FFCP PHASE1:Mm9::chr4:155265934..155266001,+: Difference between revisions
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{{FFCP|EntrezGene=140500|HGNC=|MCL_coexpression_id=1|UniProt=A2ADA6,Q6NXL5|association_with_transcript=0bp_to_ENSMUST00000079031,ENSMUST00000105584,NM_207223,uc008wfj.1_5end|description=CAGE_peak_2_at_Acap3_5end|id=chr4:155265934..155266001,+|ontology_enrichment_celltype=CL:0002319!3.75e-14!43;CL:0000221!5.44e-14!44;CL:0000133!5.44e-14!44;CL:0000055!4.00e-12!50;CL:0000540!5.08e-10!33;CL:0000047!5.08e-10!33;CL:0000031!5.08e-10!33;CL:0000404!5.08e-10!33;CL:0000117!5.66e-09!23;CL:0000337!5.66e-09!23;CL:0000393!7.39e-09!39;CL:0000211!7.39e-09!39;CL:0002321!2.41e-08!70;CL:0000220!2.41e-08!70|ontology_enrichment_celltype_v019_2=CL:0002319,3.72e-14,43;CL:0000221,5.40e-14,44;CL:0000133,5.40e-14,44;CL:0000540,5.05e-10,33;CL:0000047,5.05e-10,33;CL:0000031,5.05e-10,33;CL:0000404,5.05e-10,33;CL:0000117,5.63e-09,23;CL:0000337,5.63e-09,23;CL:0000393,7.36e-09,39;CL:0000211,7.36e-09,39;CL:0002321,2.32e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.85e-27!75;UBERON:0001016!3.85e-27!75;UBERON:0001017!8.28e-27!73;UBERON:0005743!8.28e-27!73;UBERON:0004121!3.59e-22!102;UBERON:0000924!3.59e-22!102;UBERON:0006601!3.59e-22!102;UBERON:0001049!6.42e-19!52;UBERON:0005068!6.42e-19!52;UBERON:0006241!6.42e-19!52;UBERON:0007135!6.42e-19!52;UBERON:0000955!4.78e-18!50;UBERON:0006238!4.78e-18!50;UBERON:0002616!1.84e-17!49;UBERON:0002020!7.66e-16!34;UBERON:0002346!8.53e-16!71;UBERON:0003075!8.53e-16!71;UBERON:0007284!8.53e-16!71;UBERON:0000033!8.27e-15!63;UBERON:0002791!3.03e-13!29;UBERON:0003528!3.03e-13!29;UBERON:0001893!3.03e-13!29;UBERON:0003080!8.68e-13!40;UBERON:0002780!1.92e-12!39;UBERON:0001890!1.92e-12!39;UBERON:0006240!1.92e-12!39;UBERON:0002619!1.14e-10!17;UBERON:0003056!1.76e-10!49;UBERON:0000956!3.71e-10!21;UBERON:0001869!3.71e-10!21;UBERON:0000203!3.71e-10!21;UBERON:0007811!9.88e-09!86;UBERON:0002021!4.41e-08!10;UBERON:0000411!4.41e-08!10;UBERON:0001950!4.41e-08!10;UBERON:0003076!3.89e-07!12;UBERON:0003057!3.89e-07!12;UBERON:0000153!8.78e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.79e-27,75;UBERON:0001017,8.16e-27,73;UBERON:0004121,1.32e-22,95;UBERON:0000924,1.32e-22,95;UBERON:0006601,1.32e-22,95;UBERON:0000073,3.47e-20,54;UBERON:0001049,6.35e-19,52;UBERON:0005068,6.35e-19,52;UBERON:0006241,6.35e-19,52;UBERON:0007135,6.35e-19,52;UBERON:0002346,1.85e-16,64;UBERON:0003075,1.85e-16,64;UBERON:0007284,1.85e-16,64;UBERON:0010314,1.96e-16,92;UBERON:0000955,1.98e-16,47;UBERON:0006238,1.98e-16,47;UBERON:0002616,7.41e-16,46;UBERON:0002020,7.59e-16,34;UBERON:0010371,6.60e-15,73;UBERON:0003528,3.01e-13,29;UBERON:0002791,3.01e-13,29;UBERON:0001893,3.01e-13,29;UBERON:0003080,8.62e-13,40;UBERON:0002780,1.90e-12,39;UBERON:0001890,1.90e-12,39;UBERON:0006240,1.90e-12,39;UBERON:0002619,1.14e-10,17;UBERON:0003056,1.75e-10,49;UBERON:0000956,3.69e-10,21;UBERON:0001869,3.69e-10,21;UBERON:0000203,3.69e-10,21;UBERON:0002021,4.39e-08,10;UBERON:0000411,4.39e-08,10;UBERON:0001950,4.39e-08,10;UBERON:0003076,3.88e-07,12;UBERON:0003057,3.88e-07,12|phase1_expression=2.7225304007815,7.67745896806594,7.27998783023258,7.56160528267075,14.0250804384977,3.02182689441402,3.27057696833736,1.54947988129892,1.12630977721333,2.57470978954193,1.02730780935303,0.398860794976682,2.05440875917447,2.97229368224591,1.99865857089398,2.83465374345756,3.49780939064073,2.99689057090326,1.50825876966313,1.69755860719212,4.42225108785563,3.57447424323187,3.13439746966722,3.83981814704176,3.89995777814189,5.7423196411502,6.03066794622705,3.878482188346,1.90023419456374,4.28451220591882,2.66076612786366,5.71527606113668,9.84103660135312,0,0.577703239502549,0.166234645358492,0.204169356262369,3.76678467663217,5.4693474116666,4.18818995179039,1.76469446409304,4.78131839470912,4.36959317728038,2.26614272356039,1.72340783073175,1.28482726513177,17.9950009200049,5.23260375313072,10.1055644057857,9.91592485278845,7.41928034614421,7.18762821824858,1.8456086666351,3.62681071005672,2.68875039313971,5.40244815675489,4.58453503902011,6.70373719960675,10.9250888864183,7.93486468908049,11.4089652631112,6.43804610931351,11.5608323494448,3.5995988691256,2.96659908770092,4.2628806896766,9.28760342607055,11.1423308543251,3.00699875694585,4.59020190327748,2.52389953621658,11.9973413449598,9.27647871996777,5.38959516545798,4.12135525378416,8.27296907949019,11.0115880999389,9.3211756802187,7.37311359629969,8.44072241473241,7.41049913179518,6.25096044668112,6.70039197603314,6.19038871034848,5.95913166329559,8.54422897873636,6.54909731675874,9.87917062874093,3.86203585999239,5.2144376473682,5.2175607966302,1.72084775396277,0.679971333707751,0,1.94932925234301,2.24013443548668,1.82577746171277,4.77204903218562,2.33807404142582,4.24007489412408,3.38024207464033,2.56652954828636,10.1922095882658,7.11066703153331,0.649473123033642,1.26679932737549,1.01104889002957,1.48439043634778,0.776813650941515,3.11728492036132,2.08182392119363,4.26251669636998,5.30415643688935,3.16517545160507,3.99801604261396,2.63899841792318,2.471949677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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:140500 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2ADA6,uniprot:Q6NXL5 | |||
|association_with_transcript=0bp_to_ENSMUST00000079031,ENSMUST00000105584,NM_207223,uc008wfj.1_5end | |||
|cluster_id=chr4:155265934..155266001,+ | |||
|description=CAGE_peak_2_at_Acap3_5end | |||
|id=chr4:155265934..155266001,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.75e-14!43;CL:0000221!5.44e-14!44;CL:0000133!5.44e-14!44;CL:0000055!4.00e-12!50;CL:0000540!5.08e-10!33;CL:0000047!5.08e-10!33;CL:0000031!5.08e-10!33;CL:0000404!5.08e-10!33;CL:0000117!5.66e-09!23;CL:0000337!5.66e-09!23;CL:0000393!7.39e-09!39;CL:0000211!7.39e-09!39;CL:0002321!2.41e-08!70;CL:0000220!2.41e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.72e-14,43;CL:0000221,5.40e-14,44;CL:0000133,5.40e-14,44;CL:0000540,5.05e-10,33;CL:0000047,5.05e-10,33;CL:0000031,5.05e-10,33;CL:0000404,5.05e-10,33;CL:0000117,5.63e-09,23;CL:0000337,5.63e-09,23;CL:0000393,7.36e-09,39;CL:0000211,7.36e-09,39;CL:0002321,2.32e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.85e-27!75;UBERON:0001016!3.85e-27!75;UBERON:0001017!8.28e-27!73;UBERON:0005743!8.28e-27!73;UBERON:0004121!3.59e-22!102;UBERON:0000924!3.59e-22!102;UBERON:0006601!3.59e-22!102;UBERON:0001049!6.42e-19!52;UBERON:0005068!6.42e-19!52;UBERON:0006241!6.42e-19!52;UBERON:0007135!6.42e-19!52;UBERON:0000955!4.78e-18!50;UBERON:0006238!4.78e-18!50;UBERON:0002616!1.84e-17!49;UBERON:0002020!7.66e-16!34;UBERON:0002346!8.53e-16!71;UBERON:0003075!8.53e-16!71;UBERON:0007284!8.53e-16!71;UBERON:0000033!8.27e-15!63;UBERON:0002791!3.03e-13!29;UBERON:0003528!3.03e-13!29;UBERON:0001893!3.03e-13!29;UBERON:0003080!8.68e-13!40;UBERON:0002780!1.92e-12!39;UBERON:0001890!1.92e-12!39;UBERON:0006240!1.92e-12!39;UBERON:0002619!1.14e-10!17;UBERON:0003056!1.76e-10!49;UBERON:0000956!3.71e-10!21;UBERON:0001869!3.71e-10!21;UBERON:0000203!3.71e-10!21;UBERON:0007811!9.88e-09!86;UBERON:0002021!4.41e-08!10;UBERON:0000411!4.41e-08!10;UBERON:0001950!4.41e-08!10;UBERON:0003076!3.89e-07!12;UBERON:0003057!3.89e-07!12;UBERON:0000153!8.78e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.79e-27,75;UBERON:0001017,8.16e-27,73;UBERON:0004121,1.32e-22,95;UBERON:0000924,1.32e-22,95;UBERON:0006601,1.32e-22,95;UBERON:0000073,3.47e-20,54;UBERON:0001049,6.35e-19,52;UBERON:0005068,6.35e-19,52;UBERON:0006241,6.35e-19,52;UBERON:0007135,6.35e-19,52;UBERON:0002346,1.85e-16,64;UBERON:0003075,1.85e-16,64;UBERON:0007284,1.85e-16,64;UBERON:0010314,1.96e-16,92;UBERON:0000955,1.98e-16,47;UBERON:0006238,1.98e-16,47;UBERON:0002616,7.41e-16,46;UBERON:0002020,7.59e-16,34;UBERON:0010371,6.60e-15,73;UBERON:0003528,3.01e-13,29;UBERON:0002791,3.01e-13,29;UBERON:0001893,3.01e-13,29;UBERON:0003080,8.62e-13,40;UBERON:0002780,1.90e-12,39;UBERON:0001890,1.90e-12,39;UBERON:0006240,1.90e-12,39;UBERON:0002619,1.14e-10,17;UBERON:0003056,1.75e-10,49;UBERON:0000956,3.69e-10,21;UBERON:0001869,3.69e-10,21;UBERON:0000203,3.69e-10,21;UBERON:0002021,4.39e-08,10;UBERON:0000411,4.39e-08,10;UBERON:0001950,4.39e-08,10;UBERON:0003076,3.88e-07,12;UBERON:0003057,3.88e-07,12 | |||
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| |||
|short_description=p2@Acap3 | |||
}} |
Revision as of 07:39, 5 August 2015
Short description: | p2@Acap3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Acap3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000079031, ENSMUST00000105584, NM_207223, uc008wfj.1_5end |
EntrezGene: | 140500 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.72e-14 | 43 |
ectodermal cell | 5.40e-14 | 44 |
neurectodermal cell | 5.40e-14 | 44 |
neuron | 5.05e-10 | 33 |
neuronal stem cell | 5.05e-10 | 33 |
neuroblast | 5.05e-10 | 33 |
electrically signaling cell | 5.05e-10 | 33 |
CNS neuron (sensu Vertebrata) | 5.63e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.63e-09 | 23 |
electrically responsive cell | 7.36e-09 | 39 |
electrically active cell | 7.36e-09 | 39 |
embryonic cell | 2.32e-08 | 70 |