FFCP PHASE1:Mm9::chr15:59373755..59373758,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr15:59373755..59373758,- to FFCP PHASE1:Mm9::chr15:59373755..59373758,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=751 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:59373755..59373758,- | |||
|description=CAGE_peak_at_chr15:59373755..59373758,- | |||
|id=chr15:59373755..59373758,- | |||
|ontology_enrichment_celltype=CL:0000117!1.63e-71!23;CL:0000337!1.63e-71!23;CL:0000540!4.07e-54!33;CL:0000047!4.07e-54!33;CL:0000031!4.07e-54!33;CL:0000404!4.07e-54!33;CL:0000393!2.28e-45!39;CL:0000211!2.28e-45!39;CL:0002319!6.86e-41!43;CL:0000221!6.75e-40!44;CL:0000133!6.75e-40!44;CL:0000055!9.01e-35!50;CL:0002321!5.17e-24!70;CL:0000220!5.17e-24!70;CL:0000723!8.74e-18!91;CL:0000048!8.74e-18!91;CL:0000034!1.70e-16!97;CL:0002610!2.20e-14!3;CL:0002614!4.02e-14!3;CL:0000548!1.96e-13!115;CL:0000004!1.96e-13!115;CL:0000255!1.96e-13!115;CL:0002612!3.16e-13!3;CL:0002613!3.83e-13!3;CL:0002371!5.17e-13!118;CL:0000144!1.30e-12!121;CL:0000012!1.30e-12!121;CL:0002609!4.06e-11!6;CL:0002611!8.23e-10!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.31e-33,3;CL:0002614,5.97e-33,3;CL:0000117,2.59e-30,23;CL:0000337,2.59e-30,23;CL:0000540,3.59e-21,33;CL:0000047,3.59e-21,33;CL:0000031,3.59e-21,33;CL:0000404,3.59e-21,33;CL:0000393,6.32e-18,39;CL:0000211,6.32e-18,39;CL:0002319,2.91e-16,43;CL:0000221,6.80e-16,44;CL:0000133,6.80e-16,44;CL:0002321,5.63e-10,70;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97;CL:0002611,9.80e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.18e-25!34;UBERON:0001017!6.62e-23!73;UBERON:0005743!6.62e-23!73;UBERON:0000073!3.24e-22!75;UBERON:0001016!3.24e-22!75;UBERON:0001948!2.26e-21!5;UBERON:0002315!2.26e-21!5;UBERON:0002420!4.17e-19!8;UBERON:0007245!4.17e-19!8;UBERON:0010009!4.17e-19!8;UBERON:0010011!4.17e-19!8;UBERON:0000454!4.17e-19!8;UBERON:0002240!8.55e-18!6;UBERON:0005174!8.55e-18!6;UBERON:0001137!8.55e-18!6;UBERON:0001049!6.46e-16!52;UBERON:0005068!6.46e-16!52;UBERON:0006241!6.46e-16!52;UBERON:0007135!6.46e-16!52;UBERON:0004121!1.54e-15!102;UBERON:0000924!1.54e-15!102;UBERON:0006601!1.54e-15!102;UBERON:0004684!2.20e-14!3;UBERON:0002275!2.20e-14!3;UBERON:0002038!4.02e-14!3;UBERON:0002308!4.02e-14!3;UBERON:0009663!4.02e-14!3;UBERON:0009661!4.02e-14!3;UBERON:0006331!4.02e-14!3;UBERON:0000125!4.02e-14!3;UBERON:0002257!3.16e-13!3;UBERON:0002791!4.49e-13!29;UBERON:0003528!4.49e-13!29;UBERON:0001893!4.49e-13!29;UBERON:0002616!1.04e-12!49;UBERON:0000955!2.07e-12!50;UBERON:0006238!2.07e-12!50;UBERON:0002346!5.62e-11!71;UBERON:0003075!5.62e-11!71;UBERON:0007284!5.62e-11!71;UBERON:0002950!1.03e-10!4;UBERON:0001891!1.03e-10!4;UBERON:0009616!1.03e-10!4;UBERON:0002256!8.23e-10!2;UBERON:0000033!2.16e-09!63;UBERON:0002780!2.51e-09!39;UBERON:0001890!2.51e-09!39;UBERON:0006240!2.51e-09!39;UBERON:0003080!4.70e-09!40;UBERON:0003076!8.16e-09!12;UBERON:0003057!8.16e-09!12;UBERON:0000369!4.37e-08!5;UBERON:0002435!4.37e-08!5;UBERON:0000204!4.37e-08!5;UBERON:0010082!4.37e-08!5;UBERON:0002298!2.75e-07!6;UBERON:0003056!4.16e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.31e-33,3;UBERON:0002275,1.31e-33,3;UBERON:0002038,5.97e-33,3;UBERON:0009663,5.97e-33,3;UBERON:0009661,5.97e-33,3;UBERON:0000125,5.97e-33,3;UBERON:0002308,5.97e-33,3;UBERON:0002950,6.19e-25,4;UBERON:0001891,6.19e-25,4;UBERON:0009616,6.19e-25,4;UBERON:0010286,6.19e-25,4;UBERON:0000073,5.97e-13,54;UBERON:0002420,7.42e-13,8;UBERON:0007245,7.42e-13,8;UBERON:0010009,7.42e-13,8;UBERON:0010011,7.42e-13,8;UBERON:0000454,7.42e-13,8;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0002020,3.09e-08,34;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0002256,9.80e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,1.42825492201902,0.883474163806454,0,0.287536413054709,1.83843757322004,1.10115880999389,3.70293280447044,3.37934373163736,0.659431438650969,0.731901148819277,0.52091337055676,1.3959149950069,1.12552522006336,1.68078072554491,0.589257170947335,0.996601765593721,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,1.42825492201902,0.883474163806454,0,0.287536413054709,1.83843757322004,1.10115880999389,3.70293280447044,3.37934373163736,0.659431438650969,0.731901148819277,0.52091337055676,1.3959149950069,1.12552522006336,1.68078072554491,0.589257170947335,0.996601765593721,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:59373755..59373758,- | |||
}} | }} |
Latest revision as of 08:17, 5 August 2015
Short description: | p@chr15:59373755..59373758, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:59373755..59373758, - |
Coexpression cluster: | MCL_coexpression_mm9:751 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.31e-33 | 3 |
neuron of the substantia nigra | 5.97e-33 | 3 |
CNS neuron (sensu Vertebrata) | 2.59e-30 | 23 |
neuroblast (sensu Vertebrata) | 2.59e-30 | 23 |
neuron | 3.59e-21 | 33 |
neuronal stem cell | 3.59e-21 | 33 |
neuroblast | 3.59e-21 | 33 |
electrically signaling cell | 3.59e-21 | 33 |
electrically responsive cell | 6.32e-18 | 39 |
electrically active cell | 6.32e-18 | 39 |
neural cell | 2.91e-16 | 43 |
ectodermal cell | 6.80e-16 | 44 |
neurectodermal cell | 6.80e-16 | 44 |
embryonic cell | 5.63e-10 | 70 |
somatic stem cell | 1.22e-07 | 91 |
multi fate stem cell | 1.22e-07 | 91 |
stem cell | 3.71e-07 | 97 |
neuron of the dorsal spinal cord | 9.80e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.31e-33 | 3 |
reticular formation | 1.31e-33 | 3 |
substantia nigra | 5.97e-33 | 3 |
telencephalic nucleus | 5.97e-33 | 3 |
midbrain nucleus | 5.97e-33 | 3 |
neural nucleus | 5.97e-33 | 3 |
nucleus of brain | 5.97e-33 | 3 |
regional part of midbrain | 6.19e-25 | 4 |
midbrain | 6.19e-25 | 4 |
presumptive midbrain | 6.19e-25 | 4 |
midbrain neural tube | 6.19e-25 | 4 |
regional part of nervous system | 5.97e-13 | 54 |
basal ganglion | 7.42e-13 | 8 |
nuclear complex of neuraxis | 7.42e-13 | 8 |
aggregate regional part of brain | 7.42e-13 | 8 |
collection of basal ganglia | 7.42e-13 | 8 |
cerebral subcortex | 7.42e-13 | 8 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
gray matter | 3.09e-08 | 34 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
dorsal horn of spinal cord | 9.80e-07 | 2 |