FFCP PHASE1:Mm9::chr9:4796034..4796066,-: Difference between revisions
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{{FFCP|EntrezGene=14802|HGNC=|MCL_coexpression_id=281|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069|association_with_transcript=167bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end|description=CAGE_peak_5_at_Gria4_5end|id=chr9:4796034..4796066,-|ontology_enrichment_celltype=CL:0000540!6.96e-17!33;CL:0000047!6.96e-17!33;CL:0000031!6.96e-17!33;CL:0000404!6.96e-17!33;CL:0000393!1.09e-16!39;CL:0000211!1.09e-16!39;CL:0000221!3.66e-11!44;CL:0000133!3.66e-11!44;CL:0002319!1.03e-10!43;CL:0000055!1.54e-10!50;CL:0000117!6.52e-10!23;CL:0000337!6.52e-10!23;CL:0000107!3.73e-08!9|ontology_enrichment_celltype_v019_2=CL:0000540,1.06e-22,33;CL:0000047,1.06e-22,33;CL:0000031,1.06e-22,33;CL:0000404,1.06e-22,33;CL:0000393,7.50e-22,39;CL:0000211,7.50e-22,39;CL:0000221,9.69e-16,44;CL:0000133,9.69e-16,44;CL:0002319,4.78e-15,43;CL:0000117,4.03e-12,23;CL:0000337,4.03e-12,23;CL:0000107,5.77e-12,9;CL:0002321,2.32e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.18e-29!102;UBERON:0000924!5.18e-29!102;UBERON:0006601!5.18e-29!102;UBERON:0001017!2.45e-26!73;UBERON:0005743!2.45e-26!73;UBERON:0000073!1.14e-25!75;UBERON:0001016!1.14e-25!75;UBERON:0002346!3.68e-24!71;UBERON:0003075!3.68e-24!71;UBERON:0007284!3.68e-24!71;UBERON:0000033!1.23e-18!63;UBERON:0001049!2.39e-17!52;UBERON:0005068!2.39e-17!52;UBERON:0006241!2.39e-17!52;UBERON:0007135!2.39e-17!52;UBERON:0000955!3.53e-16!50;UBERON:0006238!3.53e-16!50;UBERON:0003056!1.22e-15!49;UBERON:0002616!1.67e-15!49;UBERON:0002020!5.13e-14!34;UBERON:0003080!8.70e-13!40;UBERON:0002780!3.67e-12!39;UBERON:0001890!3.67e-12!39;UBERON:0006240!3.67e-12!39;UBERON:0002791!3.15e-11!29;UBERON:0003528!3.15e-11!29;UBERON:0001893!3.15e-11!29;UBERON:0002410!3.73e-08!9;UBERON:0000956!5.11e-08!21;UBERON:0001869!5.11e-08!21;UBERON:0000203!5.11e-08!21;UBERON:0007811!9.65e-08!86;UBERON:0000153!1.11e-07!94;UBERON:0002021!1.58e-07!10;UBERON:0000411!1.58e-07!10;UBERON:0001950!1.58e-07!10;UBERON:0002619!4.15e-07!17;UBERON:0000010!8.32e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.66e-36,73;UBERON:0001016,5.07e-35,75;UBERON:0004121,2.31e-33,95;UBERON:0000924,2.31e-33,95;UBERON:0006601,2.31e-33,95;UBERON:0002346,5.91e-28,64;UBERON:0003075,5.91e-28,64;UBERON:0007284,5.91e-28,64;UBERON:0010371,3.08e-26,73;UBERON:0000073,3.60e-24,54;UBERON:0001049,1.37e-22,52;UBERON:0005068,1.37e-22,52;UBERON:0006241,1.37e-22,52;UBERON:0007135,1.37e-22,52;UBERON:0010314,3.92e-20,92;UBERON:0002020,1.84e-19,34;UBERON:0000955,2.27e-18,47;UBERON:0006238,2.27e-18,47;UBERON:0002616,2.11e-17,46;UBERON:0003056,1.07e-16,49;UBERON:0003528,3.71e-15,29;UBERON:0002791,3.71e-15,29;UBERON:0001893,3.71e-15,29;UBERON:0003080,7.45e-15,40;UBERON:0002780,5.91e-14,39;UBERON:0001890,5.91e-14,39;UBERON:0006240,5.91e-14,39;UBERON:0002410,5.77e-12,9;UBERON:0000956,4.48e-11,21;UBERON:0001869,4.48e-11,21;UBERON:0000203,4.48e-11,21;UBERON:0002021,5.59e-11,10;UBERON:0000411,5.59e-11,10;UBERON:0001950,5.59e-11,10;UBERON:0002619,3.86e-10,17;UBERON:0000010,3.09e-09,11;UBERON:0003076,1.06e-08,12;UBERON:0003057,1.06e-08,12;UBERON:0002240,8.61e-07,6;UBERON:0005174,8.61e-07,6;UBERON:0001137,8.61e-07,6|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,1.76255545165808,1.31790010585369,1.83546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,1.01158230429799,1.5869729378161,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,1.03689612308478,0.270011876663381,1.26194976810829,5.42736870367227,3.97563373712904,1.34739879136449,1.0543001812006,0.919218786610021,4.40463523997555,3.44755812830007,4.76180253094355,0.791317726381163,1.09785172322892,2.08365348222704,3.90856198601933,4.50210088025344,4.27835093775068,7.07108605136802,5.41012387036591,2.05039390407831,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,2.39433813620357,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,1.21439728736295,1.21786191324856,0.691846491768175,0.60289056221049,2.70454026412121,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,0,29.5708604981663,28.6941988334433,0,0,0,0,7.78911324905078,2.74500361691176,1.7591609295801,6.43149984711423,6.13717097592793,4.77912502486988,5.353961681236,1.62942982160506,0.373220911830279,0,0.841767423545896,0.910843100738926,0.689706313300419,1.80062129805349,1.80845781402858,1.97305847538851,2.43416068541215,1.68663104207512,1.03481348295606,0.215567992932842,0.567318240503458,0.703804496655795,0.219195732427575,0.556094498451196,0.696504333044333,0.205782136407943,1.19420560091096,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,3.78521907415429,2.98423375899925,0,0,0.853153002140936,0.464473343720877,1.28867461322093,0.80673409849337,0.889512175379481,0.570676878337677,0,0.494096864172033,0.251335208800269,0.795825888164603,0.19496408711912,0,0.432276099749388,0.199141273254367,0.948339504765408,2.28497025219458,4.50830942692322,1.83286195060783,0.969762435838129,1.82353131714828,1.83385957660346,0.442830443938806,0.627994911365499,0.616985819609003,0,0,0.196558995113203,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.651859905768103,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,8.99083303931635,6.68106613575558,0,0,36.5989534522858,36.3108032195874,43.3001029442926,36.5622260867405,31.4146130456176,33.4030306330822,36.0281524490656,26.5952830699294,27.2748566783101,17.9939937196212,0,0.890328018336276,1.46598263418218,0.824850614862677,0,0,0,0,0,0.922305443831782,0,0,0,0,0,0,2.38307724027652,0.720244376125241,0.258717367565509,0,0.886701168211368,0.535106452806212,1.31639216481697,0.304464949114599,0,0,0.441056796109924,0.16488625294148,1.45317984026315,0.663442174209714,0.716234064018819,0.820704498725306,0.291480836629851,7.23158677840988,0,0,0.370389054739423,0,0,0,0,0,0,0,0.949007980743406,1.42323626988794,1.40406943068342,1.04544148007234,0.218362563746178,0.674321731924103,0.41326727862668,0.26175594198403,0,0,0,0.897099276263873,0.496375471371293,0.972255941720238,0.516639293910924,1.01373675294467,1.76035857968631,0.5208175393758,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,5.64751842617067,6.44455331110048,4.01026859407578,3.60891682921744,6.16574267793578,8.3093328712867,6.75022500231806,8.55610286126019,5.89085131679466,7.24864436452548,0,0.399024873401031,0.682934423016537,0.729320151204882,0.838452650511929,0.919217542250071,0.888986911206461,0.618105171716683,0.64183841918363,1.01078884705519,0.50695859978048,0.188626341386076,0.749132059759059,0.960377286073039,1.03383844120104,0.952587382566147,0.695305955669133,2.50781986602817,0.824171801606613,1.17759136107518,0.342869252385415,0.887379030796687,0.238436189947321,0.872078499793971,0.941093804153306,1.01537529470012,0.914639864363863,0.263069711437843,1.08643291076689,0.561142271657738,1.30498519936592,0.29551344712669,0.818462086339379,0.77468420592983,0.771626443924566,1.24905288968973,0.233931608445408,0.429742108096597,0.765153328275374,0.220591419119515,0|short_description=p5@Gria4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14802 | |||
|HGNC= | |||
|MCL_coexpression_id=281 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G5E863,uniprot:Q9Z2W8,uniprot:E9PX01,uniprot:Q8C069 | |||
|association_with_transcript=167bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end | |||
|cluster_id=chr9:4796034..4796066,- | |||
|description=CAGE_peak_5_at_Gria4_5end | |||
|id=chr9:4796034..4796066,- | |||
|ontology_enrichment_celltype=CL:0000540!6.96e-17!33;CL:0000047!6.96e-17!33;CL:0000031!6.96e-17!33;CL:0000404!6.96e-17!33;CL:0000393!1.09e-16!39;CL:0000211!1.09e-16!39;CL:0000221!3.66e-11!44;CL:0000133!3.66e-11!44;CL:0002319!1.03e-10!43;CL:0000055!1.54e-10!50;CL:0000117!6.52e-10!23;CL:0000337!6.52e-10!23;CL:0000107!3.73e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.06e-22,33;CL:0000047,1.06e-22,33;CL:0000031,1.06e-22,33;CL:0000404,1.06e-22,33;CL:0000393,7.50e-22,39;CL:0000211,7.50e-22,39;CL:0000221,9.69e-16,44;CL:0000133,9.69e-16,44;CL:0002319,4.78e-15,43;CL:0000117,4.03e-12,23;CL:0000337,4.03e-12,23;CL:0000107,5.77e-12,9;CL:0002321,2.32e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.18e-29!102;UBERON:0000924!5.18e-29!102;UBERON:0006601!5.18e-29!102;UBERON:0001017!2.45e-26!73;UBERON:0005743!2.45e-26!73;UBERON:0000073!1.14e-25!75;UBERON:0001016!1.14e-25!75;UBERON:0002346!3.68e-24!71;UBERON:0003075!3.68e-24!71;UBERON:0007284!3.68e-24!71;UBERON:0000033!1.23e-18!63;UBERON:0001049!2.39e-17!52;UBERON:0005068!2.39e-17!52;UBERON:0006241!2.39e-17!52;UBERON:0007135!2.39e-17!52;UBERON:0000955!3.53e-16!50;UBERON:0006238!3.53e-16!50;UBERON:0003056!1.22e-15!49;UBERON:0002616!1.67e-15!49;UBERON:0002020!5.13e-14!34;UBERON:0003080!8.70e-13!40;UBERON:0002780!3.67e-12!39;UBERON:0001890!3.67e-12!39;UBERON:0006240!3.67e-12!39;UBERON:0002791!3.15e-11!29;UBERON:0003528!3.15e-11!29;UBERON:0001893!3.15e-11!29;UBERON:0002410!3.73e-08!9;UBERON:0000956!5.11e-08!21;UBERON:0001869!5.11e-08!21;UBERON:0000203!5.11e-08!21;UBERON:0007811!9.65e-08!86;UBERON:0000153!1.11e-07!94;UBERON:0002021!1.58e-07!10;UBERON:0000411!1.58e-07!10;UBERON:0001950!1.58e-07!10;UBERON:0002619!4.15e-07!17;UBERON:0000010!8.32e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.66e-36,73;UBERON:0001016,5.07e-35,75;UBERON:0004121,2.31e-33,95;UBERON:0000924,2.31e-33,95;UBERON:0006601,2.31e-33,95;UBERON:0002346,5.91e-28,64;UBERON:0003075,5.91e-28,64;UBERON:0007284,5.91e-28,64;UBERON:0010371,3.08e-26,73;UBERON:0000073,3.60e-24,54;UBERON:0001049,1.37e-22,52;UBERON:0005068,1.37e-22,52;UBERON:0006241,1.37e-22,52;UBERON:0007135,1.37e-22,52;UBERON:0010314,3.92e-20,92;UBERON:0002020,1.84e-19,34;UBERON:0000955,2.27e-18,47;UBERON:0006238,2.27e-18,47;UBERON:0002616,2.11e-17,46;UBERON:0003056,1.07e-16,49;UBERON:0003528,3.71e-15,29;UBERON:0002791,3.71e-15,29;UBERON:0001893,3.71e-15,29;UBERON:0003080,7.45e-15,40;UBERON:0002780,5.91e-14,39;UBERON:0001890,5.91e-14,39;UBERON:0006240,5.91e-14,39;UBERON:0002410,5.77e-12,9;UBERON:0000956,4.48e-11,21;UBERON:0001869,4.48e-11,21;UBERON:0000203,4.48e-11,21;UBERON:0002021,5.59e-11,10;UBERON:0000411,5.59e-11,10;UBERON:0001950,5.59e-11,10;UBERON:0002619,3.86e-10,17;UBERON:0000010,3.09e-09,11;UBERON:0003076,1.06e-08,12;UBERON:0003057,1.06e-08,12;UBERON:0002240,8.61e-07,6;UBERON:0005174,8.61e-07,6;UBERON:0001137,8.61e-07,6 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,1.76255545165808,1.31790010585369,1.83546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,1.01158230429799,1.5869729378161,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,1.03689612308478,0.270011876663381,1.26194976810829,5.42736870367227,3.97563373712904,1.34739879136449,1.0543001812006,0.919218786610021,4.40463523997555,3.44755812830007,4.76180253094355,0.791317726381163,1.09785172322892,2.08365348222704,3.90856198601933,4.50210088025344,4.27835093775068,7.07108605136802,5.41012387036591,2.05039390407831,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,2.39433813620357,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,1.21439728736295,1.21786191324856,0.691846491768175,0.60289056221049,2.70454026412121,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,0,29.5708604981663,28.6941988334433,0,0,0,0,7.78911324905078,2.74500361691176,1.7591609295801,6.43149984711423,6.13717097592793,4.77912502486988,5.353961681236,1.62942982160506,0.373220911830279,0,0.841767423545896,0.910843100738926,0.689706313300419,1.80062129805349,1.80845781402858,1.97305847538851,2.43416068541215,1.68663104207512,1.03481348295606,0.215567992932842,0.567318240503458,0.703804496655795,0.219195732427575,0.556094498451196,0.696504333044333,0.205782136407943,1.19420560091096,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,3.78521907415429,2.98423375899925,0,0,0.853153002140936,0.464473343720877,1.28867461322093,0.80673409849337,0.889512175379481,0.570676878337677,0,0.494096864172033,0.251335208800269,0.795825888164603,0.19496408711912,0,0.432276099749388,0.199141273254367,0.948339504765408,2.28497025219458,4.50830942692322,1.83286195060783,0.969762435838129,1.82353131714828,1.83385957660346,0.442830443938806,0.627994911365499,0.616985819609003,0,0,0.196558995113203,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.651859905768103,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,8.99083303931635,6.68106613575558,0,0,36.5989534522858,36.3108032195874,43.3001029442926,36.5622260867405,31.4146130456176,33.4030306330822,36.0281524490656,26.5952830699294,27.2748566783101,17.9939937196212,0,0.890328018336276,1.46598263418218,0.824850614862677,0,0,0,0,0,0.922305443831782,0,0,0,0,0,0,2.38307724027652,0.720244376125241,0.258717367565509,0,0.886701168211368,0.535106452806212,1.31639216481697,0.304464949114599,0,0,0.441056796109924,0.16488625294148,1.45317984026315,0.663442174209714,0.716234064018819,0.820704498725306,0.291480836629851,7.23158677840988,0,0,0.370389054739423,0,0,0,0,0,0,0,0.949007980743406,1.42323626988794,1.40406943068342,1.04544148007234,0.218362563746178,0.674321731924103,0.41326727862668,0.26175594198403,0,0,0,0.897099276263873,0.496375471371293,0.972255941720238,0.516639293910924,1.01373675294467,1.76035857968631,0.5208175393758,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,5.64751842617067,6.44455331110048,4.01026859407578,3.60891682921744,6.16574267793578,8.3093328712867,6.75022500231806,8.55610286126019,5.89085131679466,7.24864436452548,0,0.399024873401031,0.682934423016537,0.729320151204882,0.838452650511929,0.919217542250071,0.888986911206461,0.618105171716683,0.64183841918363,1.01078884705519,0.50695859978048,0.188626341386076,0.749132059759059,0.960377286073039,1.03383844120104,0.952587382566147,0.695305955669133,2.50781986602817,0.824171801606613,1.17759136107518,0.342869252385415,0.887379030796687,0.238436189947321,0.872078499793971,0.941093804153306,1.01537529470012,0.914639864363863,0.263069711437843,1.08643291076689,0.561142271657738,1.30498519936592,0.29551344712669,0.818462086339379,0.77468420592983,0.771626443924566,1.24905288968973,0.233931608445408,0.429742108096597,0.765153328275374,0.220591419119515,0 | |||
|short_description=p5@Gria4 | |||
}} |
Revision as of 06:03, 5 August 2015
Short description: | p5@Gria4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gria4_5end |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | 167bp_to_ENSMUST00000027020, ENSMUST00000063508, ENSMUST00000163309, NM_001113180, NM_001113181, NM_019691, uc009obp.2, uc009obq.2, uc012gnm.1_5end |
EntrezGene: | 14802 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.06e-22 | 33 |
neuronal stem cell | 1.06e-22 | 33 |
neuroblast | 1.06e-22 | 33 |
electrically signaling cell | 1.06e-22 | 33 |
electrically responsive cell | 7.50e-22 | 39 |
electrically active cell | 7.50e-22 | 39 |
ectodermal cell | 9.69e-16 | 44 |
neurectodermal cell | 9.69e-16 | 44 |
neural cell | 4.78e-15 | 43 |
CNS neuron (sensu Vertebrata) | 4.03e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.03e-12 | 23 |
autonomic neuron | 5.77e-12 | 9 |
embryonic cell | 2.32e-08 | 70 |