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FFCP PHASE1:Mm9::chr1:181890905..181890910,+: Difference between revisions

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{{FFCP|EntrezGene=226751|HGNC=|UniProt=|association_with_transcript=14bp_to_ENSMUST00000134959_5end|description=CAGE_peak_2_at_Cdc42bpa_5end|id=chr1:181890905..181890910,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.78e-13!63;UBERON:0004111!8.66e-13!122;UBERON:0000025!2.24e-12!114;UBERON:0000955!5.03e-12!50;UBERON:0006238!5.03e-12!50;UBERON:0001049!7.25e-12!52;UBERON:0005068!7.25e-12!52;UBERON:0006241!7.25e-12!52;UBERON:0007135!7.25e-12!52;UBERON:0002616!1.90e-11!49;UBERON:0002346!2.00e-11!71;UBERON:0003075!2.00e-11!71;UBERON:0007284!2.00e-11!71;UBERON:0004121!6.99e-11!102;UBERON:0000924!6.99e-11!102;UBERON:0006601!6.99e-11!102;UBERON:0003056!1.69e-10!49;UBERON:0001017!9.59e-10!73;UBERON:0005743!9.59e-10!73;UBERON:0003080!1.04e-09!40;UBERON:0000073!1.41e-09!75;UBERON:0001016!1.41e-09!75;UBERON:0002780!3.79e-09!39;UBERON:0001890!3.79e-09!39;UBERON:0006240!3.79e-09!39;UBERON:0002020!5.56e-09!34;UBERON:0002791!5.19e-08!29;UBERON:0003528!5.19e-08!29;UBERON:0001893!5.19e-08!29;UBERON:0000475!9.04e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.09e-12,73;UBERON:0000073,1.36e-12,54;UBERON:0004111,2.03e-12,122;UBERON:0010314,2.39e-12,92;UBERON:0002346,4.90e-12,64;UBERON:0003075,4.90e-12,64;UBERON:0007284,4.90e-12,64;UBERON:0000025,5.28e-12,114;UBERON:0001049,6.27e-12,52;UBERON:0005068,6.27e-12,52;UBERON:0006241,6.27e-12,52;UBERON:0007135,6.27e-12,52;UBERON:0004121,3.22e-11,95;UBERON:0000924,3.22e-11,95;UBERON:0006601,3.22e-11,95;UBERON:0000955,5.97e-11,47;UBERON:0006238,5.97e-11,47;UBERON:0003056,1.50e-10,49;UBERON:0002616,2.19e-10,46;UBERON:0001017,7.24e-10,73;UBERON:0003080,9.31e-10,40;UBERON:0001016,1.07e-09,75;UBERON:0002780,3.43e-09,39;UBERON:0001890,3.43e-09,39;UBERON:0006240,3.43e-09,39;UBERON:0002020,5.04e-09,34;UBERON:0003528,4.76e-08,29;UBERON:0002791,4.76e-08,29;UBERON:0001893,4.76e-08,29|phase1_expression=4.32401887182944,1.39590163055744,0.909998478779072,0.30246421130683,0,0.503637815735669,1.16806320297763,0.129123323441576,0.422366166455,0,0,0.0797721589953364,0,0.0874204024189974,2.6648780945253,2.02475267389826,4.89693314689703,0.630924330716475,0.411343300817216,0,6.20816018102809,0.297872853602656,0,1.59992422793407,1.14704640533585,0.57423196411502,2.15380998079537,0.430942465371778,1.71021077510736,0.756090389279792,1.55211357458713,0.635030673459631,1.23012957516914,15.8481681015439,0.577703239502549,0.997407872150954,0.612508068787107,0,0,0,0,0.683045484958446,0.485510353031154,8.56098362233926,10.239070053171,4.03802854755699,0,0.65407546914134,1.31811709640683,1.94429899074283,1.39986421625363,0,0,0,0,4.3734104126111,3.43840127926508,3.6097046459421,4.85559506063035,4.23192783417626,1.90149421051854,0.338844532069132,0,0,0,0,1.19840044207362,1.53687322128622,3.00699875694585,5.26523159493594,3.99617426567626,3.42781181284564,2.65042249141936,5.51208596467293,2.87536413054709,1.83843757322004,4.40463523997555,10.0872997087298,8.90917892886212,3.56092976871523,4.20843160571084,4.68822033501084,8.37548997004143,14.069065250792,10.0846843532695,6.77645746589436,8.39992916714707,10.0655700745662,1.74170244666323,4.53429360640713,4.63783181922684,1.72084775396277,0.679971333707751,2.69851595818909,0.649776417447669,0.896053774194671,1.82577746171277,3.74946709671727,7.27400812888033,3.88673531961374,5.21120653173718,0,0,0,4.32982082022428,2.28023878927589,3.53867111510348,2.96878087269556,1.29468941823586,2.52351636410202,2.77576522825817,2.43572382649713,3.45923245884088,4.82312449768392,4.58595957829249,2.01066546127481,2.96633961281249,3.61498392299779,1.76922110389975,2.75003644910596,3.5334642953663,1.45462575940567,3.72783522436244,16.1029438356351,11.51956887474,1.53274233125155,0.479260498023681,0.599902730993408,0.381210681219194,13.481157546434,16.9275223042892,5.6544458450789,10.9509321721134,12.0186264945255,18.4931359658008,13.4660248346239,4.9901288286655,6.59356944233493,4.80173241023982,7.36546495602659,5.33493816147085,2.06911893990126,1.44049703844279,5.87748789559289,3.06164246180975,6.02134485338794,3.65436725782942,8.79591460512653,1.29340795759705,1.13463648100692,1.75951124163949,2.41115305670332,4.72680323683516,2.089512999133,5.96768195583036,4.97585667046233,1.40442637462647,0,0.284163499395593,2.48550927042602,4.69052119962192,3.6012412292203,2.60419209143731,5.90292695242211,5.39934895105824,2.55787339225449,4.56064782379353,2.45207218971056,1.97471819896177,3.94001913789829,3.89130285820108,4.5321996101853,3.07370161407471,3.35516046900929,11.1453672738987,4.21908910755066,0.330418782983798,1.58670339998127,3.41261200856374,4.41249676534833,1.67527699718721,0.80673409849337,3.11329261382818,1.14135375667535,0.474529061544512,3.45867804920423,6.53471542880701,6.76452004939913,4.48417400373976,3.59527763461689,5.61958929674205,2.19055400579804,0.758671603812327,5.02693455482807,2.25415471346161,2.8511185898344,6.0125271021964,4.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:226751
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=14bp_to_ENSMUST00000134959_5end
|cluster_id=chr1:181890905..181890910,+
|description=CAGE_peak_2_at_Cdc42bpa_5end
|id=chr1:181890905..181890910,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!5.78e-13!63;UBERON:0004111!8.66e-13!122;UBERON:0000025!2.24e-12!114;UBERON:0000955!5.03e-12!50;UBERON:0006238!5.03e-12!50;UBERON:0001049!7.25e-12!52;UBERON:0005068!7.25e-12!52;UBERON:0006241!7.25e-12!52;UBERON:0007135!7.25e-12!52;UBERON:0002616!1.90e-11!49;UBERON:0002346!2.00e-11!71;UBERON:0003075!2.00e-11!71;UBERON:0007284!2.00e-11!71;UBERON:0004121!6.99e-11!102;UBERON:0000924!6.99e-11!102;UBERON:0006601!6.99e-11!102;UBERON:0003056!1.69e-10!49;UBERON:0001017!9.59e-10!73;UBERON:0005743!9.59e-10!73;UBERON:0003080!1.04e-09!40;UBERON:0000073!1.41e-09!75;UBERON:0001016!1.41e-09!75;UBERON:0002780!3.79e-09!39;UBERON:0001890!3.79e-09!39;UBERON:0006240!3.79e-09!39;UBERON:0002020!5.56e-09!34;UBERON:0002791!5.19e-08!29;UBERON:0003528!5.19e-08!29;UBERON:0001893!5.19e-08!29;UBERON:0000475!9.04e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.09e-12,73;UBERON:0000073,1.36e-12,54;UBERON:0004111,2.03e-12,122;UBERON:0010314,2.39e-12,92;UBERON:0002346,4.90e-12,64;UBERON:0003075,4.90e-12,64;UBERON:0007284,4.90e-12,64;UBERON:0000025,5.28e-12,114;UBERON:0001049,6.27e-12,52;UBERON:0005068,6.27e-12,52;UBERON:0006241,6.27e-12,52;UBERON:0007135,6.27e-12,52;UBERON:0004121,3.22e-11,95;UBERON:0000924,3.22e-11,95;UBERON:0006601,3.22e-11,95;UBERON:0000955,5.97e-11,47;UBERON:0006238,5.97e-11,47;UBERON:0003056,1.50e-10,49;UBERON:0002616,2.19e-10,46;UBERON:0001017,7.24e-10,73;UBERON:0003080,9.31e-10,40;UBERON:0001016,1.07e-09,75;UBERON:0002780,3.43e-09,39;UBERON:0001890,3.43e-09,39;UBERON:0006240,3.43e-09,39;UBERON:0002020,5.04e-09,34;UBERON:0003528,4.76e-08,29;UBERON:0002791,4.76e-08,29;UBERON:0001893,4.76e-08,29
|phase1_expression=4.32401887182944,1.39590163055744,0.909998478779072,0.30246421130683,0,0.503637815735669,1.16806320297763,0.129123323441576,0.422366166455,0,0,0.0797721589953364,0,0.0874204024189974,2.6648780945253,2.02475267389826,4.89693314689703,0.630924330716475,0.411343300817216,0,6.20816018102809,0.297872853602656,0,1.59992422793407,1.14704640533585,0.57423196411502,2.15380998079537,0.430942465371778,1.71021077510736,0.756090389279792,1.55211357458713,0.635030673459631,1.23012957516914,15.8481681015439,0.577703239502549,0.997407872150954,0.612508068787107,0,0,0,0,0.683045484958446,0.485510353031154,8.56098362233926,10.239070053171,4.03802854755699,0,0.65407546914134,1.31811709640683,1.94429899074283,1.39986421625363,0,0,0,0,4.3734104126111,3.43840127926508,3.6097046459421,4.85559506063035,4.23192783417626,1.90149421051854,0.338844532069132,0,0,0,0,1.19840044207362,1.53687322128622,3.00699875694585,5.26523159493594,3.99617426567626,3.42781181284564,2.65042249141936,5.51208596467293,2.87536413054709,1.83843757322004,4.40463523997555,10.0872997087298,8.90917892886212,3.56092976871523,4.20843160571084,4.68822033501084,8.37548997004143,14.069065250792,10.0846843532695,6.77645746589436,8.39992916714707,10.0655700745662,1.74170244666323,4.53429360640713,4.63783181922684,1.72084775396277,0.679971333707751,2.69851595818909,0.649776417447669,0.896053774194671,1.82577746171277,3.74946709671727,7.27400812888033,3.88673531961374,5.21120653173718,0,0,0,4.32982082022428,2.28023878927589,3.53867111510348,2.96878087269556,1.29468941823586,2.52351636410202,2.77576522825817,2.43572382649713,3.45923245884088,4.82312449768392,4.58595957829249,2.01066546127481,2.96633961281249,3.61498392299779,1.76922110389975,2.75003644910596,3.5334642953663,1.45462575940567,3.72783522436244,16.1029438356351,11.51956887474,1.53274233125155,0.479260498023681,0.599902730993408,0.381210681219194,13.481157546434,16.9275223042892,5.6544458450789,10.9509321721134,12.0186264945255,18.4931359658008,13.4660248346239,4.9901288286655,6.59356944233493,4.80173241023982,7.36546495602659,5.33493816147085,2.06911893990126,1.44049703844279,5.87748789559289,3.06164246180975,6.02134485338794,3.65436725782942,8.79591460512653,1.29340795759705,1.13463648100692,1.75951124163949,2.41115305670332,4.72680323683516,2.089512999133,5.96768195583036,4.97585667046233,1.40442637462647,0,0.284163499395593,2.48550927042602,4.69052119962192,3.6012412292203,2.60419209143731,5.90292695242211,5.39934895105824,2.55787339225449,4.56064782379353,2.45207218971056,1.97471819896177,3.94001913789829,3.89130285820108,4.5321996101853,3.07370161407471,3.35516046900929,11.1453672738987,4.21908910755066,0.330418782983798,1.58670339998127,3.41261200856374,4.41249676534833,1.67527699718721,0.80673409849337,3.11329261382818,1.14135375667535,0.474529061544512,3.45867804920423,6.53471542880701,6.76452004939913,4.48417400373976,3.59527763461689,5.61958929674205,2.19055400579804,0.758671603812327,5.02693455482807,2.25415471346161,2.8511185898344,6.0125271021964,4.1380133735288,4.67950374719504,9.15182917473533,4.39596437955849,3.70191491765402,2.07516838961004,1.83529616287703,1.96558995113203,2.47348323623339,1.62288097110802,0.72353147925725,1.78238096246994,1.43848068725405,2.43202840162553,2.47105271869273,33.0666875012915,4.46569137202204,4.36852742360385,2.77836765741823,2.69096120282868,0.964887042726734,7.02062122633098,0.568474235311454,3.09633455239849,4.92260748748046,7.27539769694356,2.51259386162724,4.28478553594825,7.41507861859636,5.99013547603526,9.96591103419487,3.34855014180723,10.3233888270915,9.15230403889247,10.4147322178688,0,0,2.45882136509518,3.31124095565679,11.0779907091576,12.0728037189969,1.96721934452011,3.53459298086122,3.15508219416257,1.95219372148319,2.36965737506079,1.43381278771531,4.67877215573028,2.26461224631066,2.83367491172426,2.63030272120181,3.55759000151871,13.1741739732941,2.12910127812403,2.31485284767432,4.39794790254655,4.94910368917606,6.63725691699814,2.6705869977048,2.72091201268276,4.52652191414155,0.885905678642318,1.84461088766356,5.42699415653264,5.08947221268508,5.34746067577082,4.74055136903724,4.21674434299995,1.03135543248187,10.2131881726136,4.50152735078276,1.81102157295856,4.71541477069503,1.77340233642274,4.63758925765383,4.44282355625727,3.34911444026059,3.75474732901937,3.81297727554876,1.10264199027481,3.46261131177108,5.16686165426898,2.77439454669517,5.72987251215055,4.10352249362653,3.49777003955821,8.90041449650446,1.70870880797853,4.54051109519089,3.33350149265481,5.08594833912666,6.01454601972511,4.57556346413045,1.35982743995084,1.53946597556024,1.38199973804424,2.86401185404534,1.10717597753397,3.04979200690273,4.86024033698106,5.01811910434725,6.11415178489297,5.66430254816247,3.71940550764012,5.75863072364865,9.98035294346805,2.4853572523477,3.38215763210514,3.58839710505549,2.97825282822776,4.66682852025714,3.48731523389874,6.25137664315879,3.87278887530988,2.73429208172295,4.29923312145414,6.52277126230216,2.88030006257865,0.316011120628178,2.02725215290164,2.15693010046137,1.94881234466693,1.61124026100733,0.39736270956253,0.600977247599844,0.590758108698309,1.00966449948148,0.990688486514998,1.91569751759997,1.46186821109629,0.288635524920988,0.467507608726276,3.40095575422817,0.221985953374065,2.69141569828427,1.67884616364078,6.18206700903009,3.94133198447482,2.19781949120718,2.14368379079066,6.01886524842436,6.7770221114048,7.36520378411483,6.87474616127276,7.56154002312225,8.90607275701835,10.5755145634558,6.07520250208625,7.65546045481175,10.4222754066367,12.4262474820437,3.32119512269365,0.798049746802062,2.39027048055788,4.86213434136588,2.30574478890781,0.367687016900028,2.44471400581777,2.26638562962784,1.92551525755089,1.26348605881899,2.5347929989024,1.88626341386076,3.93294331373506,4.28968521112624,2.81433797882505,1.90517476513229,4.05595140806994,3.08654752741928,4.53294490883637,2.50238164228475,4.80016953339582,4.61437096014278,5.00715998889374,3.48831399917588,3.85848459702856,4.90764725771724,3.84148743032822,2.36762740294059,3.93831930152999,1.12228454331548,1.54225523561426,2.9551344712669,3.27384834535751,3.71848418846318,3.2794123866794,2.49810577937946,2.33931608445408,2.36358159453128,5.54736162999646,2.42650561031467,2.55054619182464
|short_description=p2@Cdc42bpa
}}

Revision as of 09:49, 5 August 2015

Short description:p2@Cdc42bpa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cdc42bpa_5end
Coexpression cluster:NA
Association with transcript: 14bp_to_ENSMUST00000134959_5end
EntrezGene:226751
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Cdc42bpa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.56
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.51
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.07
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F94.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B216.10
cerebellum, neonate N30.CNhs11135.1395-42I211.52
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A413.48
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F15.65
cortex, adult.CNhs10473.12-14D510.95
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F218.49
diencephalon, neonate N30.CNhs11201.1388-42B213.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.99
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.59
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G47.37
eyeball, embryo E12.CNhs11016.345-16C65.33
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C63.06
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C85.90
heart, embryo E16.CNhs11021.457-17C65.40
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G13.94
heart, neonate N16.CNhs11209.782-15G13.89
heart, neonate N20.CNhs11127.821-26I64.53
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D23.36
hippocampus, adult.CNhs10478.13-16E811.15
hippocampus, neonate N00.CNhs11228.627-43G14.22
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F26.76
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E35.62
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F85.03
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C76.01
kidney, neonate N00.CNhs11214.646-21G74.14
kidney, neonate N10.CNhs11206.758-6D54.68
kidney, neonate N20.CNhs11113.832-19I19.15
kidney, neonate N25.CNhs11122.1353-25F34.40
kidney, neonate N30.CNhs11203.1385-42H13.70
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A833.07
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B17.02
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B67.28
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C67.42
lung, neonate N06.CNhs11212.683-20E55.99
lung, neonate N07.CNhs11111.715-19A39.97
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A410.32
lung, neonate N25.CNhs11119.1359-25C79.15
lung, neonate N30.CNhs11133.1394-42H210.41
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C211.08
medulla oblongata, neonate N30.CNhs11200.1396-42A312.07
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I913.17
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G64.95
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E54.53
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G45.17
skin, neonate N03.CNhs11215.662-22H32.77
skin, neonate N06.CNhs11097.693-20I55.73
skin, neonate N10.CNhs11108.762-6C44.10
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D15.09
spleen, neonate N20.CNhs11112.824-19H16.01
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D44.86
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B85.66
stomach, neonate N07.CNhs11210.718-18A93.72
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I19.98
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F53.59
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G56.25
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D94.30
testis, neonate N20.CNhs11110.839-18H36.52
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I22.16
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.69
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E46.18
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I83.32
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ecto-epithelium1.09e-1273
regional part of nervous system1.36e-1254
anatomical conduit2.03e-12122
structure with developmental contribution from neural crest2.39e-1292
neurectoderm4.90e-1264
neural plate4.90e-1264
presumptive neural plate4.90e-1264
tube5.28e-12114
neural tube6.27e-1252
neural rod6.27e-1252
future spinal cord6.27e-1252
neural keel6.27e-1252
ectoderm-derived structure3.22e-1195
ectoderm3.22e-1195
presumptive ectoderm3.22e-1195
brain5.97e-1147
future brain5.97e-1147
pre-chordal neural plate1.50e-1049
regional part of brain2.19e-1046
central nervous system7.24e-1073
anterior neural tube9.31e-1040
nervous system1.07e-0975
regional part of forebrain3.43e-0939
forebrain3.43e-0939
future forebrain3.43e-0939
gray matter5.04e-0934
brain grey matter4.76e-0829
regional part of telencephalon4.76e-0829
telencephalon4.76e-0829
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