FFCP PHASE1:Mm9::chr4:142802594..142802631,-: Difference between revisions
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{{FFCP|EntrezGene=110593|HGNC=|MCL_coexpression_id=1946|UniProt=A2A7B5,Q8C2W5|association_with_transcript=0bp_to_ENSMUST00000105778,ENSMUST00000134791,NM_001081355,uc012doh.1,uc012dok.1_5end|description=CAGE_peak_1_at_Prdm2_5end|id=chr4:142802594..142802631,-|ontology_enrichment_celltype=CL:0000117!8.66e-08!23;CL:0000337!8.66e-08!23;CL:0000540!2.30e-07!33;CL:0000047!2.30e-07!33;CL:0000031!2.30e-07!33;CL:0000404!2.30e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,8.66e-08,23;CL:0000337,8.66e-08,23;CL:0000540,2.30e-07,33;CL:0000047,2.30e-07,33;CL:0000031,2.30e-07,33;CL:0000404,2.30e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.11e-12!94;UBERON:0007811!1.06e-10!86;UBERON:0003056!1.84e-07!49;UBERON:0000991!4.91e-07!18;UBERON:0005564!4.91e-07!18;UBERON:0000033!8.91e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.66e-08,64;UBERON:0003075,7.66e-08,64;UBERON:0007284,7.66e-08,64;UBERON:0003056,1.84e-07,49;UBERON:0000991,4.91e-07,18;UBERON:0005564,4.91e-07,18|phase1_expression=9.44878197918284,9.42233600626275,4.54999239389536,5.74682001482977,5.00895729946347,7.72244650794693,5.13947809310157,13.5579489613655,15.4867594366833,14.5120006319636,12.1564757440109,14.5185329371512,13.0112554747716,10.2281870830227,6.32908547449759,4.25198061518635,2.79824751251259,11.0411757875383,14.1227866613911,14.004858509335,21.4309091180696,3.47518329203099,4.4403964153619,3.51983330145495,3.44113921600755,2.8711598205751,6.8921919385452,5.17130958446134,1.71021077510736,4.03248207615889,2.88249663851896,7.62036808151557,5.53558308826113,0,3.75507105676657,3.15845826181135,4.49172583777212,6.69650609179052,4.6880120671428,7.85285615960697,6.47054636834116,6.14740936462601,12.1377588257788,3.52511090331616,4.76471576731718,4.22157529971868,2.34717403304412,3.92445281484804,3.95435128922049,4.6663175777828,4.61955191363696,0,8.89247812106003,12.3311564141929,9.74672017513146,3.8588915405392,4.01146815914259,3.09403255366465,15.1737345644698,13.7537654610729,17.1134478946668,1.69422266034566,6.22506357277798,1.3498495759221,1.97773272513395,1.4209602298922,1.49800055259202,3.07374644257244,17.4198548678242,13.2305819565057,13.4607975264884,5.99867067247988,8.1721360152097,14.0864419097197,16.1978846020819,18.3843757322004,8.8092704799511,11.3641730895817,10.5988507946808,17.5408762681158,16.4677758484337,13.5437476344758,10.6089539620525,8.4414391504752,8.86229837105499,12.0797720044204,12.386336229522,15.6575534493252,3.86203585999239,3.55186332501892,11.0148505706638,10.3250865237766,8.83962733820076,11.3337670243942,14.2950811838487,13.4408066129201,5.47733238513832,4.94247935476367,2.07828803682295,4.94675404314476,5.49289337129054,3.84979432242953,7.64415719119937,0,2.38140145112336,2.02687892380079,1.51657333504435,9.81981365583916,18.9024655062435,7.57054909230606,6.59244241711316,4.87144765299426,7.61031140944993,4.97384713823654,8.81915303517786,6.53466274914312,9.14621380617183,7.80836527367523,1.76922110389975,5.66183974815932,9.27534377533653,3.87900202508178,1.86391761218122,13.1751358655196,15.0801628905688,6.38642638021478,6.35020159881377,1.19980546198682,5.08280908292259,13.1815762676244,10.5225138648284,19.0994615211554,13.5582969749976,11.5071955798649,10.8049783170971,11.356888414743,12.4244023897386,7.71323217782577,4.54900965180614,6.52369753248069,13.4024056251585,10.8053989083732,14.0448461248172,13.1113191517072,14.8999933141408,15.1174189936123,18.3655380137068,10.0894314588216,11.6406716183735,13.9938499324186,16.0115522989193,8.32943783224784,9.73165372289593,8.70630416305416,8.23128545631774,14.7285357445685,1.40442637462647,3.86021860672073,3.40996199274711,6.62802472113606,6.56672967947069,6.12211008967451,7.57583153872673,6.09969118416952,6.63348585415727,5.8133486187602,8.58474884478781,8.17357396570186,8.3925523455875,6.07419617092652,6.64764238276017,6.57899943413995,6.36695334344047,6.1734952629771,8.83217783969334,13.5834088340655,5.61711931072457,5.55346189993443,9.59797127408553,13.237490296045,10.1805294444454,7.86565746031036,6.67134131534611,4.37518940058886,4.74529061544512,3.12928013975621,5.7807098024062,4.97391180102877,6.62877896205008,3.59527763461689,3.8904848977445,6.17337947088538,7.96605184002943,11.1963542357534,12.3978509240388,9.36796108088446,8.53390943537553,9.95928642442524,10.7502113111237,7.23289725100051,7.22194148070324,8.14421281883883,6.81841042300442,7.34118465150814,8.05891879964132,7.42044970870017,7.50582449137461,8.44120059133459,6.3656462945355,6.90470729881945,10.2145192868272,5.21666685057355,14.3768206527355,7.07067800570156,13.1055822708115,9.09283960609602,8.61107584905178,10.1313139486307,10.5309318394965,8.33762211790133,11.8964432802679,7.80827394565865,7.04070744865506,9.38035041674168,9.28370199455454,9.75668239288994,11.0344600874334,10.6303051031412,11.1618338060241,8.1931657357869,9.67035898449015,8.67894351489069,3.01582567878545,2.71952841909355,7.37646409528554,3.8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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:110593 | |||
|HGNC= | |||
|MCL_coexpression_id=1946 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2A7B5,uniprot:Q8C2W5 | |||
|association_with_transcript=0bp_to_ENSMUST00000105778,ENSMUST00000134791,NM_001081355,uc012doh.1,uc012dok.1_5end | |||
|cluster_id=chr4:142802594..142802631,- | |||
|description=CAGE_peak_1_at_Prdm2_5end | |||
|id=chr4:142802594..142802631,- | |||
|ontology_enrichment_celltype=CL:0000117!8.66e-08!23;CL:0000337!8.66e-08!23;CL:0000540!2.30e-07!33;CL:0000047!2.30e-07!33;CL:0000031!2.30e-07!33;CL:0000404!2.30e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.66e-08,23;CL:0000337,8.66e-08,23;CL:0000540,2.30e-07,33;CL:0000047,2.30e-07,33;CL:0000031,2.30e-07,33;CL:0000404,2.30e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.11e-12!94;UBERON:0007811!1.06e-10!86;UBERON:0003056!1.84e-07!49;UBERON:0000991!4.91e-07!18;UBERON:0005564!4.91e-07!18;UBERON:0000033!8.91e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.66e-08,64;UBERON:0003075,7.66e-08,64;UBERON:0007284,7.66e-08,64;UBERON:0003056,1.84e-07,49;UBERON:0000991,4.91e-07,18;UBERON:0005564,4.91e-07,18 | |||
|phase1_expression=9.44878197918284,9.42233600626275,4.54999239389536,5.74682001482977,5.00895729946347,7.72244650794693,5.13947809310157,13.5579489613655,15.4867594366833,14.5120006319636,12.1564757440109,14.5185329371512,13.0112554747716,10.2281870830227,6.32908547449759,4.25198061518635,2.79824751251259,11.0411757875383,14.1227866613911,14.004858509335,21.4309091180696,3.47518329203099,4.4403964153619,3.51983330145495,3.44113921600755,2.8711598205751,6.8921919385452,5.17130958446134,1.71021077510736,4.03248207615889,2.88249663851896,7.62036808151557,5.53558308826113,0,3.75507105676657,3.15845826181135,4.49172583777212,6.69650609179052,4.6880120671428,7.85285615960697,6.47054636834116,6.14740936462601,12.1377588257788,3.52511090331616,4.76471576731718,4.22157529971868,2.34717403304412,3.92445281484804,3.95435128922049,4.6663175777828,4.61955191363696,0,8.89247812106003,12.3311564141929,9.74672017513146,3.8588915405392,4.01146815914259,3.09403255366465,15.1737345644698,13.7537654610729,17.1134478946668,1.69422266034566,6.22506357277798,1.3498495759221,1.97773272513395,1.4209602298922,1.49800055259202,3.07374644257244,17.4198548678242,13.2305819565057,13.4607975264884,5.99867067247988,8.1721360152097,14.0864419097197,16.1978846020819,18.3843757322004,8.8092704799511,11.3641730895817,10.5988507946808,17.5408762681158,16.4677758484337,13.5437476344758,10.6089539620525,8.4414391504752,8.86229837105499,12.0797720044204,12.386336229522,15.6575534493252,3.86203585999239,3.55186332501892,11.0148505706638,10.3250865237766,8.83962733820076,11.3337670243942,14.2950811838487,13.4408066129201,5.47733238513832,4.94247935476367,2.07828803682295,4.94675404314476,5.49289337129054,3.84979432242953,7.64415719119937,0,2.38140145112336,2.02687892380079,1.51657333504435,9.81981365583916,18.9024655062435,7.57054909230606,6.59244241711316,4.87144765299426,7.61031140944993,4.97384713823654,8.81915303517786,6.53466274914312,9.14621380617183,7.80836527367523,1.76922110389975,5.66183974815932,9.27534377533653,3.87900202508178,1.86391761218122,13.1751358655196,15.0801628905688,6.38642638021478,6.35020159881377,1.19980546198682,5.08280908292259,13.1815762676244,10.5225138648284,19.0994615211554,13.5582969749976,11.5071955798649,10.8049783170971,11.356888414743,12.4244023897386,7.71323217782577,4.54900965180614,6.52369753248069,13.4024056251585,10.8053989083732,14.0448461248172,13.1113191517072,14.8999933141408,15.1174189936123,18.3655380137068,10.0894314588216,11.6406716183735,13.9938499324186,16.0115522989193,8.32943783224784,9.73165372289593,8.70630416305416,8.23128545631774,14.7285357445685,1.40442637462647,3.86021860672073,3.40996199274711,6.62802472113606,6.56672967947069,6.12211008967451,7.57583153872673,6.09969118416952,6.63348585415727,5.8133486187602,8.58474884478781,8.17357396570186,8.3925523455875,6.07419617092652,6.64764238276017,6.57899943413995,6.36695334344047,6.1734952629771,8.83217783969334,13.5834088340655,5.61711931072457,5.55346189993443,9.59797127408553,13.237490296045,10.1805294444454,7.86565746031036,6.67134131534611,4.37518940058886,4.74529061544512,3.12928013975621,5.7807098024062,4.97391180102877,6.62877896205008,3.59527763461689,3.8904848977445,6.17337947088538,7.96605184002943,11.1963542357534,12.3978509240388,9.36796108088446,8.53390943537553,9.95928642442524,10.7502113111237,7.23289725100051,7.22194148070324,8.14421281883883,6.81841042300442,7.34118465150814,8.05891879964132,7.42044970870017,7.50582449137461,8.44120059133459,6.3656462945355,6.90470729881945,10.2145192868272,5.21666685057355,14.3768206527355,7.07067800570156,13.1055822708115,9.09283960609602,8.61107584905178,10.1313139486307,10.5309318394965,8.33762211790133,11.8964432802679,7.80827394565865,7.04070744865506,9.38035041674168,9.28370199455454,9.75668239288994,11.0344600874334,10.6303051031412,11.1618338060241,8.1931657357869,9.67035898449015,8.67894351489069,3.01582567878545,2.71952841909355,7.37646409528554,3.86311444826625,8.99083303931635,9.72856998715286,3.60656879828686,7.32165688892682,9.78075480190396,6.63745865304285,10.1248996934415,8.12493913038677,9.13474563737816,10.4738316391868,5.66734982344852,9.64444331107329,14.2303600060748,16.0660658210904,9.9358059645788,11.0400674273698,12.5422958702254,9.56826713240706,3.98235415019888,7.28341908464944,6.95344181018927,6.41257271170054,6.79194353625777,5.84126781093462,9.30341855405596,7.27067458955011,9.62542921638748,8.21695570633122,5.27093042874994,6.18813259489121,8.85142974959849,10.0834212657534,4.91562998374467,7.93047029616891,10.6404140185364,12.3074484145429,7.89835298890181,8.22055362609418,3.98941903708308,6.77862626764225,7.71849393192367,8.90385765883992,8.7190790415789,8.08193194037288,5.84924485615369,5.58079059133208,5.82961673259701,9.82754100655701,6.32222258952055,8.66824845445534,7.9633646768976,4.89757988212197,8.33834789098253,5.49067615695654,5.43930975980337,4.3384950220334,4.28419918793714,5.72802370809068,8.06656783631895,8.53941761932765,8.96444328820951,10.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| |||
|short_description=p1@Prdm2 | |||
}} |
Revision as of 03:03, 5 August 2015
Short description: | p1@Prdm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Prdm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1946 |
Association with transcript: | 0bp_to_ENSMUST00000105778, ENSMUST00000134791, NM_001081355, uc012doh.1, uc012dok.1_5end |
EntrezGene: | 110593 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.66e-08 | 23 |
neuroblast (sensu Vertebrata) | 8.66e-08 | 23 |
neuron | 2.30e-07 | 33 |
neuronal stem cell | 2.30e-07 | 33 |
neuroblast | 2.30e-07 | 33 |
electrically signaling cell | 2.30e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 7.66e-08 | 64 |
neural plate | 7.66e-08 | 64 |
presumptive neural plate | 7.66e-08 | 64 |
pre-chordal neural plate | 1.84e-07 | 49 |
gonad | 4.91e-07 | 18 |
gonad primordium | 4.91e-07 | 18 |