FFCP PHASE1:Mm9::chr6:127059535..127059587,-: Difference between revisions
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{{FFCP|EntrezGene=319801|HGNC=|MCL_coexpression_id=311|UniProt=Q8BZA9,B2RWB7|association_with_transcript=0bp_to_ENSMUST00000039913,NM_177003,uc009dvq.2_5end|description=CAGE_peak_1_at_9630033F20Rik_5end|id=chr6:127059535..127059587,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!5.95e-13!50;UBERON:0006238!5.95e-13!50;UBERON:0001049!8.69e-13!52;UBERON:0005068!8.69e-13!52;UBERON:0006241!8.69e-13!52;UBERON:0007135!8.69e-13!52;UBERON:0002346!1.06e-12!71;UBERON:0003075!1.06e-12!71;UBERON:0007284!1.06e-12!71;UBERON:0002616!1.40e-12!49;UBERON:0000033!3.69e-12!63;UBERON:0002020!1.11e-11!34;UBERON:0002791!2.18e-11!29;UBERON:0003528!2.18e-11!29;UBERON:0001893!2.18e-11!29;UBERON:0003056!1.00e-10!49;UBERON:0003080!1.56e-10!40;UBERON:0001017!2.26e-10!73;UBERON:0005743!2.26e-10!73;UBERON:0004121!2.95e-10!102;UBERON:0000924!2.95e-10!102;UBERON:0006601!2.95e-10!102;UBERON:0000073!4.13e-10!75;UBERON:0001016!4.13e-10!75;UBERON:0002780!4.99e-10!39;UBERON:0001890!4.99e-10!39;UBERON:0006240!4.99e-10!39;UBERON:0000956!3.06e-09!21;UBERON:0001869!3.06e-09!21;UBERON:0000203!3.06e-09!21;UBERON:0002619!1.20e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.91e-18,92;UBERON:0000073,3.94e-13,54;UBERON:0001049,8.69e-13,52;UBERON:0005068,8.69e-13,52;UBERON:0006241,8.69e-13,52;UBERON:0007135,8.69e-13,52;UBERON:0002346,3.77e-12,64;UBERON:0003075,3.77e-12,64;UBERON:0007284,3.77e-12,64;UBERON:0000955,4.96e-12,47;UBERON:0006238,4.96e-12,47;UBERON:0002020,1.11e-11,34;UBERON:0002616,1.15e-11,46;UBERON:0003528,2.18e-11,29;UBERON:0002791,2.18e-11,29;UBERON:0001893,2.18e-11,29;UBERON:0003056,1.00e-10,49;UBERON:0003080,1.56e-10,40;UBERON:0001017,2.26e-10,73;UBERON:0010371,2.78e-10,73;UBERON:0001016,4.13e-10,75;UBERON:0002780,4.99e-10,39;UBERON:0001890,4.99e-10,39;UBERON:0006240,4.99e-10,39;UBERON:0004121,1.50e-09,95;UBERON:0000924,1.50e-09,95;UBERON:0006601,1.50e-09,95;UBERON:0000956,3.06e-09,21;UBERON:0001869,3.06e-09,21;UBERON:0000203,3.06e-09,21;UBERON:0002619,1.20e-07,17|phase1_expression=3.36312578920067,4.88565570695105,1.81999695755814,5.74682001482977,7.51343594919521,5.70789524500425,4.67225281191051,7.74739940649458,12.1078301050433,18.0229685267935,15.4096171402954,14.5983050961466,13.353656934634,14.5117868015536,2.6648780945253,1.41732687172878,2.09868563438444,7.25562980323947,8.63820931716154,8.91218268775863,7.313722952992,4.17021995043718,4.96279599363977,5.27974995218242,4.35877634027623,5.16808767703518,2.15380998079537,3.23206849028834,4.56056206695297,4.78857246543868,4.8780712344167,0.635030673459631,1.84519436275371,15.8481681015439,12.9983228888074,12.1351291111699,11.4334839506927,5.85944283031671,4.6880120671428,7.32933241563318,4.70585190424811,5.46436387966757,5.34061388334269,5.5394599909254,4.46058497365864,3.85448179539531,2.34717403304412,9.15705656797875,7.68901639570651,7.97162586204562,7.27929392451885,1.43752564364972,6.20795642413625,12.3311564141929,8.06625117941913,4.3734104126111,8.02293631828519,5.15672092277442,12.3413041124355,12.1667925232568,13.3104594736298,6.77689064138264,9.78224275722253,10.7987966073768,7.9109309005358,6.3943210345149,2.99600110518405,3.07374644257244,13.0648911508682,15.255671031481,14.9330722559481,8.85518051651791,11.0434270475807,11.3916443269907,12.6516021744072,13.7882817991503,13.2139057199266,13.2794831608595,13.0565553267807,11.0784481693363,9.60620257825301,11.4600941522487,16.7509799400829,15.757353080887,13.5990440521361,8.54422897873636,8.39992916714707,10.8111678578674,7.42116694665204,5.66786700800891,4.92769630792852,4.30211938490693,5.439770669662,5.93673510801599,20.1430689408777,16.5769948226014,24.5777735230566,4.60161870960756,2.59786004602869,2.47337702157238,5.0703631119605,1.28326477414318,0,0,8.87613268145978,9.37431502257865,11.62706223534,8.79215873836762,11.6522047641227,13.5082346548991,10.0621489524359,6.39377504455497,7.84092690670599,8.74191315205211,6.70255630673517,11.1843266283411,2.71914464507811,9.9773556274739,23.8844849026466,7.117741397686,15.6797478106879,19.8798853785441,16.775258509631,16.1029438356351,14.0329293565015,14.0501380364725,4.79260498023681,4.79922184794726,4.19331749341113,22.3188052713186,16.4700217014706,9.92669381691629,25.5521750682646,19.9458056717658,22.2333207678729,18.4955039897244,3.66621709861139,8.45967400148633,5.30717792710717,26.9365575534687,7.1566243629487,7.35686734187113,6.66229880279792,6.78171680260718,7.48401490664606,8.71173297936978,6.37171727006156,22.5071932542944,7.11374376678379,3.78212160335639,5.27853372491847,5.91828477554452,6.39508673218875,3.48252166522167,3.08673204611915,6.76716507182877,9.12877143507205,2.83082697826187,6.25159698670304,9.11353399156208,13.6025114789036,11.704033994966,8.52281048106757,12.199382368339,11.8785676923281,19.3003174142839,26.5590667385623,22.3021803921294,27.6460547854647,36.1168420974009,38.183409296098,50.0003956994637,47.20327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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319801 | |||
|HGNC= | |||
|MCL_coexpression_id=311 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BZA9,uniprot:B2RWB7 | |||
|association_with_transcript=0bp_to_ENSMUST00000039913,NM_177003,uc009dvq.2_5end | |||
|cluster_id=chr6:127059535..127059587,- | |||
|description=CAGE_peak_1_at_9630033F20Rik_5end | |||
|id=chr6:127059535..127059587,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!5.95e-13!50;UBERON:0006238!5.95e-13!50;UBERON:0001049!8.69e-13!52;UBERON:0005068!8.69e-13!52;UBERON:0006241!8.69e-13!52;UBERON:0007135!8.69e-13!52;UBERON:0002346!1.06e-12!71;UBERON:0003075!1.06e-12!71;UBERON:0007284!1.06e-12!71;UBERON:0002616!1.40e-12!49;UBERON:0000033!3.69e-12!63;UBERON:0002020!1.11e-11!34;UBERON:0002791!2.18e-11!29;UBERON:0003528!2.18e-11!29;UBERON:0001893!2.18e-11!29;UBERON:0003056!1.00e-10!49;UBERON:0003080!1.56e-10!40;UBERON:0001017!2.26e-10!73;UBERON:0005743!2.26e-10!73;UBERON:0004121!2.95e-10!102;UBERON:0000924!2.95e-10!102;UBERON:0006601!2.95e-10!102;UBERON:0000073!4.13e-10!75;UBERON:0001016!4.13e-10!75;UBERON:0002780!4.99e-10!39;UBERON:0001890!4.99e-10!39;UBERON:0006240!4.99e-10!39;UBERON:0000956!3.06e-09!21;UBERON:0001869!3.06e-09!21;UBERON:0000203!3.06e-09!21;UBERON:0002619!1.20e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.91e-18,92;UBERON:0000073,3.94e-13,54;UBERON:0001049,8.69e-13,52;UBERON:0005068,8.69e-13,52;UBERON:0006241,8.69e-13,52;UBERON:0007135,8.69e-13,52;UBERON:0002346,3.77e-12,64;UBERON:0003075,3.77e-12,64;UBERON:0007284,3.77e-12,64;UBERON:0000955,4.96e-12,47;UBERON:0006238,4.96e-12,47;UBERON:0002020,1.11e-11,34;UBERON:0002616,1.15e-11,46;UBERON:0003528,2.18e-11,29;UBERON:0002791,2.18e-11,29;UBERON:0001893,2.18e-11,29;UBERON:0003056,1.00e-10,49;UBERON:0003080,1.56e-10,40;UBERON:0001017,2.26e-10,73;UBERON:0010371,2.78e-10,73;UBERON:0001016,4.13e-10,75;UBERON:0002780,4.99e-10,39;UBERON:0001890,4.99e-10,39;UBERON:0006240,4.99e-10,39;UBERON:0004121,1.50e-09,95;UBERON:0000924,1.50e-09,95;UBERON:0006601,1.50e-09,95;UBERON:0000956,3.06e-09,21;UBERON:0001869,3.06e-09,21;UBERON:0000203,3.06e-09,21;UBERON:0002619,1.20e-07,17 | |||
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| |||
|short_description=p1@9630033F20Rik | |||
}} |
Revision as of 04:53, 5 August 2015
Short description: | p1@9630033F20Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_9630033F20Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:311 |
Association with transcript: | 0bp_to_ENSMUST00000039913, NM_177003, uc009dvq.2_5end |
EntrezGene: | 319801 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 6.91e-18 | 92 |
regional part of nervous system | 3.94e-13 | 54 |
neural tube | 8.69e-13 | 52 |
neural rod | 8.69e-13 | 52 |
future spinal cord | 8.69e-13 | 52 |
neural keel | 8.69e-13 | 52 |
neurectoderm | 3.77e-12 | 64 |
neural plate | 3.77e-12 | 64 |
presumptive neural plate | 3.77e-12 | 64 |
brain | 4.96e-12 | 47 |
future brain | 4.96e-12 | 47 |
gray matter | 1.11e-11 | 34 |
regional part of brain | 1.15e-11 | 46 |
brain grey matter | 2.18e-11 | 29 |
regional part of telencephalon | 2.18e-11 | 29 |
telencephalon | 2.18e-11 | 29 |
pre-chordal neural plate | 1.00e-10 | 49 |
anterior neural tube | 1.56e-10 | 40 |
central nervous system | 2.26e-10 | 73 |
ecto-epithelium | 2.78e-10 | 73 |
nervous system | 4.13e-10 | 75 |
regional part of forebrain | 4.99e-10 | 39 |
forebrain | 4.99e-10 | 39 |
future forebrain | 4.99e-10 | 39 |
ectoderm-derived structure | 1.50e-09 | 95 |
ectoderm | 1.50e-09 | 95 |
presumptive ectoderm | 1.50e-09 | 95 |
cerebral cortex | 3.06e-09 | 21 |
cerebral hemisphere | 3.06e-09 | 21 |
pallium | 3.06e-09 | 21 |
regional part of cerebral cortex | 1.20e-07 | 17 |