FFCP PHASE1:Mm9::chr1:163806965..163806985,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=226551|HGNC=|UniProt=Q8C341,B2RRF3|association_with_transcript=-173bp_to_ENSMUST00000048377,NM_172645,uc007dft.2_5end|description=CAGE_peak_2_at_AI848100_5end|id=chr1:163806965..163806985,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!3.93e-13!26;UBERON:0000990!3.93e-13!26;UBERON:0003133!3.57e-12!24;UBERON:0000991!3.96e-10!18;UBERON:0005564!3.96e-10!18;UBERON:0003101!8.94e-10!16;UBERON:0000079!8.94e-10!16;UBERON:0004176!1.22e-09!17;UBERON:0009196!1.22e-09!17;UBERON:0009117!1.22e-09!17;UBERON:0002553!1.72e-09!39;UBERON:0003886!2.09e-09!38;UBERON:0003135!3.36e-09!15;UBERON:0002323!6.55e-09!37;UBERON:0004458!6.55e-09!37;UBERON:0000473!1.21e-08!14;UBERON:0000464!1.09e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0005156,3.84e-13,26;UBERON:0000990,3.84e-13,26;UBERON:0003133,3.50e-12,24;UBERON:0000991,3.89e-10,18;UBERON:0005564,3.89e-10,18;UBERON:0003101,8.80e-10,16;UBERON:0000079,8.80e-10,16;UBERON:0004176,1.20e-09,17;UBERON:0009196,1.20e-09,17;UBERON:0009117,1.20e-09,17;UBERON:0002553,1.91e-09,39;UBERON:0003886,2.32e-09,38;UBERON:0003135,3.32e-09,15;UBERON:0002323,7.26e-09,37;UBERON:0004458,7.26e-09,37;UBERON:0000473,1.19e-08,14|phase1_expression=7.52699581392532,5.23463111459042,8.18998630901165,1.51232105653415,6.01074875935617,4.19698179779725,2.33612640595526,3.48632973292256,9.57363310631334,14.2779361056416,1.02730780935303,2.31339261086476,2.9104124088305,2.71003247498892,6.66219523631325,8.09901069559304,9.09430441566591,1.73504190947031,3.01651753932625,1.69755860719212,5.01755411891312,3.07801948722744,2.61199789138935,1.91990907352088,2.2940928106717,4.01962374880514,3.87685796543167,4.09395342103189,0.190023419456374,1.51218077855958,1.55211357458713,1.27006134691926,0,0,1.1554064790051,0.997407872150954,0.408338712524738,20.5080499061085,15.626706890476,12.0410461113974,35.8821207698919,23.2235464885872,16.0218416500281,2.64383317748712,2.53442328048786,3.12029478674859,0.782391344348039,0.436050312760893,0.659058548203415,0.972149495371417,1.81982348112971,1.43752564364972,3.02008690903925,3.62681071005672,1.68046899571232,3.08711323243136,3.15186783932632,4.12537673821954,2.02316460859598,0,3.1691570175309,1.35537812827653,2.66788438833342,0.449949858640699,1.97773272513395,0.7104801149461,1.49800055259202,0.384218305321555,1.8664130215526,0.810035629990144,0.841299845405528,1.71390590642282,1.32521124570968,2.08234358665422,1.43768206527355,0.919218786610021,3.30347642998166,2.042997409363,3.5329502648936,1.31886287730194,1.37231465403614,2.6045668527838,0.837548997004143,2.25105044012672,2.59757021220577,5.59794312399969,2.56269025438385,2.98239113320481,2.72614295999463,2.79614772395106,4.05810284182349,3.44169550792555,3.39985666853875,1.07940638327563,3.24888208723835,0,1.82577746171277,2.55645483867087,1.29893002301434,1.41335829804136,7.88723150749411,2.56652954828636,10.1922095882658,0,1.29894624606728,0.760079596425296,0.505524445014783,2.51204535381932,4.40194402200192,3.56261133755579,3.64319186208885,2.43572382649713,3.92046345335299,2.86373017049983,3.05730638552832,2.51333182659351,6.42706916109372,1.59059292611903,7.96149496754887,3.558870698843,5.30019644304944,5.33362778448744,0,2.04946557908083,1.25668024088073,2.29911349687732,2.99537811264801,2.39961092397363,2.41433431438823,2.24685959107234,4.57500602818627,3.76963056338593,1.73824320192276,1.02286182932132,2.49345653471472,1.29793010454206,10.3876151127323,3.98102305952298,9.35074206204597,4.8401626853889,4.16385417480652,7.12696523743766,4.50155324513373,5.72678307775717,4.89862793889561,3.71529788826064,5.05989312622536,4.65666067330228,1.29340795759705,5.8622884852024,4.92663147659057,5.69908904311695,4.17070873838397,7.3132954969655,5.76189981942242,7.96137067273973,2.1066395619397,2.05878325691772,2.55747149456033,1.44988040774851,2.11073453982987,4.32148947506436,4.26140524053378,3.14822770795846,2.1597395804233,2.32533944750408,2.68273401399619,3.61972561338225,2.96207729844265,2.46251196118643,1.86458261955468,3.21639972335731,1.09775057645525,2.14730270016595,3.15434922846191,1.85228302282712,1.32167513193519,3.70230793328962,4.47905326123991,4.64473343720877,5.41243337552792,3.63030344322017,2.66853652613844,2.09248188723815,3.32170343081158,4.11747386810027,4.02136334080431,5.17286827306992,4.48417400373976,3.59527763461689,1.29682829924817,1.7922714592893,1.70701110857774,4.45569199177942,5.63538678365402,5.90588850751411,4.07300223052014,3.85747009396752,4.7427402843193,2.95220295959204,3.1399745568275,2.71473760627961,0.296452627087149,5.5058884886311,5.50365186316968,5.62155280962134,5.68008339887808,4.3411888755435,4.32863948028414,3.16465751195892,0.810676133875177,4.11842119782122,2.87536413054709,2.97712758134803,1.5601883655728,0.757736633841335,0.717589654087649,1.4473305640901,3.32555742299888,2.84237117655727,3.7481944581666,2.54617628662782,4.69380496577004,6.19773152534718,5.2369600994923,4.48807390072937,5.51723004371669,4.4292937929755,4.9430978283821,4.7520361267564,3.62638461918381,3.03763023021174,1.50791283939272,1.63171705145613,1.96705709207614,2.75936746304733,1.60550589987792,1.17211686592203,2.45902418065013,1.00988370881749,0.631016438832513,0.780877488593277,2.15423397732799,3.10659437338318,3.11918143715352,4.81230102341015,1.61924280669958,2.04579100537918,2.37172666767914,1.28528526568723,4.82596289708113,6.05423052468668,8.95878276444668,5.93892442701128,3.98235415019888,4.37005145078967,2.72091201268276,3.96070667487386,0.885905678642318,3.3817866273832,5.68542244970086,4.36240475373007,3.92147116223193,3.16036757935816,1.05418608574999,2.06271086496374,5.7874732978144,5.40183282093931,1.4229455216103,5.35842587578981,6.7389288784064,5.17269571046005,4.77192159746151,2.13125464380219,7.74416636610244,11.4389318266463,9.70324951441832,8.244312647074,4.03661066739764,7.05661221659424,7.5204576721976,9.52017218521355,2.62332752966866,3.70850604021019,8.03093139749908,5.36605856704379,4.8150577116125,12.0555812483002,5.87785179200408,11.4389086603261,4.58941760983409,7.69732987780119,7.18639863783004,2.86401185404534,4.11236791655476,4.87966721104437,3.88819226958485,3.3454127362315,6.33251434863915,3.9110660451598,3.38879168473877,2.09404753587224,0.90730481304255,4.34937519160848,10.1464728963154,8.52244312450679,7.1147150896552,7.97249872210595,7.36210993823067,10.1373675294467,9.97536528488909,9.89553324814021,13.421996086491,18.1188090619505,18.7219504067613,2.52808896502543,2.43270258348197,4.10843828659309,4.02754551231165,2.8644271306797,1.78813219303138,2.76449533895928,2.36303243479324,2.92802704849628,3.73413352609499,3.2264379243789,2.63136277997332,3.46362629905186,1.05189211963412,2.26730383615211,6.88156455459601,8.16396095146229,8.05846158547577,4.44336066274038,4.129014459926,5.31139710375069,5.57357785605571,21.5676004735206,0,0,1.14579102687879,0.343706364687375,0.685082519770642,0,1.35004500046361,1.80128481289688,0.906284817968409,0,1.764384908931,5.58634822761443,4.78054096111576,6.07766792670735,3.77303692730368,2.5738091183002,3.77819437262746,4.73880631649457,4.1719497246936,4.04315538822076,5.57654459758527,3.39527414494937,4.02658482120494,5.18603734479441,3.96304735793732,2.38146845641537,3.70829843023538,4.62982129112892,4.53294490883637,4.85756436443511,2.74295401908332,4.08194354166476,4.29185141905178,4.21504608233753,4.51725025993587,3.63842813934209,4.57319932181931,4.99832451731901,4.20992752922171,7.85599180320834,4.86403574309114,5.02372860115374,3.6830793885272,4.02835787083512,5.01557188550968,6.49507502638659,3.04111090979031,4.29742108096597,2.67803664896381,4.19123696327079,2.08681052058379|short_description=p2@AI848100}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:226551 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C341,uniprot:B2RRF3 | |||
|association_with_transcript=-173bp_to_ENSMUST00000048377,NM_172645,uc007dft.2_5end | |||
|cluster_id=chr1:163806965..163806985,- | |||
|description=CAGE_peak_2_at_AI848100_5end | |||
|id=chr1:163806965..163806985,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!3.93e-13!26;UBERON:0000990!3.93e-13!26;UBERON:0003133!3.57e-12!24;UBERON:0000991!3.96e-10!18;UBERON:0005564!3.96e-10!18;UBERON:0003101!8.94e-10!16;UBERON:0000079!8.94e-10!16;UBERON:0004176!1.22e-09!17;UBERON:0009196!1.22e-09!17;UBERON:0009117!1.22e-09!17;UBERON:0002553!1.72e-09!39;UBERON:0003886!2.09e-09!38;UBERON:0003135!3.36e-09!15;UBERON:0002323!6.55e-09!37;UBERON:0004458!6.55e-09!37;UBERON:0000473!1.21e-08!14;UBERON:0000464!1.09e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,3.84e-13,26;UBERON:0000990,3.84e-13,26;UBERON:0003133,3.50e-12,24;UBERON:0000991,3.89e-10,18;UBERON:0005564,3.89e-10,18;UBERON:0003101,8.80e-10,16;UBERON:0000079,8.80e-10,16;UBERON:0004176,1.20e-09,17;UBERON:0009196,1.20e-09,17;UBERON:0009117,1.20e-09,17;UBERON:0002553,1.91e-09,39;UBERON:0003886,2.32e-09,38;UBERON:0003135,3.32e-09,15;UBERON:0002323,7.26e-09,37;UBERON:0004458,7.26e-09,37;UBERON:0000473,1.19e-08,14 | |||
|phase1_expression=7.52699581392532,5.23463111459042,8.18998630901165,1.51232105653415,6.01074875935617,4.19698179779725,2.33612640595526,3.48632973292256,9.57363310631334,14.2779361056416,1.02730780935303,2.31339261086476,2.9104124088305,2.71003247498892,6.66219523631325,8.09901069559304,9.09430441566591,1.73504190947031,3.01651753932625,1.69755860719212,5.01755411891312,3.07801948722744,2.61199789138935,1.91990907352088,2.2940928106717,4.01962374880514,3.87685796543167,4.09395342103189,0.190023419456374,1.51218077855958,1.55211357458713,1.27006134691926,0,0,1.1554064790051,0.997407872150954,0.408338712524738,20.5080499061085,15.626706890476,12.0410461113974,35.8821207698919,23.2235464885872,16.0218416500281,2.64383317748712,2.53442328048786,3.12029478674859,0.782391344348039,0.436050312760893,0.659058548203415,0.972149495371417,1.81982348112971,1.43752564364972,3.02008690903925,3.62681071005672,1.68046899571232,3.08711323243136,3.15186783932632,4.12537673821954,2.02316460859598,0,3.1691570175309,1.35537812827653,2.66788438833342,0.449949858640699,1.97773272513395,0.7104801149461,1.49800055259202,0.384218305321555,1.8664130215526,0.810035629990144,0.841299845405528,1.71390590642282,1.32521124570968,2.08234358665422,1.43768206527355,0.919218786610021,3.30347642998166,2.042997409363,3.5329502648936,1.31886287730194,1.37231465403614,2.6045668527838,0.837548997004143,2.25105044012672,2.59757021220577,5.59794312399969,2.56269025438385,2.98239113320481,2.72614295999463,2.79614772395106,4.05810284182349,3.44169550792555,3.39985666853875,1.07940638327563,3.24888208723835,0,1.82577746171277,2.55645483867087,1.29893002301434,1.41335829804136,7.88723150749411,2.56652954828636,10.1922095882658,0,1.29894624606728,0.760079596425296,0.505524445014783,2.51204535381932,4.40194402200192,3.56261133755579,3.64319186208885,2.43572382649713,3.92046345335299,2.86373017049983,3.05730638552832,2.51333182659351,6.42706916109372,1.59059292611903,7.96149496754887,3.558870698843,5.30019644304944,5.33362778448744,0,2.04946557908083,1.25668024088073,2.29911349687732,2.99537811264801,2.39961092397363,2.41433431438823,2.24685959107234,4.57500602818627,3.76963056338593,1.73824320192276,1.02286182932132,2.49345653471472,1.29793010454206,10.3876151127323,3.98102305952298,9.35074206204597,4.8401626853889,4.16385417480652,7.12696523743766,4.50155324513373,5.72678307775717,4.89862793889561,3.71529788826064,5.05989312622536,4.65666067330228,1.29340795759705,5.8622884852024,4.92663147659057,5.69908904311695,4.17070873838397,7.3132954969655,5.76189981942242,7.96137067273973,2.1066395619397,2.05878325691772,2.55747149456033,1.44988040774851,2.11073453982987,4.32148947506436,4.26140524053378,3.14822770795846,2.1597395804233,2.32533944750408,2.68273401399619,3.61972561338225,2.96207729844265,2.46251196118643,1.86458261955468,3.21639972335731,1.09775057645525,2.14730270016595,3.15434922846191,1.85228302282712,1.32167513193519,3.70230793328962,4.47905326123991,4.64473343720877,5.41243337552792,3.63030344322017,2.66853652613844,2.09248188723815,3.32170343081158,4.11747386810027,4.02136334080431,5.17286827306992,4.48417400373976,3.59527763461689,1.29682829924817,1.7922714592893,1.70701110857774,4.45569199177942,5.63538678365402,5.90588850751411,4.07300223052014,3.85747009396752,4.7427402843193,2.95220295959204,3.1399745568275,2.71473760627961,0.296452627087149,5.5058884886311,5.50365186316968,5.62155280962134,5.68008339887808,4.3411888755435,4.32863948028414,3.16465751195892,0.810676133875177,4.11842119782122,2.87536413054709,2.97712758134803,1.5601883655728,0.757736633841335,0.717589654087649,1.4473305640901,3.32555742299888,2.84237117655727,3.7481944581666,2.54617628662782,4.69380496577004,6.19773152534718,5.2369600994923,4.48807390072937,5.51723004371669,4.4292937929755,4.9430978283821,4.7520361267564,3.62638461918381,3.03763023021174,1.50791283939272,1.63171705145613,1.96705709207614,2.75936746304733,1.60550589987792,1.17211686592203,2.45902418065013,1.00988370881749,0.631016438832513,0.780877488593277,2.15423397732799,3.10659437338318,3.11918143715352,4.81230102341015,1.61924280669958,2.04579100537918,2.37172666767914,1.28528526568723,4.82596289708113,6.05423052468668,8.95878276444668,5.93892442701128,3.98235415019888,4.37005145078967,2.72091201268276,3.96070667487386,0.885905678642318,3.3817866273832,5.68542244970086,4.36240475373007,3.92147116223193,3.16036757935816,1.05418608574999,2.06271086496374,5.7874732978144,5.40183282093931,1.4229455216103,5.35842587578981,6.7389288784064,5.17269571046005,4.77192159746151,2.13125464380219,7.74416636610244,11.4389318266463,9.70324951441832,8.244312647074,4.03661066739764,7.05661221659424,7.5204576721976,9.52017218521355,2.62332752966866,3.70850604021019,8.03093139749908,5.36605856704379,4.8150577116125,12.0555812483002,5.87785179200408,11.4389086603261,4.58941760983409,7.69732987780119,7.18639863783004,2.86401185404534,4.11236791655476,4.87966721104437,3.88819226958485,3.3454127362315,6.33251434863915,3.9110660451598,3.38879168473877,2.09404753587224,0.90730481304255,4.34937519160848,10.1464728963154,8.52244312450679,7.1147150896552,7.97249872210595,7.36210993823067,10.1373675294467,9.97536528488909,9.89553324814021,13.421996086491,18.1188090619505,18.7219504067613,2.52808896502543,2.43270258348197,4.10843828659309,4.02754551231165,2.8644271306797,1.78813219303138,2.76449533895928,2.36303243479324,2.92802704849628,3.73413352609499,3.2264379243789,2.63136277997332,3.46362629905186,1.05189211963412,2.26730383615211,6.88156455459601,8.16396095146229,8.05846158547577,4.44336066274038,4.129014459926,5.31139710375069,5.57357785605571,21.5676004735206,0,0,1.14579102687879,0.343706364687375,0.685082519770642,0,1.35004500046361,1.80128481289688,0.906284817968409,0,1.764384908931,5.58634822761443,4.78054096111576,6.07766792670735,3.77303692730368,2.5738091183002,3.77819437262746,4.73880631649457,4.1719497246936,4.04315538822076,5.57654459758527,3.39527414494937,4.02658482120494,5.18603734479441,3.96304735793732,2.38146845641537,3.70829843023538,4.62982129112892,4.53294490883637,4.85756436443511,2.74295401908332,4.08194354166476,4.29185141905178,4.21504608233753,4.51725025993587,3.63842813934209,4.57319932181931,4.99832451731901,4.20992752922171,7.85599180320834,4.86403574309114,5.02372860115374,3.6830793885272,4.02835787083512,5.01557188550968,6.49507502638659,3.04111090979031,4.29742108096597,2.67803664896381,4.19123696327079,2.08681052058379 | |||
|short_description=p2@AI848100 | |||
}} |
Revision as of 02:59, 5 August 2015
Short description: | p2@AI848100 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AI848100_5end |
Coexpression cluster: | NA |
Association with transcript: | -173bp_to_ENSMUST00000048377, NM_172645, uc007dft.2_5end |
EntrezGene: | 226551 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive structure | 3.84e-13 | 26 |
reproductive system | 3.84e-13 | 26 |
reproductive organ | 3.50e-12 | 24 |
gonad | 3.89e-10 | 18 |
gonad primordium | 3.89e-10 | 18 |
male organism | 8.80e-10 | 16 |
male reproductive system | 8.80e-10 | 16 |
external genitalia | 1.20e-09 | 17 |
indifferent external genitalia | 1.20e-09 | 17 |
indifferent gonad | 1.20e-09 | 17 |
anatomical cavity | 1.91e-09 | 39 |
body cavity precursor | 2.32e-09 | 38 |
male reproductive organ | 3.32e-09 | 15 |
body cavity | 7.26e-09 | 37 |
body cavity or lining | 7.26e-09 | 37 |
testis | 1.19e-08 | 14 |