Personal tools

FFCP PHASE1:Mm9::chr11:108286556..108286618,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=76380|HGNC=|MCL_coexpression_id=417|UniProt=Q5PR68,Q3TV83|association_with_transcript=0bp_to_ENSMUST00000061287,ENSMUST00000100297,ENSMUST00000149683,NM_029606,uc007mbq.1,uc007mbr.1_5end|description=CAGE_peak_1_at_Ccdc46_5end|id=chr11:108286556..108286618,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.31e-10!333;UBERON:0000922!3.22e-08!328;UBERON:0000464!8.32e-08!57;UBERON:0005157!6.92e-07!27|ontology_enrichment_uberon_v019_2=|phase1_expression=7.8472935081349,0,0,0.30246421130683,0,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0.999329285446988,0.202475267389826,0,0.157731082679119,0,0.42438965179803,4.93251082876205,0.198581902401771,0,0.47997726838022,0.45881856213434,0,0,0.430942465371778,0.190023419456374,0.504060259519861,0.665191531965914,0,0,0,2.59966457776147,1.82858109894342,2.6542016314108,0,0.7813353445238,0.523523743973798,0,0,0,4.15459499319405,2.53442328048786,2.20256102594018,1.56478268869608,0.872100625521786,1.09843091367236,0.972149495371417,1.25987779462826,0,0,0,0,2.05807548828758,3.15186783932632,2.06268836910977,1.01158230429799,1.05798195854407,0,2.03306719241479,0,0.899899717281399,0,0.7104801149461,1.19840044207362,0.768436610643109,3.21437798156281,1.4850653216486,2.10324961351382,0.856952953211411,0.883474163806454,2.57230678351403,1.62937300731002,1.83843757322004,1.10115880999389,0.893811366596314,1.0752457327937,0.263772575460388,0.640413505216868,1.04182674111352,0.279182999001381,1.12552522006336,1.22238598221448,2.06240009831567,2.42031857358475,1.1183966749518,0.681535739998656,4.60986516651392,10.4351215932604,0.860423876981386,0,0.539703191637817,0,1.34408066129201,0.983110940922263,1.87473354835864,2.33807404142582,1.06001872353102,5.49289337129054,2.56652954828636,7.64415719119937,0,0.649473123033642,2.28023878927589,1.01104889002957,2.05530983494308,2.84831672011889,8.16431764856536,7.45986905094384,3.65358573974569,6.22661842591358,9.04335843315735,15.6392980490487,6.03199638382442,2.96633961281249,4.916378135277,2.65383165584962,12.2942805960031,2.65009822152472,3.87900202508178,1.86391761218122,0.292780797011547,1.25668024088073,1.27728527604296,0.599075622529601,0.599902730993408,0.381210681219194,1.49790639404823,2.28750301409313,2.51308704225729,2.25971616249959,2.30143911597297,2.0778804455956,2.43361894601636,19.8586759508117,3.98102305952298,4.80173241023982,2.10441855886474,15.0939713836736,7.58676944630461,14.7650946440386,18.9888070473001,24.1529571987214,22.5480147701336,15.9292931751539,7.76110112217047,3.66465587985832,15.5066985737612,15.6596500505914,7.89104636739269,16.9608822027615,16.716103993064,18.7261744131229,16.1217756122979,0,0.257347907114715,0.284163499395593,10.1491628542396,10.3191466391682,9.36322719597277,9.94327889457883,11.4123254413494,13.2669717083145,9.99895962426754,7.77992864058896,13.5447797145917,11.1900697941167,6.56669856316381,5.35054143002648,5.99419948443863,5.26920276698522,6.57611451925822,1.47202963994889,5.14523061896422,0,0.264450566663544,13.8637362847902,16.7210403739516,12.1135413642768,7.86565746031036,7.33847544688072,4.1849637744763,1.42358718463353,2.79988223030818,3.77002813200404,6.36660710531683,5.26403035221624,1.79763881730844,1.51296634912286,1.7922714592893,2.27601481143698,12.9100819248994,13.5249282807697,13.4409876377907,9.89157684554891,15.4298803758701,12.7737804991,6.9376769550413,5.65195420228949,4.56569506510662,0.296452627087149,3.67059232575407,3.14494392181125,3.14806957338795,2.23146133527353,2.41177159752417,2.03700681425136,2.30156909960649,6.16113861745134,1.64736847912849,15.814502718009,5.95425516269605,5.30464044294753,3.53610429125956,2.33216637578486,1.92977408545347,4.98833613449833,11.7484675297701,19.3928321966011,15.9560380628677,19.2446003596572,17.0856382590652,13.8065311713888,7.80534591431195,19.0738524368491,15.2810635857655,17.0616602463511,7.37384916220821,7.9435091658312,10.4147322178688,1.50791283939272,0.54390568381871,3.93411418415229,6.62248191131358,2.24770825982909,1.52375192569864,3.27869890753351,6.05930225290495,5.36363973007636,7.80877488593277,9.90947629570875,7.88597033243422,9.80314165962534,12.1722908239198,7.69140333182299,3.21481443702443,8.69633111482352,1.28528526568723,7.94864477166304,11.0400674273698,19.3835481630756,9.56826713240706,3.98235415019888,6.31229654002952,5.44182402536552,6.78978287121233,2.06711325016541,7.37844355065426,10.3371317267288,11.9966130727577,11.0514187299264,5.37262488490887,4.21674434299995,5.15677716240934,10.2131881726136,15.3051929926614,2.58717367565509,5.78709994585299,11.3497749531055,9.0968096977056,8.22745103010605,3.34911444026059,4.69343416127421,2.96564899209348,4.85162475720916,7.74965388824956,12.5942252822806,9.58975506357678,3.34242563208782,3.93938159388147,1.45740418314925,2.96680483216816,0.683483523191411,10.3193433981611,9.81530995059472,2.63715839806567,0.820165366326151,0.915112692826091,2.20971958992012,1.95932033253121,2.62579950228405,0,9.33191181064349,14.6390016331331,11.1245501046455,7.73626695253534,8.07941485860857,11.5983337890946,9.83576123131498,2.6175594198403,2.33306951925227,3.10669656543463,4.50954350947352,10.4661582230785,7.44563207056939,13.2226808073952,8.65370817300798,14.6991829176977,19.0118726606121,14.4526867176785,13.9462928086195,16.6693043369944,8.64090018773596,0.316011120628178,2.8381530140623,4.10843828659309,1.68897069871134,1.9692936523423,2.18549490259391,1.08175904567972,1.62458479892035,0.807731599585181,0.838274873204998,1.10908803650525,0.779663045918019,0.481059208201647,0.467507608726276,3.40095575422817,7.5475224147182,5.02397597013064,4.19711540910196,5.02292944483695,4.31669693537719,6.59345847362154,4.50173596066038,2.50786052017682,0.564751842617067,0.460325236507177,0.572895513439397,1.3748254587495,1.37016503954128,0,0,0.45032120322422,1.35942722695261,1.03552062350364,5.91587881229807,11.5717213286299,8.70741389346084,8.75184181445858,5.24032906569956,3.8607136774503,11.7790765734856,11.5379632053781,8.98573786857083,13.1402550117175,7.35089969681695,13.2038438970253,14.5144336578318,12.9971059381885,13.1527223908354,12.3836359733599,11.9360855723201,14.6611007552416,11.9504911232959,11.9231125308862,7.88599280486455,11.5359274003569,13.8292990169446,12.4997918303803,12.234219453993,12.4383473600764,13.5366699925852,11.3119975918272,14.6668442953531,7.2948495315506,11.7448667942932,10.4414751318097,9.00308294973317,10.0708946770878,10.4169569929816,5.24602213669686,7.01794825336225,9.23945532407683,10.7121465958552,6.61774257358547,7.65163857547391|short_description=p1@Ccdc46}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:76380
|HGNC=
|MCL_coexpression_id=417
|TSSclassifier=NA
|UniProt=uniprot:Q5PR68,uniprot:Q3TV83
|association_with_transcript=0bp_to_ENSMUST00000061287,ENSMUST00000100297,ENSMUST00000149683,NM_029606,uc007mbq.1,uc007mbr.1_5end
|cluster_id=chr11:108286556..108286618,+
|description=CAGE_peak_1_at_Ccdc46_5end
|id=chr11:108286556..108286618,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!1.31e-10!333;UBERON:0000922!3.22e-08!328;UBERON:0000464!8.32e-08!57;UBERON:0005157!6.92e-07!27
|ontology_enrichment_uberon_v019_2=
|phase1_expression=7.8472935081349,0,0,0.30246421130683,0,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0.999329285446988,0.202475267389826,0,0.157731082679119,0,0.42438965179803,4.93251082876205,0.198581902401771,0,0.47997726838022,0.45881856213434,0,0,0.430942465371778,0.190023419456374,0.504060259519861,0.665191531965914,0,0,0,2.59966457776147,1.82858109894342,2.6542016314108,0,0.7813353445238,0.523523743973798,0,0,0,4.15459499319405,2.53442328048786,2.20256102594018,1.56478268869608,0.872100625521786,1.09843091367236,0.972149495371417,1.25987779462826,0,0,0,0,2.05807548828758,3.15186783932632,2.06268836910977,1.01158230429799,1.05798195854407,0,2.03306719241479,0,0.899899717281399,0,0.7104801149461,1.19840044207362,0.768436610643109,3.21437798156281,1.4850653216486,2.10324961351382,0.856952953211411,0.883474163806454,2.57230678351403,1.62937300731002,1.83843757322004,1.10115880999389,0.893811366596314,1.0752457327937,0.263772575460388,0.640413505216868,1.04182674111352,0.279182999001381,1.12552522006336,1.22238598221448,2.06240009831567,2.42031857358475,1.1183966749518,0.681535739998656,4.60986516651392,10.4351215932604,0.860423876981386,0,0.539703191637817,0,1.34408066129201,0.983110940922263,1.87473354835864,2.33807404142582,1.06001872353102,5.49289337129054,2.56652954828636,7.64415719119937,0,0.649473123033642,2.28023878927589,1.01104889002957,2.05530983494308,2.84831672011889,8.16431764856536,7.45986905094384,3.65358573974569,6.22661842591358,9.04335843315735,15.6392980490487,6.03199638382442,2.96633961281249,4.916378135277,2.65383165584962,12.2942805960031,2.65009822152472,3.87900202508178,1.86391761218122,0.292780797011547,1.25668024088073,1.27728527604296,0.599075622529601,0.599902730993408,0.381210681219194,1.49790639404823,2.28750301409313,2.51308704225729,2.25971616249959,2.30143911597297,2.0778804455956,2.43361894601636,19.8586759508117,3.98102305952298,4.80173241023982,2.10441855886474,15.0939713836736,7.58676944630461,14.7650946440386,18.9888070473001,24.1529571987214,22.5480147701336,15.9292931751539,7.76110112217047,3.66465587985832,15.5066985737612,15.6596500505914,7.89104636739269,16.9608822027615,16.716103993064,18.7261744131229,16.1217756122979,0,0.257347907114715,0.284163499395593,10.1491628542396,10.3191466391682,9.36322719597277,9.94327889457883,11.4123254413494,13.2669717083145,9.99895962426754,7.77992864058896,13.5447797145917,11.1900697941167,6.56669856316381,5.35054143002648,5.99419948443863,5.26920276698522,6.57611451925822,1.47202963994889,5.14523061896422,0,0.264450566663544,13.8637362847902,16.7210403739516,12.1135413642768,7.86565746031036,7.33847544688072,4.1849637744763,1.42358718463353,2.79988223030818,3.77002813200404,6.36660710531683,5.26403035221624,1.79763881730844,1.51296634912286,1.7922714592893,2.27601481143698,12.9100819248994,13.5249282807697,13.4409876377907,9.89157684554891,15.4298803758701,12.7737804991,6.9376769550413,5.65195420228949,4.56569506510662,0.296452627087149,3.67059232575407,3.14494392181125,3.14806957338795,2.23146133527353,2.41177159752417,2.03700681425136,2.30156909960649,6.16113861745134,1.64736847912849,15.814502718009,5.95425516269605,5.30464044294753,3.53610429125956,2.33216637578486,1.92977408545347,4.98833613449833,11.7484675297701,19.3928321966011,15.9560380628677,19.2446003596572,17.0856382590652,13.8065311713888,7.80534591431195,19.0738524368491,15.2810635857655,17.0616602463511,7.37384916220821,7.9435091658312,10.4147322178688,1.50791283939272,0.54390568381871,3.93411418415229,6.62248191131358,2.24770825982909,1.52375192569864,3.27869890753351,6.05930225290495,5.36363973007636,7.80877488593277,9.90947629570875,7.88597033243422,9.80314165962534,12.1722908239198,7.69140333182299,3.21481443702443,8.69633111482352,1.28528526568723,7.94864477166304,11.0400674273698,19.3835481630756,9.56826713240706,3.98235415019888,6.31229654002952,5.44182402536552,6.78978287121233,2.06711325016541,7.37844355065426,10.3371317267288,11.9966130727577,11.0514187299264,5.37262488490887,4.21674434299995,5.15677716240934,10.2131881726136,15.3051929926614,2.58717367565509,5.78709994585299,11.3497749531055,9.0968096977056,8.22745103010605,3.34911444026059,4.69343416127421,2.96564899209348,4.85162475720916,7.74965388824956,12.5942252822806,9.58975506357678,3.34242563208782,3.93938159388147,1.45740418314925,2.96680483216816,0.683483523191411,10.3193433981611,9.81530995059472,2.63715839806567,0.820165366326151,0.915112692826091,2.20971958992012,1.95932033253121,2.62579950228405,0,9.33191181064349,14.6390016331331,11.1245501046455,7.73626695253534,8.07941485860857,11.5983337890946,9.83576123131498,2.6175594198403,2.33306951925227,3.10669656543463,4.50954350947352,10.4661582230785,7.44563207056939,13.2226808073952,8.65370817300798,14.6991829176977,19.0118726606121,14.4526867176785,13.9462928086195,16.6693043369944,8.64090018773596,0.316011120628178,2.8381530140623,4.10843828659309,1.68897069871134,1.9692936523423,2.18549490259391,1.08175904567972,1.62458479892035,0.807731599585181,0.838274873204998,1.10908803650525,0.779663045918019,0.481059208201647,0.467507608726276,3.40095575422817,7.5475224147182,5.02397597013064,4.19711540910196,5.02292944483695,4.31669693537719,6.59345847362154,4.50173596066038,2.50786052017682,0.564751842617067,0.460325236507177,0.572895513439397,1.3748254587495,1.37016503954128,0,0,0.45032120322422,1.35942722695261,1.03552062350364,5.91587881229807,11.5717213286299,8.70741389346084,8.75184181445858,5.24032906569956,3.8607136774503,11.7790765734856,11.5379632053781,8.98573786857083,13.1402550117175,7.35089969681695,13.2038438970253,14.5144336578318,12.9971059381885,13.1527223908354,12.3836359733599,11.9360855723201,14.6611007552416,11.9504911232959,11.9231125308862,7.88599280486455,11.5359274003569,13.8292990169446,12.4997918303803,12.234219453993,12.4383473600764,13.5366699925852,11.3119975918272,14.6668442953531,7.2948495315506,11.7448667942932,10.4414751318097,9.00308294973317,10.0708946770878,10.4169569929816,5.24602213669686,7.01794825336225,9.23945532407683,10.7121465958552,6.61774257358547,7.65163857547391
|short_description=p1@Ccdc46
}}

Revision as of 08:45, 5 August 2015

Short description:p1@Ccdc46
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccdc46_5end
Coexpression cluster:MCL_coexpression_mm9:417
Association with transcript: 0bp_to_ENSMUST00000061287, ENSMUST00000100297, ENSMUST00000149683, NM_029606, uc007mbq.1, uc007mbr.1_5end
EntrezGene:76380
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ccdc46

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F94.61
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D78.16
adrenal gland, embryo E14.CNhs11038.406-44C57.46
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F59.04
adrenal gland, neonate N00.CNhs11191.1311-23C115.64
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H14.92
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F512.29
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.86
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C615.09
eyeball, embryo E14.CNhs10521.399-16E27.59
eyeball, embryo E15.CNhs10593.426-16C914.77
eyeball, embryo E17.CNhs11023.1261-18D418.99
eyeball, neonate N00.CNhs11207.633-15C624.15
eyeball, neonate N01.CNhs11140.1532-43E722.55
eyeball, neonate N02.CNhs11205.1551-44G815.93
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H215.51
forelimb, embryo E13.CNhs10589.384-1E215.66
forelimb, embryo E14.CNhs10577.413-26A87.89
forelimb, embryo E15.CNhs11007.437-20E716.96
forelimb, embryo E17.CNhs10598.1517-43C416.72
forelimb, embryo E18.CNhs11008.1520-43B518.73
gonad, embryo E13.CNhs11044.1564-45I616.12
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E910.15
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I99.36
heart, embryo E14.CNhs10597.403-26D49.94
heart, embryo E15.CNhs11017.431-16C811.41
heart, embryo E16.CNhs11021.457-17C613.27
heart, embryo E17.CNhs11025.479-18E510.00
heart, embryo E18.CNhs11030.1283-20G37.78
heart, neonate N00.CNhs11213.639-21E313.54
heart, neonate N03.CNhs11221.1349-25I211.19
heart, neonate N10.CNhs11118.749-24G16.57
heart, neonate N16.CNhs11209.782-15G15.35
heart, neonate N20.CNhs11127.821-26I65.99
heart, neonate N25.CNhs11196.1351-25D35.27
heart, neonate N30.CNhs11202.1390-42D26.58
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G15.15
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I513.86
intestine, embryo E13.CNhs11010.381-16D516.72
intestine, embryo E15.CNhs10602.976-16D812.11
intestine, embryo E16.CNhs10585.463-22H47.87
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F26.37
intestine, neonate N10.CNhs11098.755-23A55.26
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F812.91
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I213.44
kidney, embryo E18.CNhs11001.1288-20C79.89
kidney, neonate N00.CNhs11214.646-21G715.43
kidney, neonate N10.CNhs11206.758-6D512.77
kidney, neonate N20.CNhs11113.832-19I16.94
kidney, neonate N25.CNhs11122.1353-25F35.65
kidney, neonate N30.CNhs11203.1385-42H14.57
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F46.16
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G211.75
lung, embryo E14.CNhs10604.404-26F819.39
lung, embryo E15.CNhs11020.432-17C515.96
lung, embryo E16.CNhs10998.458-17B619.24
lung, embryo E17.CNhs10605.480-44A617.09
lung, embryo E18.CNhs10583.1287-20I613.81
lung, neonate N00.CNhs11224.640-42C67.81
lung, neonate N06.CNhs11212.683-20E519.07
lung, neonate N07.CNhs11111.715-19A315.28
lung, neonate N10.CNhs11219.750-23E617.06
lung, neonate N20.CNhs11109.822-18A47.37
lung, neonate N25.CNhs11119.1359-25C77.94
lung, neonate N30.CNhs11133.1394-42H210.41
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.89
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.17
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I77.95
ovary, embryo E18.CNhs11040.505-44H711.04
ovary, neonate N00.CNhs11217.1299-22I419.38
oviduct, adult pregnant day01.CNhs10500.988-6G69.57
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E56.79
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G910.34
pancreas, neonate N01.CNhs11138.1531-43D712.00
pancreas, neonate N02.CNhs11139.1539-43D811.05
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E615.31
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B911.35
pituitary gland, embryo E16.CNhs11036.449-43F69.10
pituitary gland, embryo E17.CNhs11039.1265-44F58.23
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F84.85
skin, adult.CNhs10492.30-1C37.75
skin, neonate N00.CNhs11124.650-25G412.59
skin, neonate N03.CNhs11215.662-22H39.59
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C110.32
spleen, embryo E18.CNhs11011.1271-21F29.82
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E39.33
stomach, embryo E15.CNhs10603.1252-16G814.64
stomach, embryo E16.CNhs11022.459-17D411.12
stomach, embryo E17.CNhs11006.1035-18D57.74
stomach, embryo E18.CNhs10999.1286-20C68.08
stomach, neonate N03.CNhs11193.1340-24B811.60
stomach, neonate N07.CNhs11210.718-18A99.84
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F510.47
testis, embryo E15.CNhs11034.443-27C57.45
testis, embryo E16.CNhs11033.470-26G513.22
testis, embryo E17.CNhs11029.486-18I58.65
testis, embryo E18.CNhs11027.503-18G514.70
testis, neonate N00.CNhs11189.1300-22B719.01
testis, neonate N07.CNhs11222.726-26I414.45
testis, neonate N10.CNhs11204.763-44D913.95
testis, neonate N20.CNhs11110.839-18H316.67
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I24.11
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.02
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.20
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D54.50
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I85.92
whole body, embryo E12.CNhs10587.857-27C911.57
whole body, embryo E13.CNhs10512.372-23H28.71
whole body, embryo E14.5.CNhs10578.420-27D28.75
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.14
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.51
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.83
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.50
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.44
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.07
whole body, embryo E17.5.CNhs10513.490-9F910.42
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C29.24
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B47.65





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:108286556..108286618,%2B&oldid=3880634"