FFCP PHASE1:Mm9::chr7:53652714..53652791,+: Difference between revisions
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{{FFCP|EntrezGene=16502|HGNC=|MCL_coexpression_id=42|UniProt=E9PVV3|association_with_transcript=-226bp_to_ENSMUST00000160433_5end|description=CAGE_peak_2_at_Kcnc1_5end|id=chr7:53652714..53652791,+|ontology_enrichment_celltype=CL:0000117!8.71e-14!23;CL:0000337!8.71e-14!23;CL:0000540!4.27e-13!33;CL:0000047!4.27e-13!33;CL:0000031!4.27e-13!33;CL:0000404!4.27e-13!33;CL:0000221!1.86e-11!44;CL:0000133!1.86e-11!44;CL:0002319!2.36e-11!43;CL:0000393!1.73e-09!39;CL:0000211!1.73e-09!39;CL:0000055!3.28e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.12e-09,23;CL:0000337,1.12e-09,23;CL:0000540,6.56e-08,33;CL:0000047,6.56e-08,33;CL:0000031,6.56e-08,33;CL:0000404,6.56e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.49e-32!73;UBERON:0005743!6.49e-32!73;UBERON:0000073!3.16e-31!75;UBERON:0001016!3.16e-31!75;UBERON:0001049!2.06e-27!52;UBERON:0005068!2.06e-27!52;UBERON:0006241!2.06e-27!52;UBERON:0007135!2.06e-27!52;UBERON:0000955!1.15e-26!50;UBERON:0006238!1.15e-26!50;UBERON:0004121!2.32e-26!102;UBERON:0000924!2.32e-26!102;UBERON:0006601!2.32e-26!102;UBERON:0002616!1.03e-25!49;UBERON:0000033!2.43e-25!63;UBERON:0002346!6.66e-24!71;UBERON:0003075!6.66e-24!71;UBERON:0007284!6.66e-24!71;UBERON:0002020!4.98e-20!34;UBERON:0003080!1.67e-19!40;UBERON:0003056!5.62e-19!49;UBERON:0002780!1.38e-18!39;UBERON:0001890!1.38e-18!39;UBERON:0006240!1.38e-18!39;UBERON:0002791!1.07e-16!29;UBERON:0003528!1.07e-16!29;UBERON:0001893!1.07e-16!29;UBERON:0007811!1.22e-13!86;UBERON:0000153!5.71e-12!94;UBERON:0000956!1.63e-11!21;UBERON:0001869!1.63e-11!21;UBERON:0000203!1.63e-11!21;UBERON:0002619!7.14e-10!17;UBERON:0002021!4.67e-09!10;UBERON:0000411!4.67e-09!10;UBERON:0001950!4.67e-09!10;UBERON:0003076!2.04e-08!12;UBERON:0003057!2.04e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.48e-37,54;UBERON:0001017,2.66e-35,73;UBERON:0001016,4.56e-34,75;UBERON:0001049,1.70e-33,52;UBERON:0005068,1.70e-33,52;UBERON:0006241,1.70e-33,52;UBERON:0007135,1.70e-33,52;UBERON:0002346,7.35e-31,64;UBERON:0003075,7.35e-31,64;UBERON:0007284,7.35e-31,64;UBERON:0004121,3.23e-29,95;UBERON:0000924,3.23e-29,95;UBERON:0006601,3.23e-29,95;UBERON:0000955,3.95e-29,47;UBERON:0006238,3.95e-29,47;UBERON:0002616,1.51e-27,46;UBERON:0010371,8.20e-26,73;UBERON:0003080,4.85e-21,40;UBERON:0010314,1.03e-19,92;UBERON:0002780,1.50e-19,39;UBERON:0001890,1.50e-19,39;UBERON:0006240,1.50e-19,39;UBERON:0002020,1.98e-19,34;UBERON:0003056,4.44e-19,49;UBERON:0002021,2.62e-16,10;UBERON:0000411,2.62e-16,10;UBERON:0001950,2.62e-16,10;UBERON:0003528,1.70e-15,29;UBERON:0002791,1.70e-15,29;UBERON:0001893,1.70e-15,29;UBERON:0003076,2.66e-13,12;UBERON:0003057,2.66e-13,12;UBERON:0002619,1.52e-10,17;UBERON:0000025,3.08e-10,114;UBERON:0000956,7.37e-10,21;UBERON:0001869,7.37e-10,21;UBERON:0000203,7.37e-10,21;UBERON:0004111,8.63e-10,122;UBERON:0011216,4.44e-09,194;UBERON:0004733,5.51e-08,6;UBERON:0004732,5.51e-08,6;UBERON:0002028,5.51e-08,6;UBERON:0007277,5.51e-08,6;UBERON:0002950,6.76e-08,4;UBERON:0001891,6.76e-08,4;UBERON:0009616,6.76e-08,4;UBERON:0010286,6.76e-08,4;UBERON:0002420,3.85e-07,8;UBERON:0007245,3.85e-07,8;UBERON:0010009,3.85e-07,8;UBERON:0010011,3.85e-07,8;UBERON:0000454,3.85e-07,8;UBERON:0002240,7.40e-07,6;UBERON:0005174,7.40e-07,6;UBERON:0001137,7.40e-07,6|phase1_expression=0,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0.194429899074283,0.279972843250725,0,0,0,0.336093799142464,0,0,0,1.21389876515759,0.528990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,0,0.414758449233911,0.405017814995072,0.420649922702764,3.71346279724945,1.98781686856452,0.367472397644862,0.287536413054709,0.919218786610021,17.6185409599022,10.5980490610706,12.2885226604995,0.659431438650969,0.731901148819277,1.56274011167028,9.77140496504833,6.19038871034848,7.94550888439413,4.41942878210502,2.70506193518296,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0.884610551949874,1.13236794963186,1.54589062922275,1.45462575940567,0,24.0080253549469,86.08259650033,0.255457055208591,0,0,0,17.6752954497691,11.4375150704657,1.00523481690292,13.5582969749976,8.95004100656157,12.259494629014,7.46309810111685,0,0.746441823660558,0,3.57751155007006,0,0,0,0,0.340182495756639,0.640568601424249,0.749613796477831,5.17406741478031,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14985825118033,0.823236899034275,0.991256348951394,0.264450566663544,0.213288250535234,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7706542788769,11.4867452860359,0,5.30188947129183,0.631016438832513,0,2.15423397732799,0.716906393857656,0.668396022247182,0,1.21443210502468,0.292255857911312,0,13.4954952897159,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,1.41872186913819,0.891844088010353,1.31639216481697,1.2178597964584,0,0,0,0.65954501176592,0.645857706783622,0,0,0,0,11.6817940266621,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85441652145859,0,0,0,0.19318959403219,0,0.183151624267265,0,0,3.95326289831947,3.68260189205742,6.30185064783336,6.01486138202907,10.9613203163303,10.5755145634558,7.42524750254986,7.20513925158753,7.25027854374727,10.8729665467882,0,0.399024873401031,0,0.243106717068294,0,0.551530525350042,0.44449345560323,0.618105171716683,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.512201219238954,0.34461281373368,0,0.927074607558844,0.192909220463705,0.412085900803307,0.441596760403192,0,0.532427418478012,0,0.290692833264657,0.188218760830661,0.592302255241736,0.182927972872773,0.263069711437843,0.271608227691724,1.12228454331548,0.355905054372522,0.29551344712669,0,0.309873682371932,0.385813221962283,0.999242311751784,0.467863216890817,0.859484216193193,2.86932498103265,0.441182838239031,0.927471342481686|short_description=p2@Kcnc1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16502 | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PVV3 | |||
|association_with_transcript=-226bp_to_ENSMUST00000160433_5end | |||
|cluster_id=chr7:53652714..53652791,+ | |||
|description=CAGE_peak_2_at_Kcnc1_5end | |||
|id=chr7:53652714..53652791,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.71e-14!23;CL:0000337!8.71e-14!23;CL:0000540!4.27e-13!33;CL:0000047!4.27e-13!33;CL:0000031!4.27e-13!33;CL:0000404!4.27e-13!33;CL:0000221!1.86e-11!44;CL:0000133!1.86e-11!44;CL:0002319!2.36e-11!43;CL:0000393!1.73e-09!39;CL:0000211!1.73e-09!39;CL:0000055!3.28e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.12e-09,23;CL:0000337,1.12e-09,23;CL:0000540,6.56e-08,33;CL:0000047,6.56e-08,33;CL:0000031,6.56e-08,33;CL:0000404,6.56e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.49e-32!73;UBERON:0005743!6.49e-32!73;UBERON:0000073!3.16e-31!75;UBERON:0001016!3.16e-31!75;UBERON:0001049!2.06e-27!52;UBERON:0005068!2.06e-27!52;UBERON:0006241!2.06e-27!52;UBERON:0007135!2.06e-27!52;UBERON:0000955!1.15e-26!50;UBERON:0006238!1.15e-26!50;UBERON:0004121!2.32e-26!102;UBERON:0000924!2.32e-26!102;UBERON:0006601!2.32e-26!102;UBERON:0002616!1.03e-25!49;UBERON:0000033!2.43e-25!63;UBERON:0002346!6.66e-24!71;UBERON:0003075!6.66e-24!71;UBERON:0007284!6.66e-24!71;UBERON:0002020!4.98e-20!34;UBERON:0003080!1.67e-19!40;UBERON:0003056!5.62e-19!49;UBERON:0002780!1.38e-18!39;UBERON:0001890!1.38e-18!39;UBERON:0006240!1.38e-18!39;UBERON:0002791!1.07e-16!29;UBERON:0003528!1.07e-16!29;UBERON:0001893!1.07e-16!29;UBERON:0007811!1.22e-13!86;UBERON:0000153!5.71e-12!94;UBERON:0000956!1.63e-11!21;UBERON:0001869!1.63e-11!21;UBERON:0000203!1.63e-11!21;UBERON:0002619!7.14e-10!17;UBERON:0002021!4.67e-09!10;UBERON:0000411!4.67e-09!10;UBERON:0001950!4.67e-09!10;UBERON:0003076!2.04e-08!12;UBERON:0003057!2.04e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.48e-37,54;UBERON:0001017,2.66e-35,73;UBERON:0001016,4.56e-34,75;UBERON:0001049,1.70e-33,52;UBERON:0005068,1.70e-33,52;UBERON:0006241,1.70e-33,52;UBERON:0007135,1.70e-33,52;UBERON:0002346,7.35e-31,64;UBERON:0003075,7.35e-31,64;UBERON:0007284,7.35e-31,64;UBERON:0004121,3.23e-29,95;UBERON:0000924,3.23e-29,95;UBERON:0006601,3.23e-29,95;UBERON:0000955,3.95e-29,47;UBERON:0006238,3.95e-29,47;UBERON:0002616,1.51e-27,46;UBERON:0010371,8.20e-26,73;UBERON:0003080,4.85e-21,40;UBERON:0010314,1.03e-19,92;UBERON:0002780,1.50e-19,39;UBERON:0001890,1.50e-19,39;UBERON:0006240,1.50e-19,39;UBERON:0002020,1.98e-19,34;UBERON:0003056,4.44e-19,49;UBERON:0002021,2.62e-16,10;UBERON:0000411,2.62e-16,10;UBERON:0001950,2.62e-16,10;UBERON:0003528,1.70e-15,29;UBERON:0002791,1.70e-15,29;UBERON:0001893,1.70e-15,29;UBERON:0003076,2.66e-13,12;UBERON:0003057,2.66e-13,12;UBERON:0002619,1.52e-10,17;UBERON:0000025,3.08e-10,114;UBERON:0000956,7.37e-10,21;UBERON:0001869,7.37e-10,21;UBERON:0000203,7.37e-10,21;UBERON:0004111,8.63e-10,122;UBERON:0011216,4.44e-09,194;UBERON:0004733,5.51e-08,6;UBERON:0004732,5.51e-08,6;UBERON:0002028,5.51e-08,6;UBERON:0007277,5.51e-08,6;UBERON:0002950,6.76e-08,4;UBERON:0001891,6.76e-08,4;UBERON:0009616,6.76e-08,4;UBERON:0010286,6.76e-08,4;UBERON:0002420,3.85e-07,8;UBERON:0007245,3.85e-07,8;UBERON:0010009,3.85e-07,8;UBERON:0010011,3.85e-07,8;UBERON:0000454,3.85e-07,8;UBERON:0002240,7.40e-07,6;UBERON:0005174,7.40e-07,6;UBERON:0001137,7.40e-07,6 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0.194429899074283,0.279972843250725,0,0,0,0.336093799142464,0,0,0,1.21389876515759,0.528990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,0,0.414758449233911,0.405017814995072,0.420649922702764,3.71346279724945,1.98781686856452,0.367472397644862,0.287536413054709,0.919218786610021,17.6185409599022,10.5980490610706,12.2885226604995,0.659431438650969,0.731901148819277,1.56274011167028,9.77140496504833,6.19038871034848,7.94550888439413,4.41942878210502,2.70506193518296,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0.884610551949874,1.13236794963186,1.54589062922275,1.45462575940567,0,24.0080253549469,86.08259650033,0.255457055208591,0,0,0,17.6752954497691,11.4375150704657,1.00523481690292,13.5582969749976,8.95004100656157,12.259494629014,7.46309810111685,0,0.746441823660558,0,3.57751155007006,0,0,0,0,0.340182495756639,0.640568601424249,0.749613796477831,5.17406741478031,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14985825118033,0.823236899034275,0.991256348951394,0.264450566663544,0.213288250535234,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7706542788769,11.4867452860359,0,5.30188947129183,0.631016438832513,0,2.15423397732799,0.716906393857656,0.668396022247182,0,1.21443210502468,0.292255857911312,0,13.4954952897159,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,1.41872186913819,0.891844088010353,1.31639216481697,1.2178597964584,0,0,0,0.65954501176592,0.645857706783622,0,0,0,0,11.6817940266621,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85441652145859,0,0,0,0.19318959403219,0,0.183151624267265,0,0,3.95326289831947,3.68260189205742,6.30185064783336,6.01486138202907,10.9613203163303,10.5755145634558,7.42524750254986,7.20513925158753,7.25027854374727,10.8729665467882,0,0.399024873401031,0,0.243106717068294,0,0.551530525350042,0.44449345560323,0.618105171716683,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.512201219238954,0.34461281373368,0,0.927074607558844,0.192909220463705,0.412085900803307,0.441596760403192,0,0.532427418478012,0,0.290692833264657,0.188218760830661,0.592302255241736,0.182927972872773,0.263069711437843,0.271608227691724,1.12228454331548,0.355905054372522,0.29551344712669,0,0.309873682371932,0.385813221962283,0.999242311751784,0.467863216890817,0.859484216193193,2.86932498103265,0.441182838239031,0.927471342481686 | |||
|short_description=p2@Kcnc1 | |||
}} |
Revision as of 09:38, 5 August 2015
Short description: | p2@Kcnc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kcnc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | -226bp_to_ENSMUST00000160433_5end |
EntrezGene: | 16502 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.12e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-09 | 23 |
neuron | 6.56e-08 | 33 |
neuronal stem cell | 6.56e-08 | 33 |
neuroblast | 6.56e-08 | 33 |
electrically signaling cell | 6.56e-08 | 33 |