FFCP PHASE1:Mm9::chr2:3697194..3697210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=806 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:3697194..3697210,+ | |||
|description=CAGE_peak_at_chr2:3697194..3697210,+ | |description=CAGE_peak_at_chr2:3697194..3697210,+ | ||
|id=chr2:3697194..3697210,+ | |id=chr2:3697194..3697210,+ | ||
|ontology_enrichment_celltype=CL:0000988!3.54e-08!32;CL:0002032!3.54e-08!32;CL:0000037!3.54e-08!32;CL:0000566!3.54e-08!32;CL:0000837!3.54e-08!32;CL:0000838!4.58e-08!12;CL:0000084!2.46e-07!11;CL:0000827!2.46e-07!11;CL:0000542!6.45e-07!13;CL:0000051!6.45e-07!13 | |ontology_enrichment_celltype=CL:0000988!3.54e-08!32;CL:0002032!3.54e-08!32;CL:0000037!3.54e-08!32;CL:0000566!3.54e-08!32;CL:0000837!3.54e-08!32;CL:0000838!4.58e-08!12;CL:0000084!2.46e-07!11;CL:0000827!2.46e-07!11;CL:0000542!6.45e-07!13;CL:0000051!6.45e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.25e-19,32;CL:0002032,4.25e-19,32;CL:0000037,4.25e-19,32;CL:0000837,4.25e-19,32;CL:0002320,1.27e-16,46;CL:0000134,1.27e-16,46;CL:0000838,1.55e-15,12;CL:0000219,8.80e-15,54;CL:0000542,3.56e-14,13;CL:0000051,3.56e-14,13;CL:0000791,1.16e-13,9;CL:0000789,1.16e-13,9;CL:0002420,1.16e-13,9;CL:0002419,1.16e-13,9;CL:0000790,1.16e-13,9;CL:0000084,1.66e-13,11;CL:0000827,1.66e-13,11;CL:0000738,1.56e-12,17;CL:0002087,1.56e-12,17;CL:0000624,1.01e-11,8;CL:0002031,6.05e-11,25;CL:0000034,3.17e-10,97;CL:0000893,2.03e-08,6;CL:0002489,2.03e-08,6;CL:0000898,2.03e-08,6;CL:0000809,2.03e-08,6;CL:0000810,2.03e-08,6;CL:0000895,2.03e-08,6;CL:0000808,2.03e-08,6;CL:0000894,2.03e-08,6;CL:0000806,2.03e-08,6;CL:0000807,2.03e-08,6;CL:0000805,2.03e-08,6;CL:0002425,2.03e-08,6;CL:0002436,2.03e-08,6;CL:0002427,2.03e-08,6;CL:0002428,2.03e-08,6;CL:0002429,2.03e-08,6;CL:0002433,2.03e-08,6;CL:0002431,2.03e-08,6;CL:0002432,2.03e-08,6;CL:0000723,2.49e-08,91;CL:0000048,2.49e-08,91;CL:0000068,1.26e-07,3;CL:0002202,1.26e-07,3;CL:0000069,1.26e-07,3;CL:0002632,1.26e-07,3;CL:0002368,1.26e-07,3;CL:0000307,1.26e-07,3;CL:0000377,1.26e-07,3;CL:0000049,2.30e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.13e-08!48;UBERON:0000072!6.46e-08!27;UBERON:0002390!9.19e-08!45;UBERON:0003061!9.19e-08!45;UBERON:0002405!1.76e-07!70;UBERON:0004177!2.78e-07!29;UBERON:0003408!3.60e-07!24;UBERON:0002370!7.32e-07!23;UBERON:0000974!7.32e-07!23;UBERON:0004807!7.32e-07!23;UBERON:0005058!7.32e-07!23;UBERON:0003351!7.32e-07!23;UBERON:0009113!7.32e-07!23;UBERON:0003295!7.32e-07!23;UBERON:0009722!7.32e-07!23;UBERON:0005562!7.32e-07!23;UBERON:0007690!7.32e-07!23;UBERON:0001004!9.87e-07!42 | |ontology_enrichment_uberon=UBERON:0002193!1.13e-08!48;UBERON:0000072!6.46e-08!27;UBERON:0002390!9.19e-08!45;UBERON:0003061!9.19e-08!45;UBERON:0002405!1.76e-07!70;UBERON:0004177!2.78e-07!29;UBERON:0003408!3.60e-07!24;UBERON:0002370!7.32e-07!23;UBERON:0000974!7.32e-07!23;UBERON:0004807!7.32e-07!23;UBERON:0005058!7.32e-07!23;UBERON:0003351!7.32e-07!23;UBERON:0009113!7.32e-07!23;UBERON:0003295!7.32e-07!23;UBERON:0009722!7.32e-07!23;UBERON:0005562!7.32e-07!23;UBERON:0007690!7.32e-07!23;UBERON:0001004!9.87e-07!42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.27e-16,46;UBERON:0003126,1.26e-07,3;UBERON:0001005,1.26e-07,3;UBERON:0007196,1.26e-07,3;UBERON:0001558,1.26e-07,3;UBERON:0000072,6.54e-07,27 | |||
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,2.1950964985068,6.75785866328,4.44722600011788,1.02730780935303,0.558405112967355,1.54080656938085,1.31130603628496,0.666219523631325,0.607425802169478,0,1.41957974411207,1.37114433605739,0.84877930359606,0.17008658030214,0.992909512008853,1.04479915655574,0.639969691173627,0.45881856213434,0,0.430761996159075,0,0.760093677825496,0,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,5.02237956884289,0,3.66466620781659,3.52938892818609,2.73218193983378,4.85510353031154,0,0.202753862439029,0,0,0,0,0.58328969722285,0.279972843250725,1.43752564364972,5.87239121202077,1.45072428402269,4.36921938885203,0.771778308107841,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.810035629990144,0.630974884054146,0.285650984403804,0.441737081903227,0.489963196859816,0.575072826109418,0,0,0,0.307213066512487,0.263772575460388,0.365950574409639,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0,0.151452386666368,0.0755715601067855,0.289864488701678,1.72084775396277,2.03991400112325,1.61910957491345,0,0.448026887097336,0.702222100658759,0.511290967734173,0.519572009205738,0,0,1.28326477414318,0,0,4.32982082022428,3.54703811665138,5.56076889516262,0.79928715803342,1.29468941823586,0,0.693941307064543,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0.884610551949874,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0.628340120440365,0.255457055208591,4.67278985573089,2.39961092397363,4.44745794755726,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0.180062129805349,0.30140963567143,0.0680364991513279,0,0,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,0,0.411564272815887,0,1.40442637462647,2.05878325691772,4.54661599032948,0,0,0,0.23674473558521,0,0.617068451549513,0.232533944750408,0,0.233530684734339,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.411618449517138,0,0,0,0,0,0.605050573870028,0,0.190225626112559,0.474529061544512,0.658795818896044,0.502670417600539,0,0.19496408711912,1.79763881730844,0.432276099749388,0.398282546508734,0.569003702859245,0.571242563048644,1.1270773567308,0.407302655690628,0,0.280543279561274,0.126473074248515,0.885660887877613,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0.50925170356284,0,0.648540907100142,0.549122826376163,4.31304619582064,0.372140947668503,0.936113019343682,0,0.358794827043824,0,0.739012760666419,0,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0.157635144106191,0.664394068946325,0.159454768657487,0.327726629431476,0.518054945597687,0.144649058581512,1.50791283939272,0,0,0,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0.390438744296638,0,0,0.668396022247182,0,0,1.16902343164525,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0.258717367565509,0,0,0,0,0,0.704015124191131,0.42366414172764,0,0.16488625294148,0.484393280087717,0,0.596861720015682,0.164140899745061,0.291480836629851,0,0.512612642393558,0.206386867963223,0.185194527369712,1.13021074202815,0.27338845544205,0.457556346413045,1.35982743995084,3.63873776041511,2.9021994498929,2.86401185404534,0.316335993581135,0,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0.26175594198403,0.388844919875379,0.621339313086926,1.69107881605257,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0.483168241652012,0.576060012515731,0.316011120628178,0.810900861160657,0.616265742988964,1.03936658382236,0.716106782669926,0.39736270956253,0.360586348559907,0.590758108698309,0.403865799792591,0.762068066549998,0.403304740547362,0.779663045918019,1.15454209968395,0.935015217452552,0,0,0.0897138566094757,0.167884616364078,0,0.563047426353546,0.183151624267265,0.428736758158132,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0.31136204275253,0,0.170733605754134,0.486213434136588,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0,0,0.818462086339379,0,0,0.249810577937946,0,0.214871054048298,0,0,0.231867835620421 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|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,2.1950964985068,6.75785866328,4.44722600011788,1.02730780935303,0.558405112967355,1.54080656938085,1.31130603628496,0.666219523631325,0.607425802169478,0,1.41957974411207,1.37114433605739,0.84877930359606,0.17008658030214,0.992909512008853,1.04479915655574,0.639969691173627,0.45881856213434,0,0.430761996159075,0,0.760093677825496,0,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,5.02237956884289,0,3.66466620781659,3.52938892818609,2.73218193983378,4.85510353031154,0,0.202753862439029,0,0,0,0,0.58328969722285,0.279972843250725,1.43752564364972,5.87239121202077,1.45072428402269,4.36921938885203,0.771778308107841,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.810035629990144,0.630974884054146,0.285650984403804,0.441737081903227,0.489963196859816,0.575072826109418,0,0,0,0.307213066512487,0.263772575460388,0.365950574409639,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0,0.151452386666368,0.0755715601067855,0.289864488701678,1.72084775396277,2.03991400112325,1.61910957491345,0,0.448026887097336,0.702222100658759,0.511290967734173,0.519572009205738,0,0,1.28326477414318,0,0,4.32982082022428,3.54703811665138,5.56076889516262,0.79928715803342,1.29468941823586,0,0.693941307064543,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0.884610551949874,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0.628340120440365,0.255457055208591,4.67278985573089,2.39961092397363,4.44745794755726,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0.180062129805349,0.30140963567143,0.0680364991513279,0,0,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,0,0.411564272815887,0,1.40442637462647,2.05878325691772,4.54661599032948,0,0,0,0.23674473558521,0,0.617068451549513,0.232533944750408,0,0.233530684734339,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.411618449517138,0,0,0,0,0,0.605050573870028,0,0.190225626112559,0.474529061544512,0.658795818896044,0.502670417600539,0,0.19496408711912,1.79763881730844,0.432276099749388,0.398282546508734,0.569003702859245,0.571242563048644,1.1270773567308,0.407302655690628,0,0.280543279561274,0.126473074248515,0.885660887877613,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0.50925170356284,0,0.648540907100142,0.549122826376163,4.31304619582064,0.372140947668503,0.936113019343682,0,0.358794827043824,0,0.739012760666419,0,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0.157635144106191,0.664394068946325,0.159454768657487,0.327726629431476,0.518054945597687,0.144649058581512,1.50791283939272,0,0,0,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0.390438744296638,0,0,0.668396022247182,0,0,1.16902343164525,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0.258717367565509,0,0,0,0,0,0.704015124191131,0.42366414172764,0,0.16488625294148,0.484393280087717,0,0.596861720015682,0.164140899745061,0.291480836629851,0,0.512612642393558,0.206386867963223,0.185194527369712,1.13021074202815,0.27338845544205,0.457556346413045,1.35982743995084,3.63873776041511,2.9021994498929,2.86401185404534,0.316335993581135,0,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0.26175594198403,0.388844919875379,0.621339313086926,1.69107881605257,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0.483168241652012,0.576060012515731,0.316011120628178,0.810900861160657,0.616265742988964,1.03936658382236,0.716106782669926,0.39736270956253,0.360586348559907,0.590758108698309,0.403865799792591,0.762068066549998,0.403304740547362,0.779663045918019,1.15454209968395,0.935015217452552,0,0,0.0897138566094757,0.167884616364078,0,0.563047426353546,0.183151624267265,0.428736758158132,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0.31136204275253,0,0.170733605754134,0.486213434136588,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0,0,0.818462086339379,0,0,0.249810577937946,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr2:3697194..3697210,+ | |short_description=p@chr2:3697194..3697210,+ | ||
}} | }} |
Latest revision as of 03:33, 5 August 2015
Short description: | p@chr2:3697194..3697210, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:3697194..3697210, + |
Coexpression cluster: | MCL_coexpression_mm9:806 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.27e-16 | 46 |
trachea | 1.26e-07 | 3 |
respiratory airway | 1.26e-07 | 3 |
tracheobronchial tree | 1.26e-07 | 3 |
lower respiratory tract | 1.26e-07 | 3 |
segment of respiratory tract | 6.54e-07 | 27 |