FFCP PHASE1:Mm9::chr7:3655627..3655653,+: Difference between revisions
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{{FFCP|EntrezGene=76846|HGNC=|MCL_coexpression_id=81|UniProt=Q9CXW7,Q6ZWN5,D3YUV6|association_with_transcript=0bp_to_ENSMUST00000108623,ENSMUST00000108625,ENSMUST00000128729,ENSMUST00000139818,ENSMUST00000146303,NM_029767,uc009evz.1,uc009ewa.1_5end|description=CAGE_peak_1_at_Rps9_5end|id=chr7:3655627..3655653,+|ontology_enrichment_celltype=CL:0000144!8.56e-32!121;CL:0000012!8.56e-32!121;CL:0002371!7.12e-30!118;CL:0000548!3.27e-28!115;CL:0000004!3.27e-28!115;CL:0000255!3.27e-28!115;CL:0000063!6.35e-26!66;CL:0000034!1.98e-23!97;CL:0000723!2.59e-20!91;CL:0000048!2.59e-20!91;CL:0000988!7.24e-17!32;CL:0002032!7.24e-17!32;CL:0000037!7.24e-17!32;CL:0000566!7.24e-17!32;CL:0000837!7.24e-17!32;CL:0002320!9.14e-17!46;CL:0000134!9.14e-17!46;CL:0000219!4.70e-16!54;CL:0002031!6.89e-14!25;CL:0000738!7.68e-10!17;CL:0002087!7.68e-10!17;CL:0000049!2.05e-09!19;CL:0000542!1.23e-08!13;CL:0000051!1.23e-08!13;CL:0000838!2.00e-08!12;CL:0000084!9.97e-08!11;CL:0000827!9.97e-08!11;CL:0000763!1.00e-07!16;CL:0002321!1.79e-07!70;CL:0000220!1.79e-07!70;CL:0000791!2.71e-07!9;CL:0000789!2.71e-07!9;CL:0002420!2.71e-07!9;CL:0002419!2.71e-07!9;CL:0000790!2.71e-07!9;CL:0002076!3.54e-07!15;CL:0000066!6.18e-07!25;CL:0000839!7.51e-07!13|ontology_enrichment_celltype_v019_2=CL:0000034,1.98e-23,97;CL:0000723,2.59e-20,91;CL:0000048,2.59e-20,91;CL:0000988,7.24e-17,32;CL:0002032,7.24e-17,32;CL:0000037,7.24e-17,32;CL:0000837,7.24e-17,32;CL:0002320,9.14e-17,46;CL:0000134,9.14e-17,46;CL:0000219,4.70e-16,54;CL:0002031,6.89e-14,25;CL:0000738,7.68e-10,17;CL:0002087,7.68e-10,17;CL:0000049,2.05e-09,19;CL:0000542,1.23e-08,13;CL:0000051,1.23e-08,13;CL:0000838,2.00e-08,12;CL:0000084,9.97e-08,11;CL:0000827,9.97e-08,11;CL:0000763,1.00e-07,16;CL:0002321,1.79e-07,70;CL:0000791,2.71e-07,9;CL:0000789,2.71e-07,9;CL:0002420,2.71e-07,9;CL:0002419,2.71e-07,9;CL:0000790,2.71e-07,9;CL:0002076,3.54e-07,15;CL:0000066,6.18e-07,25;CL:0000839,7.51e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!9.14e-17!46;UBERON:0002193!6.88e-13!48;UBERON:0002390!7.34e-12!45;UBERON:0003061!7.34e-12!45;UBERON:0002371!2.39e-07!16;UBERON:0002405!7.29e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.14e-17,46;UBERON:0002193,6.88e-13,48;UBERON:0002405,6.88e-13,48;UBERON:0002390,7.34e-12,45;UBERON:0003061,7.34e-12,45;UBERON:0002371,2.39e-07,16|phase1_expression=58.9347757345642,27.9180326111489,37.7649368693315,44.462239062104,41.0734498556005,59.7650208006328,144.839837169226,173.283500058595,246.521052487568,273.153302217766,274.976056970161,161.618394124552,247.898656940386,189.964534456481,20.3196954707554,135.455953883794,119.625081159913,263.726370239487,222.399611308508,255.482570382414,8.50432901510698,19.9574811913779,245.26660200146,144.63315020524,141.545526418444,52.8293406985819,73.2295393470427,62.7021287115937,114.394098512737,60.2352010126234,63.1931955367618,81.2839262028328,36.9038872550742,79.2408405077194,73.9460146563263,102.068072250114,85.751129630195,62.3612129797993,68.7575103180944,75.9109428762007,59.9996117791635,74.4519578604706,72.826552954673,13.3450627054112,15.8148012702443,13.7660064121261,27.3836970521814,21.8025156380447,8.12838876117546,13.6100929351998,17.2183298599196,14.3752564364972,298.988603994886,259.679646840061,240.307066386862,15.6928255981928,11.747871037489,13.4074743992135,19.2200637816618,22.7466121086974,31.691570175309,22.0248945844936,32.014612660001,27.4469413770827,32.6325899647102,28.419204597844,22.4700082888804,22.6688800139717,24.3670588924922,31.3213776929522,28.604194743788,17.1390590642282,20.3199057675484,28.0503930202245,32.9708420302733,36.7687514644008,8.8092704799511,14.5563565417114,20.7368819895929,23.7395317914349,24.7016637726506,23.962015045611,20.1011759280994,29.2636557216474,19.0997809721013,15.0260578591571,18.9354335462807,21.063137378259,110.333063686449,76.8562766286009,96.235010248957,102.390441360785,23.1190253460635,11.3337670243942,7.79731700937203,9.40856462904405,9.12888730856387,13.9752864514007,122.359208167951,184.796597468908,72.2526743454371,112.9273001246,22.9324715735981,21.3320010945999,111.059904038753,118.825776907821,120.314817913518,7.53613606145796,18.125651855302,7.71899123137089,21.8591511725331,15.5277393939192,17.5267777914604,15.6751546174727,12.2292255421133,9.29932775839599,6.42706916109372,8.96516012903452,8.84610551949874,10.5148452465816,11.0420759230197,11.6370060752453,5.59175283654366,12.296793474485,14.2423760633149,10.9846533739694,128.321998345841,191.96887391789,116.269257771854,13.7807388252437,11.8950156732843,18.5968441127039,11.4724051326902,7.92717917724025,13.0906468072523,14.4394724130304,15.6832620329487,11.5698482667387,15.9215337813215,8.20723237957248,23.9421615051375,17.7024620413774,15.48534316326,17.9338733224501,15.4442853073514,22.8042422107033,16.6789069716317,12.9351685369508,20.2633913356872,17.9650776159428,19.3546236580344,18.1932457914887,20.2974491934686,19.5021213252413,16.4625709126355,20.8985980159418,87.7766484141544,173.709837302433,18.7547909601091,10.3562886267751,14.0715635988658,15.4853372856473,8.75955521665278,15.1508458445501,16.0437797402873,14.6496385192757,13.413670069981,10.9759421825139,9.37991144506839,11.1633875573785,7.53939928776458,11.6959989940266,9.66020507280623,9.79706856950714,10.9350773253346,17.6995933292369,3.96502539580558,8.72686869989696,27.5141843190452,21.5980104830208,17.3971072784826,11.0925938542838,12.8979265430025,8.56015317506516,9.01605216934572,10.5407331023367,10.8074139784116,10.3457365461398,8.77338392036041,13.4822911298133,12.752144942607,9.95706366271836,23.7084876191352,23.5351935976041,16.9061603509621,22.1979947351393,18.8133912552597,11.6425461017929,10.7502113111237,7.0852871030209,7.84993639206874,8.26760998276064,9.19003143970162,19.1871871573508,16.7075145846223,20.2375901146368,12.3744674046987,14.7118067448974,16.2960545140109,13.2340223227373,14.9164408633033,11.5315793538994,15.814502718009,11.1642284300551,12.4815069245824,6.31447194867779,7.53469136792031,9.64887042726734,6.46636165583116,20.0860896476714,16.1335326677606,23.424821836976,22.2955735874077,13.2329943379034,13.8065311713888,12.4885534628991,11.3497303756458,11.7376285513851,11.0023790373666,12.1258852889646,13.1240586218081,11.7165737451024,214.123623193767,95.7274003520929,10.3270497333998,16.0043312856745,14.1284519189257,16.2924244363162,16.7213644284209,8.58401152494868,23.9786246756355,18.7410597262386,18.0955654095551,17.9226598464414,19.6062833192507,18.1168979704853,12.1443210502468,22.7959569170823,24.5078422326845,14.1381379225595,11.4971469018698,26.7098405500883,15.4742611385897,15.8371318053634,17.2568679841952,25.2491861601181,26.3021494559333,18.6719028958339,23.0335476447003,14.1420168054207,13.6966995379157,15.9954840970102,12.83390562185,17.0659849285341,4.21674434299995,7.21948802737308,13.9580238359053,22.1475145658512,23.4139217646786,19.2903331528433,16.847322196016,19.0854634834215,21.5559216988778,21.312546438022,9.62154003061212,5.08396970073168,13.2317038832977,14.6748765117917,10.0107944551461,12.002272060703,13.130957840345,15.2651036762907,13.1166376483433,11.4963687246516,17.428829841381,20.0195261924326,23.7048995033231,21.2856356415301,15.9932246433599,21.0475919350001,96.8877050964975,90.828492558054,92.3175825013551,5.72802370809068,17.3984796469624,15.0456405673868,19.3329560071024,19.4452115293456,15.940467153471,14.1607563704062,9.83576123131498,8.11443420150492,8.94343315713371,8.69875038321696,8.45539408026285,20.7827999001131,21.1786867785085,17.1117045742762,23.7654075199025,19.767866682421,17.0167996036343,11.9788034056434,10.4859344425711,7.00593950395418,9.50499020650956,12.0084225838708,23.3133997583689,23.0072544049213,22.3463815521807,19.8719632190904,14.9011016085949,18.7504901251151,23.039566239234,25.7464447367776,19.35652889037,21.9801083598312,20.9534443590468,21.5514525274338,21.6222269035903,10.2028672626845,73.6993365201895,64.8631183286509,71.5188465710974,10.8186172658027,9.19644129710792,16.3004945597866,13.076471123823,13.0408747049194,9.03602948187307,10.1271552031579,8.02053718815155,20.9660882459299,10.2762377965596,9.82012066606611,14.1754725048679,10.3573876741571,9.5159905886683,8.80192529978094,14.3226539666164,11.9707462020309,19.4636310559713,17.7467903459855,9.22297915563122,11.2144540154509,12.2235700290888,13.8043488350059,12.8367683836726,11.6240717411347,10.3926512954998,11.5062068245506,13.3907355681932,12.5489298713544,13.4973352045691,8.57328644309533,10.6613579869267,13.8894638733868,14.0109206273124,14.4254941731709,18.172070376427,14.3755402989063,16.9289694862598,16.8601843293501,12.9870944973156,14.9767855968267,17.0123014771678,14.994973551957,13.4446072707403,17.3954104213899,8.66035632306471,10.835493061312,13.9138554677694,12.0850736125053,11.3814900478873,12.7403394748352,12.6323068560521,7.09074478359384,12.0511649203371,6.83833399270498,9.27471342481686|short_description=p1@Rps9}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76846 | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CXW7,uniprot:Q6ZWN5,uniprot:D3YUV6 | |||
|association_with_transcript=0bp_to_ENSMUST00000108623,ENSMUST00000108625,ENSMUST00000128729,ENSMUST00000139818,ENSMUST00000146303,NM_029767,uc009evz.1,uc009ewa.1_5end | |||
|cluster_id=chr7:3655627..3655653,+ | |||
|description=CAGE_peak_1_at_Rps9_5end | |||
|id=chr7:3655627..3655653,+ | |||
|ontology_enrichment_celltype=CL:0000144!8.56e-32!121;CL:0000012!8.56e-32!121;CL:0002371!7.12e-30!118;CL:0000548!3.27e-28!115;CL:0000004!3.27e-28!115;CL:0000255!3.27e-28!115;CL:0000063!6.35e-26!66;CL:0000034!1.98e-23!97;CL:0000723!2.59e-20!91;CL:0000048!2.59e-20!91;CL:0000988!7.24e-17!32;CL:0002032!7.24e-17!32;CL:0000037!7.24e-17!32;CL:0000566!7.24e-17!32;CL:0000837!7.24e-17!32;CL:0002320!9.14e-17!46;CL:0000134!9.14e-17!46;CL:0000219!4.70e-16!54;CL:0002031!6.89e-14!25;CL:0000738!7.68e-10!17;CL:0002087!7.68e-10!17;CL:0000049!2.05e-09!19;CL:0000542!1.23e-08!13;CL:0000051!1.23e-08!13;CL:0000838!2.00e-08!12;CL:0000084!9.97e-08!11;CL:0000827!9.97e-08!11;CL:0000763!1.00e-07!16;CL:0002321!1.79e-07!70;CL:0000220!1.79e-07!70;CL:0000791!2.71e-07!9;CL:0000789!2.71e-07!9;CL:0002420!2.71e-07!9;CL:0002419!2.71e-07!9;CL:0000790!2.71e-07!9;CL:0002076!3.54e-07!15;CL:0000066!6.18e-07!25;CL:0000839!7.51e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.98e-23,97;CL:0000723,2.59e-20,91;CL:0000048,2.59e-20,91;CL:0000988,7.24e-17,32;CL:0002032,7.24e-17,32;CL:0000037,7.24e-17,32;CL:0000837,7.24e-17,32;CL:0002320,9.14e-17,46;CL:0000134,9.14e-17,46;CL:0000219,4.70e-16,54;CL:0002031,6.89e-14,25;CL:0000738,7.68e-10,17;CL:0002087,7.68e-10,17;CL:0000049,2.05e-09,19;CL:0000542,1.23e-08,13;CL:0000051,1.23e-08,13;CL:0000838,2.00e-08,12;CL:0000084,9.97e-08,11;CL:0000827,9.97e-08,11;CL:0000763,1.00e-07,16;CL:0002321,1.79e-07,70;CL:0000791,2.71e-07,9;CL:0000789,2.71e-07,9;CL:0002420,2.71e-07,9;CL:0002419,2.71e-07,9;CL:0000790,2.71e-07,9;CL:0002076,3.54e-07,15;CL:0000066,6.18e-07,25;CL:0000839,7.51e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.14e-17!46;UBERON:0002193!6.88e-13!48;UBERON:0002390!7.34e-12!45;UBERON:0003061!7.34e-12!45;UBERON:0002371!2.39e-07!16;UBERON:0002405!7.29e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.14e-17,46;UBERON:0002193,6.88e-13,48;UBERON:0002405,6.88e-13,48;UBERON:0002390,7.34e-12,45;UBERON:0003061,7.34e-12,45;UBERON:0002371,2.39e-07,16 | |||
|phase1_expression=58.9347757345642,27.9180326111489,37.7649368693315,44.462239062104,41.0734498556005,59.7650208006328,144.839837169226,173.283500058595,246.521052487568,273.153302217766,274.976056970161,161.618394124552,247.898656940386,189.964534456481,20.3196954707554,135.455953883794,119.625081159913,263.726370239487,222.399611308508,255.482570382414,8.50432901510698,19.9574811913779,245.26660200146,144.63315020524,141.545526418444,52.8293406985819,73.2295393470427,62.7021287115937,114.394098512737,60.2352010126234,63.1931955367618,81.2839262028328,36.9038872550742,79.2408405077194,73.9460146563263,102.068072250114,85.751129630195,62.3612129797993,68.7575103180944,75.9109428762007,59.9996117791635,74.4519578604706,72.826552954673,13.3450627054112,15.8148012702443,13.7660064121261,27.3836970521814,21.8025156380447,8.12838876117546,13.6100929351998,17.2183298599196,14.3752564364972,298.988603994886,259.679646840061,240.307066386862,15.6928255981928,11.747871037489,13.4074743992135,19.2200637816618,22.7466121086974,31.691570175309,22.0248945844936,32.014612660001,27.4469413770827,32.6325899647102,28.419204597844,22.4700082888804,22.6688800139717,24.3670588924922,31.3213776929522,28.604194743788,17.1390590642282,20.3199057675484,28.0503930202245,32.9708420302733,36.7687514644008,8.8092704799511,14.5563565417114,20.7368819895929,23.7395317914349,24.7016637726506,23.962015045611,20.1011759280994,29.2636557216474,19.0997809721013,15.0260578591571,18.9354335462807,21.063137378259,110.333063686449,76.8562766286009,96.235010248957,102.390441360785,23.1190253460635,11.3337670243942,7.79731700937203,9.40856462904405,9.12888730856387,13.9752864514007,122.359208167951,184.796597468908,72.2526743454371,112.9273001246,22.9324715735981,21.3320010945999,111.059904038753,118.825776907821,120.314817913518,7.53613606145796,18.125651855302,7.71899123137089,21.8591511725331,15.5277393939192,17.5267777914604,15.6751546174727,12.2292255421133,9.29932775839599,6.42706916109372,8.96516012903452,8.84610551949874,10.5148452465816,11.0420759230197,11.6370060752453,5.59175283654366,12.296793474485,14.2423760633149,10.9846533739694,128.321998345841,191.96887391789,116.269257771854,13.7807388252437,11.8950156732843,18.5968441127039,11.4724051326902,7.92717917724025,13.0906468072523,14.4394724130304,15.6832620329487,11.5698482667387,15.9215337813215,8.20723237957248,23.9421615051375,17.7024620413774,15.48534316326,17.9338733224501,15.4442853073514,22.8042422107033,16.6789069716317,12.9351685369508,20.2633913356872,17.9650776159428,19.3546236580344,18.1932457914887,20.2974491934686,19.5021213252413,16.4625709126355,20.8985980159418,87.7766484141544,173.709837302433,18.7547909601091,10.3562886267751,14.0715635988658,15.4853372856473,8.75955521665278,15.1508458445501,16.0437797402873,14.6496385192757,13.413670069981,10.9759421825139,9.37991144506839,11.1633875573785,7.53939928776458,11.6959989940266,9.66020507280623,9.79706856950714,10.9350773253346,17.6995933292369,3.96502539580558,8.72686869989696,27.5141843190452,21.5980104830208,17.3971072784826,11.0925938542838,12.8979265430025,8.56015317506516,9.01605216934572,10.5407331023367,10.8074139784116,10.3457365461398,8.77338392036041,13.4822911298133,12.752144942607,9.95706366271836,23.7084876191352,23.5351935976041,16.9061603509621,22.1979947351393,18.8133912552597,11.6425461017929,10.7502113111237,7.0852871030209,7.84993639206874,8.26760998276064,9.19003143970162,19.1871871573508,16.7075145846223,20.2375901146368,12.3744674046987,14.7118067448974,16.2960545140109,13.2340223227373,14.9164408633033,11.5315793538994,15.814502718009,11.1642284300551,12.4815069245824,6.31447194867779,7.53469136792031,9.64887042726734,6.46636165583116,20.0860896476714,16.1335326677606,23.424821836976,22.2955735874077,13.2329943379034,13.8065311713888,12.4885534628991,11.3497303756458,11.7376285513851,11.0023790373666,12.1258852889646,13.1240586218081,11.7165737451024,214.123623193767,95.7274003520929,10.3270497333998,16.0043312856745,14.1284519189257,16.2924244363162,16.7213644284209,8.58401152494868,23.9786246756355,18.7410597262386,18.0955654095551,17.9226598464414,19.6062833192507,18.1168979704853,12.1443210502468,22.7959569170823,24.5078422326845,14.1381379225595,11.4971469018698,26.7098405500883,15.4742611385897,15.8371318053634,17.2568679841952,25.2491861601181,26.3021494559333,18.6719028958339,23.0335476447003,14.1420168054207,13.6966995379157,15.9954840970102,12.83390562185,17.0659849285341,4.21674434299995,7.21948802737308,13.9580238359053,22.1475145658512,23.4139217646786,19.2903331528433,16.847322196016,19.0854634834215,21.5559216988778,21.312546438022,9.62154003061212,5.08396970073168,13.2317038832977,14.6748765117917,10.0107944551461,12.002272060703,13.130957840345,15.2651036762907,13.1166376483433,11.4963687246516,17.428829841381,20.0195261924326,23.7048995033231,21.2856356415301,15.9932246433599,21.0475919350001,96.8877050964975,90.828492558054,92.3175825013551,5.72802370809068,17.3984796469624,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| |||
|short_description=p1@Rps9 | |||
}} |
Revision as of 03:37, 5 August 2015
Short description: | p1@Rps9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rps9_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | 0bp_to_ENSMUST00000108623, ENSMUST00000108625, ENSMUST00000128729, ENSMUST00000139818, ENSMUST00000146303, NM_029767, uc009evz.1, uc009ewa.1_5end |
EntrezGene: | 76846 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.98e-23 | 97 |
somatic stem cell | 2.59e-20 | 91 |
multi fate stem cell | 2.59e-20 | 91 |
hematopoietic cell | 7.24e-17 | 32 |
hematopoietic oligopotent progenitor cell | 7.24e-17 | 32 |
hematopoietic stem cell | 7.24e-17 | 32 |
hematopoietic multipotent progenitor cell | 7.24e-17 | 32 |
connective tissue cell | 9.14e-17 | 46 |
mesenchymal cell | 9.14e-17 | 46 |
motile cell | 4.70e-16 | 54 |
hematopoietic lineage restricted progenitor cell | 6.89e-14 | 25 |
leukocyte | 7.68e-10 | 17 |
nongranular leukocyte | 7.68e-10 | 17 |
common myeloid progenitor | 2.05e-09 | 19 |
lymphocyte | 1.23e-08 | 13 |
common lymphoid progenitor | 1.23e-08 | 13 |
lymphoid lineage restricted progenitor cell | 2.00e-08 | 12 |
T cell | 9.97e-08 | 11 |
pro-T cell | 9.97e-08 | 11 |
myeloid cell | 1.00e-07 | 16 |
embryonic cell | 1.79e-07 | 70 |
mature alpha-beta T cell | 2.71e-07 | 9 |
alpha-beta T cell | 2.71e-07 | 9 |
immature T cell | 2.71e-07 | 9 |
mature T cell | 2.71e-07 | 9 |
immature alpha-beta T cell | 2.71e-07 | 9 |
endo-epithelial cell | 3.54e-07 | 15 |
epithelial cell | 6.18e-07 | 25 |
myeloid lineage restricted progenitor cell | 7.51e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.14e-17 | 46 |
hemolymphoid system | 6.88e-13 | 48 |
immune system | 6.88e-13 | 48 |
hematopoietic system | 7.34e-12 | 45 |
blood island | 7.34e-12 | 45 |
bone marrow | 2.39e-07 | 16 |