FFCP PHASE1:Mm9::chr4:148800338..148800351,-: Difference between revisions
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{{FFCP|EntrezGene=63958|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=-13bp_to_ENSMUST00000173005_5end|description=CAGE_peak_6_at_Ube4b_5end|id=chr4:148800338..148800351,-|ontology_enrichment_celltype=CL:0000540!1.16e-14!33;CL:0000047!1.16e-14!33;CL:0000031!1.16e-14!33;CL:0000404!1.16e-14!33;CL:0000117!4.37e-12!23;CL:0000337!4.37e-12!23;CL:0000393!4.41e-12!39;CL:0000211!4.41e-12!39;CL:0002319!3.70e-10!43;CL:0000221!5.50e-10!44;CL:0000133!5.50e-10!44;CL:0000055!4.40e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.01e-19,33;CL:0000047,2.01e-19,33;CL:0000031,2.01e-19,33;CL:0000404,2.01e-19,33;CL:0000117,4.44e-17,23;CL:0000337,4.44e-17,23;CL:0000393,5.36e-15,39;CL:0000211,5.36e-15,39;CL:0002319,9.16e-13,43;CL:0000221,2.83e-12,44;CL:0000133,2.83e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.59e-26!73;UBERON:0005743!2.59e-26!73;UBERON:0000073!8.07e-26!75;UBERON:0001016!8.07e-26!75;UBERON:0004121!1.97e-22!102;UBERON:0000924!1.97e-22!102;UBERON:0006601!1.97e-22!102;UBERON:0002346!2.20e-22!71;UBERON:0003075!2.20e-22!71;UBERON:0007284!2.20e-22!71;UBERON:0001049!4.07e-21!52;UBERON:0005068!4.07e-21!52;UBERON:0006241!4.07e-21!52;UBERON:0007135!4.07e-21!52;UBERON:0000955!4.03e-19!50;UBERON:0006238!4.03e-19!50;UBERON:0000033!5.08e-19!63;UBERON:0002616!6.77e-19!49;UBERON:0003056!1.34e-17!49;UBERON:0003080!3.38e-16!40;UBERON:0002780!1.03e-15!39;UBERON:0001890!1.03e-15!39;UBERON:0006240!1.03e-15!39;UBERON:0002020!9.54e-15!34;UBERON:0002791!1.15e-11!29;UBERON:0003528!1.15e-11!29;UBERON:0001893!1.15e-11!29;UBERON:0000153!1.39e-10!94;UBERON:0007811!6.67e-10!86;UBERON:0000956!1.02e-07!21;UBERON:0001869!1.02e-07!21;UBERON:0000203!1.02e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.13e-34,73;UBERON:0001016,2.96e-33,75;UBERON:0002346,1.18e-32,64;UBERON:0003075,1.18e-32,64;UBERON:0007284,1.18e-32,64;UBERON:0000073,2.69e-31,54;UBERON:0004121,1.26e-29,95;UBERON:0000924,1.26e-29,95;UBERON:0006601,1.26e-29,95;UBERON:0001049,1.82e-29,52;UBERON:0005068,1.82e-29,52;UBERON:0006241,1.82e-29,52;UBERON:0007135,1.82e-29,52;UBERON:0010371,7.12e-28,73;UBERON:0003056,3.62e-23,49;UBERON:0002616,3.84e-23,46;UBERON:0000955,2.20e-22,47;UBERON:0006238,2.20e-22,47;UBERON:0003080,3.70e-21,40;UBERON:0010314,1.87e-20,92;UBERON:0002780,2.31e-20,39;UBERON:0001890,2.31e-20,39;UBERON:0006240,2.31e-20,39;UBERON:0002020,8.44e-20,34;UBERON:0003528,8.85e-15,29;UBERON:0002791,8.85e-15,29;UBERON:0001893,8.85e-15,29;UBERON:0003076,1.04e-08,12;UBERON:0003057,1.04e-08,12;UBERON:0000956,1.80e-08,21;UBERON:0001869,1.80e-08,21;UBERON:0000203,1.80e-08,21;UBERON:0002420,3.08e-08,8;UBERON:0007245,3.08e-08,8;UBERON:0010009,3.08e-08,8;UBERON:0010011,3.08e-08,8;UBERON:0000454,3.08e-08,8;UBERON:0000025,6.81e-08,114;UBERON:0002240,1.15e-07,6;UBERON:0005174,1.15e-07,6;UBERON:0001137,1.15e-07,6;UBERON:0004111,4.24e-07,122;UBERON:0002619,4.38e-07,17;UBERON:0001948,9.39e-07,5;UBERON:0002315,9.39e-07,5|phase1_expression=1.28119077683835,0.697950815278722,0.454999239389536,0.90739263392049,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0,0,0,0,0,0.340173160604279,0,0,0.639969691173627,0.45881856213434,0.57423196411502,0.86152399231815,0.646413698057667,0.190023419456374,0,0.221730510655305,0,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0.65407546914134,0,0.194429899074283,0.699932108126813,0,0,0.725362142011344,1.68046899571232,0.771778308107841,0,0.515672092277442,2.42779753031517,1.5869729378161,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,1.03689612308478,1.75507719831198,0.841299845405528,1.71390590642282,4.19650227808066,0.979926393719632,1.43768206527355,1.83843757322004,1.10115880999389,3.19218345212969,2.30409799884365,1.18697658957174,2.37867873366265,2.08365348222704,2.23346399201105,1.12552522006336,1.83357897332172,5.00868595305235,4.12877874317399,1.86399445825301,0.302904773332736,0.604572480854284,0.289864488701678,0,1.3599426674155,0,0,0.896053774194671,0.140444420131752,0.340860645156116,0.779358013808606,0,0.422530259330042,0,0,0,0,0,0,0,0,0.593768556259299,0.520455980298408,0.608930956624282,0.922461989024234,0.301445281105245,1.05829836422134,0.125666591329675,0.247194967734374,0.289198713839823,0,0.485300549842228,0.220841518460394,0,0,1.17112318804619,1.8850203613211,0,0.359445373517761,0.599902730993408,0.508280908292259,1.49790639404823,1.83000241127451,3.14135880282161,2.25971616249959,1.27857728665165,1.0389402227978,3.24482526135515,1.42575109390443,0,0,0,0.780722657776222,0.459804208866946,2.34080768746954,1.9591626318643,2.24520447199382,1.0249097622788,1.03071897015702,1.03481348295606,0.646703978798527,1.13463648100692,0.527853372491847,0.657587197282725,1.39023624612799,1.39300866608867,0.61734640922383,0.398068533636986,0,0,0,1.03562886267751,0.703578179943289,0.36012412292203,0.710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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:63958 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_ENSMUST00000173005_5end | |||
|cluster_id=chr4:148800338..148800351,- | |||
|description=CAGE_peak_6_at_Ube4b_5end | |||
|id=chr4:148800338..148800351,- | |||
|ontology_enrichment_celltype=CL:0000540!1.16e-14!33;CL:0000047!1.16e-14!33;CL:0000031!1.16e-14!33;CL:0000404!1.16e-14!33;CL:0000117!4.37e-12!23;CL:0000337!4.37e-12!23;CL:0000393!4.41e-12!39;CL:0000211!4.41e-12!39;CL:0002319!3.70e-10!43;CL:0000221!5.50e-10!44;CL:0000133!5.50e-10!44;CL:0000055!4.40e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.01e-19,33;CL:0000047,2.01e-19,33;CL:0000031,2.01e-19,33;CL:0000404,2.01e-19,33;CL:0000117,4.44e-17,23;CL:0000337,4.44e-17,23;CL:0000393,5.36e-15,39;CL:0000211,5.36e-15,39;CL:0002319,9.16e-13,43;CL:0000221,2.83e-12,44;CL:0000133,2.83e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.59e-26!73;UBERON:0005743!2.59e-26!73;UBERON:0000073!8.07e-26!75;UBERON:0001016!8.07e-26!75;UBERON:0004121!1.97e-22!102;UBERON:0000924!1.97e-22!102;UBERON:0006601!1.97e-22!102;UBERON:0002346!2.20e-22!71;UBERON:0003075!2.20e-22!71;UBERON:0007284!2.20e-22!71;UBERON:0001049!4.07e-21!52;UBERON:0005068!4.07e-21!52;UBERON:0006241!4.07e-21!52;UBERON:0007135!4.07e-21!52;UBERON:0000955!4.03e-19!50;UBERON:0006238!4.03e-19!50;UBERON:0000033!5.08e-19!63;UBERON:0002616!6.77e-19!49;UBERON:0003056!1.34e-17!49;UBERON:0003080!3.38e-16!40;UBERON:0002780!1.03e-15!39;UBERON:0001890!1.03e-15!39;UBERON:0006240!1.03e-15!39;UBERON:0002020!9.54e-15!34;UBERON:0002791!1.15e-11!29;UBERON:0003528!1.15e-11!29;UBERON:0001893!1.15e-11!29;UBERON:0000153!1.39e-10!94;UBERON:0007811!6.67e-10!86;UBERON:0000956!1.02e-07!21;UBERON:0001869!1.02e-07!21;UBERON:0000203!1.02e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.13e-34,73;UBERON:0001016,2.96e-33,75;UBERON:0002346,1.18e-32,64;UBERON:0003075,1.18e-32,64;UBERON:0007284,1.18e-32,64;UBERON:0000073,2.69e-31,54;UBERON:0004121,1.26e-29,95;UBERON:0000924,1.26e-29,95;UBERON:0006601,1.26e-29,95;UBERON:0001049,1.82e-29,52;UBERON:0005068,1.82e-29,52;UBERON:0006241,1.82e-29,52;UBERON:0007135,1.82e-29,52;UBERON:0010371,7.12e-28,73;UBERON:0003056,3.62e-23,49;UBERON:0002616,3.84e-23,46;UBERON:0000955,2.20e-22,47;UBERON:0006238,2.20e-22,47;UBERON:0003080,3.70e-21,40;UBERON:0010314,1.87e-20,92;UBERON:0002780,2.31e-20,39;UBERON:0001890,2.31e-20,39;UBERON:0006240,2.31e-20,39;UBERON:0002020,8.44e-20,34;UBERON:0003528,8.85e-15,29;UBERON:0002791,8.85e-15,29;UBERON:0001893,8.85e-15,29;UBERON:0003076,1.04e-08,12;UBERON:0003057,1.04e-08,12;UBERON:0000956,1.80e-08,21;UBERON:0001869,1.80e-08,21;UBERON:0000203,1.80e-08,21;UBERON:0002420,3.08e-08,8;UBERON:0007245,3.08e-08,8;UBERON:0010009,3.08e-08,8;UBERON:0010011,3.08e-08,8;UBERON:0000454,3.08e-08,8;UBERON:0000025,6.81e-08,114;UBERON:0002240,1.15e-07,6;UBERON:0005174,1.15e-07,6;UBERON:0001137,1.15e-07,6;UBERON:0004111,4.24e-07,122;UBERON:0002619,4.38e-07,17;UBERON:0001948,9.39e-07,5;UBERON:0002315,9.39e-07,5 | |||
|phase1_expression=1.28119077683835,0.697950815278722,0.454999239389536,0.90739263392049,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0,0,0,0,0,0.340173160604279,0,0,0.639969691173627,0.45881856213434,0.57423196411502,0.86152399231815,0.646413698057667,0.190023419456374,0,0.221730510655305,0,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0.65407546914134,0,0.194429899074283,0.699932108126813,0,0,0.725362142011344,1.68046899571232,0.771778308107841,0,0.515672092277442,2.42779753031517,1.5869729378161,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,1.03689612308478,1.75507719831198,0.841299845405528,1.71390590642282,4.19650227808066,0.979926393719632,1.43768206527355,1.83843757322004,1.10115880999389,3.19218345212969,2.30409799884365,1.18697658957174,2.37867873366265,2.08365348222704,2.23346399201105,1.12552522006336,1.83357897332172,5.00868595305235,4.12877874317399,1.86399445825301,0.302904773332736,0.604572480854284,0.289864488701678,0,1.3599426674155,0,0,0.896053774194671,0.140444420131752,0.340860645156116,0.779358013808606,0,0.422530259330042,0,0,0,0,0,0,0,0,0.593768556259299,0.520455980298408,0.608930956624282,0.922461989024234,0.301445281105245,1.05829836422134,0.125666591329675,0.247194967734374,0.289198713839823,0,0.485300549842228,0.220841518460394,0,0,1.17112318804619,1.8850203613211,0,0.359445373517761,0.599902730993408,0.508280908292259,1.49790639404823,1.83000241127451,3.14135880282161,2.25971616249959,1.27857728665165,1.0389402227978,3.24482526135515,1.42575109390443,0,0,0,0.780722657776222,0.459804208866946,2.34080768746954,1.9591626318643,2.24520447199382,1.0249097622788,1.03071897015702,1.03481348295606,0.646703978798527,1.13463648100692,0.527853372491847,0.657587197282725,1.39023624612799,1.39300866608867,0.61734640922383,0.398068533636986,0,0,0,1.03562886267751,0.703578179943289,0.36012412292203,0.710234206755631,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0.329119699826961,0,0,0.146199987425332,0,0.402619256281115,2.10289948564127,2.36680608472354,0.660837565967596,0,0,0.464473343720877,0.77320476793256,0.605050573870028,1.11189021922435,0.570676878337677,0,0,0,0.397912944082302,0.779856348476481,0,0.216138049874694,0,0.379335801906163,0.913988100877831,0,0.814605311381257,0.387904974335251,0.561086559122548,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0.608580364165509,0,0.25462585178142,0,0.810676133875177,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.651859905768103,0.678980343100753,0.234690248288502,0,0.238043640886014,0,0,0.44292937929755,0,0,0,0,0,0,0.491764273019036,0.275936746304732,2.88991061978026,2.10981035865966,0.327869890753351,0,1.57754109708128,1.56175497718655,0.215423397732799,1.43381278771531,0.891194696329576,0.849229592366497,1.21443210502468,1.46127928955656,1.58115111178609,0.963963949265421,0.709700426041343,1.06839362200353,1.14020871547503,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,1.47650946440386,0.307435147943927,1.03371317267288,0,2.49548164869305,0,0,0,1.02131881726136,1.08036656418786,1.81102157295856,1.07168517515796,1.06404140185364,2.31879462882692,0.987294123612726,3.65357938937519,0.704015124191131,0,0,0,0.968786560175433,0.120625849856312,0.238744688006273,0,0,2.03967832211561,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0.339956859987711,0.279902904647316,0.414599921413271,0,1.10717597753397,0.813277868507395,1.29606408986162,0.209088296014469,0,0.944050424693745,0.247960367176008,0,0,0,1.69107881605257,0.747582730219894,0.66183396182839,0.777804753376191,1.42075805825504,0.844780627453891,1.17357238645754,0.5208175393758,0.943734099831398,0.724752362478018,1.44015003128933,0.316011120628178,0.810900861160657,0.102710957164827,0.51968329191118,0.537080087002444,0.198681354781265,0.240390899039938,0.295379054349154,0.302899349844443,0.457240839929999,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,0,1.10992976687032,0.717710852875806,0.335769232728157,0,0,0.36630324853453,0.214368379079066,0,4.51801474093653,4.14292712856459,5.15605962095457,3.95262319390481,0.685082519770642,0.755393897389701,2.02506750069542,2.2516060161211,0.906284817968409,4.65984280576638,1.24544817101012,0.399024873401031,0.512200817262403,1.21553358534147,0.628839487883947,1.2869045591501,0.666740183404846,1.03017528619447,0.320919209591815,1.01078884705519,1.2673964994512,0.754505365544305,0.749132059759059,0.89635213366817,0.746661096422973,0.476293691283074,0.579421629724277,0.578727661391115,0.824171801606613,0.883193520806384,0.342869252385415,1.06485483695602,0.476872379894642,1.0174249164263,0.752875043322645,0.592302255241736,0.182927972872773,1.31534855718921,0.950628796921032,0.561142271657738,0.474540072496697,0.689531376628944,0.818462086339379,0.464810523557898,0.7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| |||
|short_description=p6@Ube4b | |||
}} |
Revision as of 04:45, 5 August 2015
Short description: | p6@Ube4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ube4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -13bp_to_ENSMUST00000173005_5end |
EntrezGene: | 63958 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.01e-19 | 33 |
neuronal stem cell | 2.01e-19 | 33 |
neuroblast | 2.01e-19 | 33 |
electrically signaling cell | 2.01e-19 | 33 |
CNS neuron (sensu Vertebrata) | 4.44e-17 | 23 |
neuroblast (sensu Vertebrata) | 4.44e-17 | 23 |
electrically responsive cell | 5.36e-15 | 39 |
electrically active cell | 5.36e-15 | 39 |
neural cell | 9.16e-13 | 43 |
ectodermal cell | 2.83e-12 | 44 |
neurectodermal cell | 2.83e-12 | 44 |