;UBERON:0007284,2.30e-24,64;UBERON:0010371,7.80e-23,73;UBERON:0002619,1.21e-22,17;UBERON:0004121,1.92e-22,95;UBERON:0000924,1.92e-22,95;UBERON:0006601,1.92e-22,95;UBERON:0003056,4.80e-20,49;UBERON:0002021,7.74e-17,10;UBERON:0000411,7.74e-17,10;UBERON:0001950,7.74e-17,10;UBERON:0010314,7.54e-15,92;UBERON:0000025,2.75e-09,114;UBERON:0004111,9.46e-09,122;UBERON:0001954,1.49e-07,7;UBERON:0003022,1.49e-07,7;UBERON:0002421,1.49e-07,7;UBERON:0000349,1.49e-07,7;UBERON:0002600,1.49e-07,7|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.837063261473815,0,0.523523743973798,0,0,0,0,0,0,0,0,1.09843091367236,0.194429899074283,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,8.50254820929517,7.69533848490637,8.2026734927039,1.14260393761521,1.76694832761291,2.69479758272899,1.34183659425531,2.75765635983006,2.20231761998777,4.72443150915195,3.5329502648936,0.923204014111357,0.640413505216868,1.04182674111352,0.837548997004143,5.06486349028512,2.90316670775939,0.883885756421003,2.13557521198654,1.86399445825301,0.075726193333184,0.377857800533928,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,1.25668024088073,0,0.11981512450592,0,0,11.5338792341713,8.6925114535539,7.79056983099759,29.0286614721102,22.5029602450691,6.02585329222724,9.5722345209977,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0,0,0,1.11218899690239,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,17.6643556793867,16.1560241435477,0,0,0.639864751605702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0.37898282354097,0,0.339490171550376,0,0.335012514883631,0.952174563544055,0.195133647857799,0.630540576424764,0.664394068946325,0.637819074629948,0,0.345369963731791,0,0,0,1.47529281905711,0,3.69266356971921,2.10981035865966,0,0,0.315508219416257,0,0.646270193198397,0,0,0,0.809621403349789,0,0.395287777946524,22.1711708331047,0,0.178065603667255,0.162886959353576,0.164970122972535,1.32745138339963,0,0.302323556964751,0,0,0,0,0.727067458955011,0.712994756769443,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.49465875882444,0.161464426695906,0,0.119372344003136,0,0,1.66882771809459,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0,0.954670618015114,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,10.1655331671072,11.0478056761722,10.3121192419091,15.4667864109319,17.1270629942661,12.0863023582352,12.8254275044043,16.6618845192962,15.406841905463,18.6393712230655,0,0,1.02440163452481,0.729320151204882,0.209613162627982,0.735374033800057,1.11123363900808,0.824140228955577,0.962757628775446,1.76888048234658,0.50695859978048,1.13175804831646,1.03005658216871,0.768301828858431,0.746661096422973,1.90517476513229,1.50649623728312,1.35036454324594,0.412085900803307,1.03039244094078,0,0.532427418478012,1.43061713968393,1.0174249164263,0.376437521661322,0.592302255241736,0.548783918618318,0.789209134313529,1.08643291076689,0,1.18635018124174,0.788035859004508,0,0.929621047115796,0.578719832943424,1.49886346762768,0.233931608445408,0.859484216193193,0.382576664137687,0,0|short_description=p2@Cnih3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72978 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6ZWS4,uniprot:Q9D6E1,uniprot:G3XA11 | |||
|association_with_transcript=0bp_to_ENSMUST00000027795,ENSMUST00000161880,NM_001160211,NM_001160212,NM_028408,uc007dxh.2,uc007dxi.2,uc011wxs.1_5end | |||
|cluster_id=chr1:183282749..183282772,+ | |||
|description=CAGE_peak_2_at_Cnih3_5end | |||
|id=chr1:183282749..183282772,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.50e-14!23;CL:0000337!3.50e-14!23;CL:0000540!1.60e-11!33;CL:0000047!1.60e-11!33;CL:0000031!1.60e-11!33;CL:0000404!1.60e-11!33;CL:0000221!1.09e-09!44;CL:0000133!1.09e-09!44;CL:0002319!1.61e-09!43;CL:0000393!4.23e-08!39;CL:0000211!4.23e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.27e-16,23;CL:0000337,1.27e-16,23;CL:0000540,1.89e-11,33;CL:0000047,1.89e-11,33;CL:0000031,1.89e-11,33;CL:0000404,1.89e-11,33;CL:0002609,4.58e-09,6;CL:0000393,6.12e-09,39;CL:0000211,6.12e-09,39;CL:0002319,1.33e-08,43;CL:0000221,2.70e-08,44;CL:0000133,2.70e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.72e-24!34;UBERON:0000073!7.81e-23!75;UBERON:0001016!7.81e-23!75;UBERON:0001017!1.50e-22!73;UBERON:0005743!1.50e-22!73;UBERON:0001049!1.05e-21!52;UBERON:0005068!1.05e-21!52;UBERON:0006241!1.05e-21!52;UBERON:0007135!1.05e-21!52;UBERON:0000955!4.91e-21!50;UBERON:0006238!4.91e-21!50;UBERON:0002791!8.45e-21!29;UBERON:0003528!8.45e-21!29;UBERON:0001893!8.45e-21!29;UBERON:0002616!3.57e-20!49;UBERON:0000033!1.48e-19!63;UBERON:0003080!1.24e-18!40;UBERON:0004121!5.72e-18!102;UBERON:0000924!5.72e-18!102;UBERON:0006601!5.72e-18!102;UBERON:0002780!7.66e-18!39;UBERON:0001890!7.66e-18!39;UBERON:0006240!7.66e-18!39;UBERON:0003056!1.18e-16!49;UBERON:0000956!2.32e-16!21;UBERON:0001869!2.32e-16!21;UBERON:0000203!2.32e-16!21;UBERON:0002346!7.93e-16!71;UBERON:0003075!7.93e-16!71;UBERON:0007284!7.93e-16!71;UBERON:0002619!3.11e-13!17;UBERON:0002021!1.67e-09!10;UBERON:0000411!1.67e-09!10;UBERON:0001950!1.67e-09!10;UBERON:0007811!4.64e-09!86;UBERON:0000153!2.14e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.68e-35,54;UBERON:0002020,2.80e-34,34;UBERON:0001049,2.03e-32,52;UBERON:0005068,2.03e-32,52;UBERON:0006241,2.03e-32,52;UBERON:0007135,2.03e-32,52;UBERON:0001017,3.74e-31,73;UBERON:0003528,8.93e-31,29;UBERON:0002791,8.93e-31,29;UBERON:0001893,8.93e-31,29;UBERON:0001016,5.30e-30,75;UBERON:0000955,5.48e-29,47;UBERON:0006238,5.48e-29,47;UBERON:0000956,1.18e-28,21;UBERON:0001869,1.18e-28,21;UBERON:0000203,1.18e-28,21;UBERON:0002616,1.82e-27,46;UBERON:0003080,1.77e-26,40;UBERON:0002780,4.58e-25,39;UBERON:0001890,4.58e-25,39;UBERON:0006240,4.58e-25,39;UBERON:0002346,2.30e-24,64;UBERON:0003075,2.30e-24,64;UBERON:0007284,2.30e-24,64;UBERON:0010371,7.80e-23,73;UBERON:0002619,1.21e-22,17;UBERON:0004121,1.92e-22,95;UBERON:0000924,1.92e-22,95;UBERON:0006601,1.92e-22,95;UBERON:0003056,4.80e-20,49;UBERON:0002021,7.74e-17,10;UBERON:0000411,7.74e-17,10;UBERON:0001950,7.74e-17,10;UBERON:0010314,7.54e-15,92;UBERON:0000025,2.75e-09,114;UBERON:0004111,9.46e-09,122;UBERON:0001954,1.49e-07,7;UBERON:0003022,1.49e-07,7;UBERON:0002421,1.49e-07,7;UBERON:0000349,1.49e-07,7;UBERON:0002600,1.49e-07,7 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.837063261473815,0,0.523523743973798,0,0,0,0,0,0,0,0,1.09843091367236,0.194429899074283,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,8.50254820929517,7.69533848490637,8.2026734927039,1.14260393761521,1.76694832761291,2.69479758272899,1.34183659425531,2.75765635983006,2.20231761998777,4.72443150915195,3.5329502648936,0.923204014111357,0.640413505216868,1.04182674111352,0.837548997004143,5.06486349028512,2.90316670775939,0.883885756421003,2.13557521198654,1.86399445825301,0.075726193333184,0.377857800533928,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,1.25668024088073,0,0.11981512450592,0,0,11.5338792341713,8.6925114535539,7.79056983099759,29.0286614721102,22.5029602450691,6.02585329222724,9.5722345209977,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0,0,0,1.11218899690239,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,17.6643556793867,16.1560241435477,0,0,0.639864751605702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0.37898282354097,0,0.339490171550376,0,0.335012514883631,0.952174563544055,0.195133647857799,0.630540576424764,0.664394068946325,0.637819074629948,0,0.345369963731791,0,0,0,1.47529281905711,0,3.69266356971921,2.10981035865966,0,0,0.315508219416257,0,0.646270193198397,0,0,0,0.809621403349789,0,0.395287777946524,22.1711708331047,0,0.178065603667255,0.162886959353576,0.164970122972535,1.32745138339963,0,0.302323556964751,0,0,0,0,0.727067458955011,0.712994756769443,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.49465875882444,0.161464426695906,0,0.119372344003136,0,0,1.66882771809459,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0,0.954670618015114,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,10.1655331671072,11.0478056761722,10.3121192419091,15.4667864109319,17.1270629942661,12.0863023582352,12.8254275044043,16.6618845192962,15.406841905463,18.6393712230655,0,0,1.02440163452481,0.729320151204882,0.209613162627982,0.735374033800057,1.11123363900808,0.824140228955577,0.962757628775446,1.76888048234658,0.50695859978048,1.13175804831646,1.03005658216871,0.768301828858431,0.746661096422973,1.90517476513229,1.50649623728312,1.35036454324594,0.412085900803307,1.03039244094078,0,0.532427418478012,1.43061713968393,1.0174249164263,0.376437521661322,0.592302255241736,0.548783918618318,0.789209134313529,1.08643291076689,0,1.18635018124174,0.788035859004508,0,0.929621047115796,0.578719832943424,1.49886346762768,0.233931608445408,0.859484216193193,0.382576664137687,0,0 | |||
|short_description=p2@Cnih3 | |||
}} |
Revision as of 10:24, 5 August 2015
Short description: | p2@Cnih3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cnih3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000027795, ENSMUST00000161880, NM_001160211, NM_001160212, NM_028408, uc007dxh.2, uc007dxi.2, uc011wxs.1_5end |
EntrezGene: | 72978 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.27e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.27e-16 | 23 |
neuron | 1.89e-11 | 33 |
neuronal stem cell | 1.89e-11 | 33 |
neuroblast | 1.89e-11 | 33 |
electrically signaling cell | 1.89e-11 | 33 |
neuron of cerebral cortex | 4.58e-09 | 6 |
electrically responsive cell | 6.12e-09 | 39 |
electrically active cell | 6.12e-09 | 39 |
neural cell | 1.33e-08 | 43 |
ectodermal cell | 2.70e-08 | 44 |
neurectodermal cell | 2.70e-08 | 44 |