FFCP PHASE1:Mm9::chr4:147732971..147732980,-: Difference between revisions
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|id=chr4:147732971..147732980,-
|short_description=p@chr4:147732971..147732980,-
|description=CAGE_peak_at_chr4:147732971..147732980,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=234 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:147732971..147732980,- | |||
|description=CAGE_peak_at_chr4:147732971..147732980,- | |||
|id=chr4:147732971..147732980,- | |||
|ontology_enrichment_celltype=CL:0000117!2.98e-28!23;CL:0000337!2.98e-28!23;CL:0000540!3.80e-19!33;CL:0000047!3.80e-19!33;CL:0000031!3.80e-19!33;CL:0000404!3.80e-19!33;CL:0000393!6.44e-16!39;CL:0000211!6.44e-16!39;CL:0002610!1.72e-15!3;CL:0002614!1.92e-15!3;CL:0002319!2.91e-14!43;CL:0000221!6.76e-14!44;CL:0000133!6.76e-14!44;CL:0000055!5.29e-12!50;CL:0002611!1.29e-10!2;CL:0002321!5.03e-08!70;CL:0000220!5.03e-08!70;CL:0002612!2.72e-07!3;CL:0000723!8.10e-07!91;CL:0000048!8.10e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.75e-43,3;CL:0000117,4.18e-23,23;CL:0000337,4.18e-23,23;CL:0002614,1.01e-20,3;CL:0000540,2.90e-16,33;CL:0000047,2.90e-16,33;CL:0000031,2.90e-16,33;CL:0000404,2.90e-16,33;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002611,1.53e-08,2;CL:0002321,7.20e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001948!1.28e-15!5;UBERON:0002315!1.28e-15!5;UBERON:0004684!1.72e-15!3;UBERON:0002275!1.72e-15!3;UBERON:0002038!1.92e-15!3;UBERON:0002308!1.92e-15!3;UBERON:0009663!1.92e-15!3;UBERON:0009661!1.92e-15!3;UBERON:0006331!1.92e-15!3;UBERON:0000125!1.92e-15!3;UBERON:0002240!4.75e-13!6;UBERON:0005174!4.75e-13!6;UBERON:0001137!4.75e-13!6;UBERON:0002020!1.44e-12!34;UBERON:0002950!1.03e-11!4;UBERON:0001891!1.03e-11!4;UBERON:0009616!1.03e-11!4;UBERON:0002256!1.29e-10!2;UBERON:0002420!7.91e-10!8;UBERON:0007245!7.91e-10!8;UBERON:0010009!7.91e-10!8;UBERON:0010011!7.91e-10!8;UBERON:0000454!7.91e-10!8;UBERON:0001017!4.22e-09!73;UBERON:0005743!4.22e-09!73;UBERON:0000073!8.40e-09!75;UBERON:0001016!8.40e-09!75;UBERON:0002298!5.78e-08!6;UBERON:0001049!1.06e-07!52;UBERON:0005068!1.06e-07!52;UBERON:0006241!1.06e-07!52;UBERON:0007135!1.06e-07!52;UBERON:0002257!2.72e-07!3;UBERON:0004121!5.32e-07!102;UBERON:0000924!5.32e-07!102;UBERON:0006601!5.32e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.75e-43,3;UBERON:0002275,1.75e-43,3;UBERON:0002038,1.01e-20,3;UBERON:0009663,1.01e-20,3;UBERON:0009661,1.01e-20,3;UBERON:0000125,1.01e-20,3;UBERON:0002308,1.01e-20,3;UBERON:0002950,8.06e-16,4;UBERON:0001891,8.06e-16,4;UBERON:0009616,8.06e-16,4;UBERON:0010286,8.06e-16,4;UBERON:0000073,4.19e-10,54;UBERON:0002256,1.53e-08,2;UBERON:0002420,2.07e-08,8;UBERON:0007245,2.07e-08,8;UBERON:0010009,2.07e-08,8;UBERON:0010011,2.07e-08,8;UBERON:0000454,2.07e-08,8;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,2.55374676170375,1.0752457327937,0,0.0914876436024097,0,0.279182999001381,2.8138130501584,3.97275444219706,0.589257170947335,0.996601765593721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,2.55374676170375,1.0752457327937,0,0.0914876436024097,0,0.279182999001381,2.8138130501584,3.97275444219706,0.589257170947335,0.996601765593721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:147732971..147732980,- | |||
}} | }} |
Latest revision as of 04:19, 5 August 2015
Short description: | p@chr4:147732971..147732980, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:147732971..147732980, - |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.75e-43 | 3 |
CNS neuron (sensu Vertebrata) | 4.18e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.18e-23 | 23 |
neuron of the substantia nigra | 1.01e-20 | 3 |
neuron | 2.90e-16 | 33 |
neuronal stem cell | 2.90e-16 | 33 |
neuroblast | 2.90e-16 | 33 |
electrically signaling cell | 2.90e-16 | 33 |
electrically responsive cell | 7.80e-14 | 39 |
electrically active cell | 7.80e-14 | 39 |
neural cell | 1.38e-12 | 43 |
ectodermal cell | 2.60e-12 | 44 |
neurectodermal cell | 2.60e-12 | 44 |
neuron of the dorsal spinal cord | 1.53e-08 | 2 |
embryonic cell | 7.20e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.75e-43 | 3 |
reticular formation | 1.75e-43 | 3 |
substantia nigra | 1.01e-20 | 3 |
telencephalic nucleus | 1.01e-20 | 3 |
midbrain nucleus | 1.01e-20 | 3 |
neural nucleus | 1.01e-20 | 3 |
nucleus of brain | 1.01e-20 | 3 |
regional part of midbrain | 8.06e-16 | 4 |
midbrain | 8.06e-16 | 4 |
presumptive midbrain | 8.06e-16 | 4 |
midbrain neural tube | 8.06e-16 | 4 |
regional part of nervous system | 4.19e-10 | 54 |
dorsal horn of spinal cord | 1.53e-08 | 2 |
basal ganglion | 2.07e-08 | 8 |
nuclear complex of neuraxis | 2.07e-08 | 8 |
aggregate regional part of brain | 2.07e-08 | 8 |
collection of basal ganglia | 2.07e-08 | 8 |
cerebral subcortex | 2.07e-08 | 8 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |