FFCP PHASE1:Mm9::chr17:64681746..64681757,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:64681746..64681757,+
|short_description=p@chr17:64681746..64681757,+
|description=CAGE_peak_at_chr17:64681746..64681757,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=292 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:64681746..64681757,+ | |||
|description=CAGE_peak_at_chr17:64681746..64681757,+ | |||
|id=chr17:64681746..64681757,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.16e-16,8;CL:0000791,7.48e-15,9;CL:0000789,7.48e-15,9;CL:0002420,7.48e-15,9;CL:0002419,7.48e-15,9;CL:0000790,7.48e-15,9;CL:0000084,3.25e-12,11;CL:0000827,3.25e-12,11;CL:0000988,5.19e-12,32;CL:0002032,5.19e-12,32;CL:0000037,5.19e-12,32;CL:0000837,5.19e-12,32;CL:0000219,1.83e-11,54;CL:0000838,3.19e-11,12;CL:0002320,8.97e-11,46;CL:0000134,8.97e-11,46;CL:0000542,2.21e-10,13;CL:0000051,2.21e-10,13;CL:0000815,9.82e-10,1;CL:0000792,9.82e-10,1;CL:0000213,1.19e-09,1;CL:0002078,1.19e-09,1;CL:0000115,1.19e-09,1;CL:0002262,1.19e-09,1;CL:1000398,1.19e-09,1;CL:0002031,3.68e-08,25;CL:0000738,5.31e-08,17;CL:0002087,5.31e-08,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.97e-11,46;UBERON:0002394,1.19e-09,1;UBERON:0001281,1.19e-09,1;UBERON:0000353,1.19e-09,1;UBERON:0003497,1.19e-09,1;UBERON:0003909,1.19e-09,1;UBERON:0003928,1.19e-09,1;UBERON:0003835,1.19e-09,1;UBERON:0003513,1.19e-09,1;UBERON:0001280,1.19e-09,1;UBERON:0004647,1.19e-09,1;UBERON:0002294,1.19e-09,1;UBERON:0001173,1.19e-09,1;UBERON:0004912,1.19e-09,1;UBERON:0005171,1.19e-09,1 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0.500895729946347,0,0,5.29405626110463,0.563154888606667,0.936258105287974,0,0,4.45121897821135,1.92324885321794,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,1.90509202037889,0,0,0.577703239502549,0,0.816677425049476,0,0.7813353445238,0,1.76469446409304,0,0.971020706062307,0.755380907853464,0.506884656097573,0.550640256485045,0,0,0,0,0,1.43752564364972,0,2.17608642603403,0.672187598284928,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0.919218786610021,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0,0.0755715601067855,4.63783181922684,0,0,0,0,0.896053774194671,0,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.599075622529601,1.79970819298022,0.635351135365324,0,0,0.125654352112864,0.173824320192276,0,0.41557608911912,0.162241263067758,0.203678727700633,0,0.505445516867349,0.210441855886474,0.260240885925407,0,0,0,0.0680364991513279,0.2562274405697,0,0,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,2.57347907114715,0,0,0,0.180062061461015,0,0.196764231747404,0,0.697601834251224,0,0.116765342367169,0.493679549740441,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0.671032093801859,0,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0.395287777946524,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,2.04263763452273,0,0,0,0.177340233642274,0.356737635204141,0,0,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.559805809294632,0.276399947608848,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.419226325255965,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0.271608227691724,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0.30246421130683,0.500895729946347,0,0,5.29405626110463,0.563154888606667,0.936258105287974,0,0,4.45121897821135,1.92324885321794,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,1.90509202037889,0,0,0.577703239502549,0,0.816677425049476,0,0.7813353445238,0,1.76469446409304,0,0.971020706062307,0.755380907853464,0.506884656097573,0.550640256485045,0,0,0,0,0,1.43752564364972,0,2.17608642603403,0.672187598284928,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0.919218786610021,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0,0.0755715601067855,4.63783181922684,0,0,0,0,0.896053774194671,0,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.599075622529601,1.79970819298022,0.635351135365324,0,0,0.125654352112864,0.173824320192276,0,0.41557608911912,0.162241263067758,0.203678727700633,0,0.505445516867349,0.210441855886474,0.260240885925407,0,0,0,0.0680364991513279,0.2562274405697,0,0,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,2.57347907114715,0,0,0,0.180062061461015,0,0.196764231747404,0,0.697601834251224,0,0.116765342367169,0.493679549740441,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0.671032093801859,0,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0.395287777946524,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,2.04263763452273,0,0,0,0.177340233642274,0.356737635204141,0,0,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.679913719975421,0.559805809294632,0.276399947608848,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.419226325255965,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0.271608227691724,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr17:64681746..64681757,+ | |||
}} | }} |
Latest revision as of 05:38, 5 August 2015
Short description: | p@chr17:64681746..64681757, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:64681746..64681757, + |
Coexpression cluster: | MCL_coexpression_mm9:292 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.16e-16 | 8 |
mature alpha-beta T cell | 7.48e-15 | 9 |
alpha-beta T cell | 7.48e-15 | 9 |
immature T cell | 7.48e-15 | 9 |
mature T cell | 7.48e-15 | 9 |
immature alpha-beta T cell | 7.48e-15 | 9 |
T cell | 3.25e-12 | 11 |
pro-T cell | 3.25e-12 | 11 |
hematopoietic cell | 5.19e-12 | 32 |
hematopoietic oligopotent progenitor cell | 5.19e-12 | 32 |
hematopoietic stem cell | 5.19e-12 | 32 |
hematopoietic multipotent progenitor cell | 5.19e-12 | 32 |
motile cell | 1.83e-11 | 54 |
lymphoid lineage restricted progenitor cell | 3.19e-11 | 12 |
connective tissue cell | 8.97e-11 | 46 |
mesenchymal cell | 8.97e-11 | 46 |
lymphocyte | 2.21e-10 | 13 |
common lymphoid progenitor | 2.21e-10 | 13 |
regulatory T cell | 9.82e-10 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.82e-10 | 1 |
lining cell | 1.19e-09 | 1 |
meso-epithelial cell | 1.19e-09 | 1 |
endothelial cell | 1.19e-09 | 1 |
endothelial cell of sinusoid | 1.19e-09 | 1 |
endothelial cell of hepatic sinusoid | 1.19e-09 | 1 |
hematopoietic lineage restricted progenitor cell | 3.68e-08 | 25 |
leukocyte | 5.31e-08 | 17 |
nongranular leukocyte | 5.31e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.97e-11 | 46 |
bile duct | 1.19e-09 | 1 |
hepatic sinusoid | 1.19e-09 | 1 |
parenchyma | 1.19e-09 | 1 |
abdomen blood vessel | 1.19e-09 | 1 |
sinusoid | 1.19e-09 | 1 |
digestive system duct | 1.19e-09 | 1 |
abdominal segment blood vessel | 1.19e-09 | 1 |
trunk blood vessel | 1.19e-09 | 1 |
liver parenchyma | 1.19e-09 | 1 |
liver lobule | 1.19e-09 | 1 |
biliary system | 1.19e-09 | 1 |
biliary tree | 1.19e-09 | 1 |
biliary bud | 1.19e-09 | 1 |
hepatic duct | 1.19e-09 | 1 |