FFCP PHASE1:Mm9::chr12:77810942..77810982,-: Difference between revisions
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{{FFCP|EntrezGene=20741|HGNC=|MCL_coexpression_id=15|UniProt=E9Q397|association_with_transcript=27bp_to_ENSMUST00000166101_5end|description=CAGE_peak_4_at_Spnb1_5end|id=chr12:77810942..77810982,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!4.87e-07!18;UBERON:0000948!4.87e-07!18;UBERON:0005498!4.87e-07!18;UBERON:0004140!4.87e-07!18;UBERON:0009881!4.87e-07!18;UBERON:0004141!4.87e-07!18;UBERON:0003084!4.87e-07!18;UBERON:0007005!4.87e-07!18;UBERON:0004139!4.87e-07!18;UBERON:0004291!4.87e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.29e-08,18;UBERON:0000948,1.29e-08,18;UBERON:0005498,1.29e-08,18;UBERON:0004140,1.29e-08,18;UBERON:0009881,1.29e-08,18;UBERON:0004141,1.29e-08,18;UBERON:0003084,1.29e-08,18;UBERON:0007005,1.29e-08,18;UBERON:0004139,1.29e-08,18;UBERON:0004291,1.29e-08,18;UBERON:0004872,4.60e-08,33|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.281577444303333,0,0,0,0,0,21.9852442798337,20.8549525411521,41.9737126876888,0,0.274228867211478,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,8.25539875497521,4.30545351309199,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,2.06268836910977,0.404632921719196,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,1.14260393761521,1.10434270475807,0,0,0,2.20231761998777,2.17068474744819,1.99688493233117,0.131886287730194,0.0914876436024097,0,2.51264699101243,0.56276261003168,0.916789486660861,1.17851434189467,0.996601765593721,0.745597783301202,0,0,0,0,0,0,0,0,12.4995533917259,0,0,0,0.14084341977668,0,0,0,0,0,0,3.19714863213368,0,0.148442139064825,1.90833859442749,2.43572382649713,1.61430848079241,0.753613202763113,2.4693628498498,0.376999773989026,0,0.578397427679647,26.5383165584962,18.6031877439521,26.2801406967868,14.5462575940567,0,10.8328894894272,20.5257772677186,0.255457055208591,0,0,0,1.64769703345305,2.28750301409313,0.502617408451458,1.21677024134594,1.79000820131231,1.45451631191692,0.811206315338788,0.101839363850316,12.4406970610093,0,2.73574412652416,0.520481771850815,0.459804208866946,1.44049703844279,1.35634336052144,1.83698547708585,2.562274405697,1.87403449119458,4.13925393182425,0,0.189106080167819,0.175951124163949,0.219195732427575,0,3.1342694986995,1.23469281844766,0,0,0,0,4.14251545071004,2.34526059981096,2.34080679899319,3.31442629819294,5.3126342571799,6.78775296704464,7.44108623201305,9.65784245038629,9.5747580741079,14.9749463421267,13.2975645904067,25.7798814355821,22.3685980760758,15.5880581856646,23.6203297018254,0.420579897128254,0,0,0,0.213288250535234,0.696710015581316,0.644337306610467,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,0,0.216138049874694,0,0.379335801906163,0.913988100877831,0,0,0,0.350679099451593,0.252946148497029,0.147610147979602,0,0.123397163921801,0,17.5187361001899,20.2455764966599,23.3856596880248,33.471920029103,28.4589048507852,15.2775511068852,17.2617682470486,19.9426328933294,7.13859674289012,0,0.372140947668503,0.312037673114561,0.505157755894224,0,0,0.369506380333209,0.947457058852424,0,0.169745085775188,0,0.837531287209079,0.476087281772027,0.390267295715598,0.788175720530955,0.221464689648775,0.318909537314974,1.14704320301017,1.03610989119537,0.723245292907558,0,0,0,0.827810238914197,2.88991061978026,1.87538698547525,0,36.1033425902253,0.94652465824877,0,0.430846795465598,0,0,0,0.404810701674894,0.876767573733936,1.58115111178609,0.963963949265421,0.141940085208269,0.712262414669021,1.30309567482861,0,0,0.242780636154981,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0,2.49548164869305,0.316036757935816,1.05418608574999,1.03135543248187,0,0.540183282093931,0.258717367565509,0,0,0,0.658196082408484,0.304464949114599,0.23467170806371,0,0.882113592219848,3.95727007059552,3.87514624070173,1.74907482291652,1.43246812803764,0.492422699235184,0,3.15223013417866,24.2636650732951,1.44470807574256,9.4449208958553,33.7179538038397,38.9578549004922,25.394377225924,0,0.139951452323658,0.138199973804424,0,0.474503990371703,1.01659733563424,0.216010681643603,0.627264888043406,0,0.809186078308924,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0.299033092087958,0.992750942742586,0.972255941720238,0.904118764344118,0.506868376472335,2.11243029562357,1.17183946359555,2.51662426621706,0.724752362478018,3.16833006883652,0,0.202725215290164,0.205421914329655,0.51968329191118,0.358053391334963,1.19208812868759,0.240390899039938,0,0,0,0,0.194915761479505,0,0,19.9522737581386,0,0,0,0.965947970160952,0,0.183151624267265,0.214368379079066,3.00943262421218,1.12950368523413,0,0.572895513439397,0.171853182343688,1.37016503954128,0.755393897389701,2.70009000092722,0.900642406448441,2.26571204492102,0,0.415149390336707,2.39414924040619,2.56100408631201,3.8897074730927,3.14419743941973,2.20612210140017,4.66718128383392,3.7086310303001,5.13470735346904,5.05394423527595,6.59046179714623,3.01802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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20741 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q397 | |||
|association_with_transcript=27bp_to_ENSMUST00000166101_5end | |||
|cluster_id=chr12:77810942..77810982,- | |||
|description=CAGE_peak_4_at_Spnb1_5end | |||
|id=chr12:77810942..77810982,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.87e-07!18;UBERON:0000948!4.87e-07!18;UBERON:0005498!4.87e-07!18;UBERON:0004140!4.87e-07!18;UBERON:0009881!4.87e-07!18;UBERON:0004141!4.87e-07!18;UBERON:0003084!4.87e-07!18;UBERON:0007005!4.87e-07!18;UBERON:0004139!4.87e-07!18;UBERON:0004291!4.87e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.29e-08,18;UBERON:0000948,1.29e-08,18;UBERON:0005498,1.29e-08,18;UBERON:0004140,1.29e-08,18;UBERON:0009881,1.29e-08,18;UBERON:0004141,1.29e-08,18;UBERON:0003084,1.29e-08,18;UBERON:0007005,1.29e-08,18;UBERON:0004139,1.29e-08,18;UBERON:0004291,1.29e-08,18;UBERON:0004872,4.60e-08,33 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.281577444303333,0,0,0,0,0,21.9852442798337,20.8549525411521,41.9737126876888,0,0.274228867211478,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,8.25539875497521,4.30545351309199,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,2.06268836910977,0.404632921719196,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,1.14260393761521,1.10434270475807,0,0,0,2.20231761998777,2.17068474744819,1.99688493233117,0.131886287730194,0.0914876436024097,0,2.51264699101243,0.56276261003168,0.916789486660861,1.17851434189467,0.996601765593721,0.745597783301202,0,0,0,0,0,0,0,0,12.4995533917259,0,0,0,0.14084341977668,0,0,0,0,0,0,3.19714863213368,0,0.148442139064825,1.90833859442749,2.43572382649713,1.61430848079241,0.753613202763113,2.4693628498498,0.376999773989026,0,0.578397427679647,26.5383165584962,18.6031877439521,26.2801406967868,14.5462575940567,0,10.8328894894272,20.5257772677186,0.255457055208591,0,0,0,1.64769703345305,2.28750301409313,0.502617408451458,1.21677024134594,1.79000820131231,1.45451631191692,0.811206315338788,0.101839363850316,12.4406970610093,0,2.73574412652416,0.520481771850815,0.459804208866946,1.44049703844279,1.35634336052144,1.83698547708585,2.562274405697,1.87403449119458,4.13925393182425,0,0.189106080167819,0.175951124163949,0.219195732427575,0,3.1342694986995,1.23469281844766,0,0,0,0,4.14251545071004,2.34526059981096,2.34080679899319,3.31442629819294,5.3126342571799,6.78775296704464,7.44108623201305,9.65784245038629,9.5747580741079,14.9749463421267,13.2975645904067,25.7798814355821,22.3685980760758,15.5880581856646,23.6203297018254,0.420579897128254,0,0,0,0.213288250535234,0.696710015581316,0.644337306610467,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,0,0.216138049874694,0,0.379335801906163,0.913988100877831,0,0,0,0.350679099451593,0.252946148497029,0.147610147979602,0,0.123397163921801,0,17.5187361001899,20.2455764966599,23.3856596880248,33.471920029103,28.4589048507852,15.2775511068852,17.2617682470486,19.9426328933294,7.13859674289012,0,0.372140947668503,0.312037673114561,0.505157755894224,0,0,0.369506380333209,0.947457058852424,0,0.169745085775188,0,0.837531287209079,0.476087281772027,0.390267295715598,0.788175720530955,0.221464689648775,0.318909537314974,1.14704320301017,1.03610989119537,0.723245292907558,0,0,0,0.827810238914197,2.88991061978026,1.87538698547525,0,36.1033425902253,0.94652465824877,0,0.430846795465598,0,0,0,0.404810701674894,0.876767573733936,1.58115111178609,0.963963949265421,0.141940085208269,0.712262414669021,1.30309567482861,0,0,0.242780636154981,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0,2.49548164869305,0.316036757935816,1.05418608574999,1.03135543248187,0,0.540183282093931,0.258717367565509,0,0,0,0.658196082408484,0.304464949114599,0.23467170806371,0,0.882113592219848,3.95727007059552,3.87514624070173,1.74907482291652,1.43246812803764,0.492422699235184,0,3.15223013417866,24.2636650732951,1.44470807574256,9.4449208958553,33.7179538038397,38.9578549004922,25.394377225924,0,0.139951452323658,0.138199973804424,0,0.474503990371703,1.01659733563424,0.216010681643603,0.627264888043406,0,0.809186078308924,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0.299033092087958,0.992750942742586,0.972255941720238,0.904118764344118,0.506868376472335,2.11243029562357,1.17183946359555,2.51662426621706,0.724752362478018,3.16833006883652,0,0.202725215290164,0.205421914329655,0.51968329191118,0.358053391334963,1.19208812868759,0.240390899039938,0,0,0,0,0.194915761479505,0,0,19.9522737581386,0,0,0,0.965947970160952,0,0.183151624267265,0.214368379079066,3.00943262421218,1.12950368523413,0,0.572895513439397,0.171853182343688,1.37016503954128,0.755393897389701,2.70009000092722,0.900642406448441,2.26571204492102,0,0.415149390336707,2.39414924040619,2.56100408631201,3.8897074730927,3.14419743941973,2.20612210140017,4.66718128383392,3.7086310303001,5.13470735346904,5.05394423527595,6.59046179714623,3.01802146217722,4.68207537349412,4.67383612555546,6.43277252302869,4.28664322154766,6.02598494913249,3.27945674788299,4.53294490883637,4.56316652416632,5.48590803816665,4.61437096014278,4.05341522910446,4.94177816549917,4.51725025993587,5.66917872874233,5.3049112133104,6.05060336307039,6.11118512306378,4.48913817326191,7.3553711236988,6.69830480153832,4.09231043169689,3.71848418846318,6.17301155139652,1.99848462350357,5.14649538579898,6.01638951335235,13.5814715768879,10.8089795368563,12.2889952878823 | |||
|short_description=p4@Spnb1 | |||
}} |
Revision as of 06:29, 5 August 2015
Short description: | p4@Spnb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Spnb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 27bp_to_ENSMUST00000166101_5end |
EntrezGene: | 20741 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.29e-08 | 18 |
heart | 1.29e-08 | 18 |
primitive heart tube | 1.29e-08 | 18 |
primary heart field | 1.29e-08 | 18 |
anterior lateral plate mesoderm | 1.29e-08 | 18 |
heart tube | 1.29e-08 | 18 |
heart primordium | 1.29e-08 | 18 |
cardiac mesoderm | 1.29e-08 | 18 |
cardiogenic plate | 1.29e-08 | 18 |
heart rudiment | 1.29e-08 | 18 |
splanchnic layer of lateral plate mesoderm | 4.60e-08 | 33 |