FFCP PHASE1:Mm9::chr15:25294576..25294646,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:25294576..25294646,+ | |||
|description=CAGE_peak_at_chr15:25294576..25294646,+ | |description=CAGE_peak_at_chr15:25294576..25294646,+ | ||
|id=chr15:25294576..25294646,+ | |id=chr15:25294576..25294646,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.27e-15!23;CL:0000337!1.27e-15!23;CL:0002319!8.27e-13!43;CL:0000221!2.30e-12!44;CL:0000133!2.30e-12!44;CL:0000540!4.65e-12!33;CL:0000047!4.65e-12!33;CL:0000031!4.65e-12!33;CL:0000404!4.65e-12!33;CL:0000055!4.11e-11!50;CL:0000393!6.15e-11!39;CL:0000211!6.15e-11!39 | |ontology_enrichment_celltype=CL:0000117!1.27e-15!23;CL:0000337!1.27e-15!23;CL:0002319!8.27e-13!43;CL:0000221!2.30e-12!44;CL:0000133!2.30e-12!44;CL:0000540!4.65e-12!33;CL:0000047!4.65e-12!33;CL:0000031!4.65e-12!33;CL:0000404!4.65e-12!33;CL:0000055!4.11e-11!50;CL:0000393!6.15e-11!39;CL:0000211!6.15e-11!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.07e-16,23;CL:0000337,2.07e-16,23;CL:0002319,7.90e-13,43;CL:0000540,2.52e-12,33;CL:0000047,2.52e-12,33;CL:0000031,2.52e-12,33;CL:0000404,2.52e-12,33;CL:0000221,4.49e-12,44;CL:0000133,4.49e-12,44;CL:0000393,7.29e-11,39;CL:0000211,7.29e-11,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.55e-24!73;UBERON:0005743!2.55e-24!73;UBERON:0000073!1.86e-23!75;UBERON:0001016!1.86e-23!75;UBERON:0002346!2.77e-22!71;UBERON:0003075!2.77e-22!71;UBERON:0007284!2.77e-22!71;UBERON:0004121!6.41e-21!102;UBERON:0000924!6.41e-21!102;UBERON:0006601!6.41e-21!102;UBERON:0003056!1.15e-20!49;UBERON:0001049!1.69e-20!52;UBERON:0005068!1.69e-20!52;UBERON:0006241!1.69e-20!52;UBERON:0007135!1.69e-20!52;UBERON:0000033!1.16e-19!63;UBERON:0000955!1.49e-19!50;UBERON:0006238!1.49e-19!50;UBERON:0002616!3.80e-19!49;UBERON:0002020!1.25e-18!34;UBERON:0003080!1.16e-17!40;UBERON:0002780!2.68e-17!39;UBERON:0001890!2.68e-17!39;UBERON:0006240!2.68e-17!39;UBERON:0002791!3.11e-15!29;UBERON:0003528!3.11e-15!29;UBERON:0001893!3.11e-15!29;UBERON:0000956!3.09e-11!21;UBERON:0001869!3.09e-11!21;UBERON:0000203!3.09e-11!21;UBERON:0007811!3.85e-11!86;UBERON:0000153!9.23e-11!94;UBERON:0002619!7.82e-09!17 | |ontology_enrichment_uberon=UBERON:0001017!2.55e-24!73;UBERON:0005743!2.55e-24!73;UBERON:0000073!1.86e-23!75;UBERON:0001016!1.86e-23!75;UBERON:0002346!2.77e-22!71;UBERON:0003075!2.77e-22!71;UBERON:0007284!2.77e-22!71;UBERON:0004121!6.41e-21!102;UBERON:0000924!6.41e-21!102;UBERON:0006601!6.41e-21!102;UBERON:0003056!1.15e-20!49;UBERON:0001049!1.69e-20!52;UBERON:0005068!1.69e-20!52;UBERON:0006241!1.69e-20!52;UBERON:0007135!1.69e-20!52;UBERON:0000033!1.16e-19!63;UBERON:0000955!1.49e-19!50;UBERON:0006238!1.49e-19!50;UBERON:0002616!3.80e-19!49;UBERON:0002020!1.25e-18!34;UBERON:0003080!1.16e-17!40;UBERON:0002780!2.68e-17!39;UBERON:0001890!2.68e-17!39;UBERON:0006240!2.68e-17!39;UBERON:0002791!3.11e-15!29;UBERON:0003528!3.11e-15!29;UBERON:0001893!3.11e-15!29;UBERON:0000956!3.09e-11!21;UBERON:0001869!3.09e-11!21;UBERON:0000203!3.09e-11!21;UBERON:0007811!3.85e-11!86;UBERON:0000153!9.23e-11!94;UBERON:0002619!7.82e-09!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.00e-25,73;UBERON:0002346,3.53e-24,64;UBERON:0003075,3.53e-24,64;UBERON:0007284,3.53e-24,64;UBERON:0001016,1.54e-23,75;UBERON:0000073,2.88e-23,54;UBERON:0003056,1.90e-21,49;UBERON:0004121,3.54e-21,95;UBERON:0000924,3.54e-21,95;UBERON:0006601,3.54e-21,95;UBERON:0001049,4.75e-21,52;UBERON:0005068,4.75e-21,52;UBERON:0006241,4.75e-21,52;UBERON:0007135,4.75e-21,52;UBERON:0002020,1.37e-19,34;UBERON:0010371,1.89e-19,73;UBERON:0003080,2.83e-18,40;UBERON:0000955,3.38e-18,47;UBERON:0006238,3.38e-18,47;UBERON:0002780,6.87e-18,39;UBERON:0001890,6.87e-18,39;UBERON:0006240,6.87e-18,39;UBERON:0002616,8.86e-18,46;UBERON:0003528,5.32e-16,29;UBERON:0002791,5.32e-16,29;UBERON:0001893,5.32e-16,29;UBERON:0010314,3.13e-13,92;UBERON:0000956,8.87e-12,21;UBERON:0001869,8.87e-12,21;UBERON:0000203,8.87e-12,21;UBERON:0002619,3.05e-09,17;UBERON:0002021,9.89e-07,10;UBERON:0000411,9.89e-07,10;UBERON:0001950,9.89e-07,10 | |||
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| ||
|short_description=p@chr15:25294576..25294646,+ | |short_description=p@chr15:25294576..25294646,+ | ||
}} | }} |
Latest revision as of 02:57, 5 August 2015
Short description: | p@chr15:25294576..25294646, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:25294576..25294646, + |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.07e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.07e-16 | 23 |
neural cell | 7.90e-13 | 43 |
neuron | 2.52e-12 | 33 |
neuronal stem cell | 2.52e-12 | 33 |
neuroblast | 2.52e-12 | 33 |
electrically signaling cell | 2.52e-12 | 33 |
ectodermal cell | 4.49e-12 | 44 |
neurectodermal cell | 4.49e-12 | 44 |
electrically responsive cell | 7.29e-11 | 39 |
electrically active cell | 7.29e-11 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.00e-25 | 73 |
neurectoderm | 3.53e-24 | 64 |
neural plate | 3.53e-24 | 64 |
presumptive neural plate | 3.53e-24 | 64 |
nervous system | 1.54e-23 | 75 |
regional part of nervous system | 2.88e-23 | 54 |
pre-chordal neural plate | 1.90e-21 | 49 |
ectoderm-derived structure | 3.54e-21 | 95 |
ectoderm | 3.54e-21 | 95 |
presumptive ectoderm | 3.54e-21 | 95 |
neural tube | 4.75e-21 | 52 |
neural rod | 4.75e-21 | 52 |
future spinal cord | 4.75e-21 | 52 |
neural keel | 4.75e-21 | 52 |
gray matter | 1.37e-19 | 34 |
ecto-epithelium | 1.89e-19 | 73 |
anterior neural tube | 2.83e-18 | 40 |
brain | 3.38e-18 | 47 |
future brain | 3.38e-18 | 47 |
regional part of forebrain | 6.87e-18 | 39 |
forebrain | 6.87e-18 | 39 |
future forebrain | 6.87e-18 | 39 |
regional part of brain | 8.86e-18 | 46 |
brain grey matter | 5.32e-16 | 29 |
regional part of telencephalon | 5.32e-16 | 29 |
telencephalon | 5.32e-16 | 29 |
structure with developmental contribution from neural crest | 3.13e-13 | 92 |
cerebral cortex | 8.87e-12 | 21 |
cerebral hemisphere | 8.87e-12 | 21 |
pallium | 8.87e-12 | 21 |
regional part of cerebral cortex | 3.05e-09 | 17 |
occipital lobe | 9.89e-07 | 10 |
visual cortex | 9.89e-07 | 10 |
neocortex | 9.89e-07 | 10 |