FFCP PHASE1:Mm9::chr10:96980215..96980228,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:96980215..96980228,+ | |||
|description=CAGE_peak_at_chr10:96980215..96980228,+ | |description=CAGE_peak_at_chr10:96980215..96980228,+ | ||
|id=chr10:96980215..96980228,+ | |id=chr10:96980215..96980228,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.56e-11,6;CL:0000187,1.56e-11,6;CL:0000056,1.56e-11,6;CL:0000222,1.00e-09,7;CL:0000355,2.55e-07,9;CL:0000192,8.09e-07,3;CL:0000359,8.09e-07,3;CL:0002539,8.09e-07,3;CL:0000514,8.09e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!6.21e-10!23;UBERON:0001009!6.21e-10!23;UBERON:0000926!4.89e-09!193;UBERON:0004120!4.89e-09!193;UBERON:0006603!4.89e-09!193;UBERON:0003914!1.72e-08!47;UBERON:0004872!3.11e-08!33;UBERON:0007100!1.38e-07!18;UBERON:0000948!1.38e-07!18;UBERON:0005498!1.38e-07!18;UBERON:0004140!1.38e-07!18;UBERON:0009881!1.38e-07!18;UBERON:0004141!1.38e-07!18;UBERON:0003084!1.38e-07!18;UBERON:0007005!1.38e-07!18;UBERON:0004139!1.38e-07!18;UBERON:0004291!1.38e-07!18;UBERON:0005156!2.60e-07!26;UBERON:0000990!2.60e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,1.17e-09,26;UBERON:0000990,1.17e-09,26;UBERON:0003133,4.12e-09,24;UBERON:0004535,2.00e-08,23;UBERON:0001009,2.00e-08,23;UBERON:0000474,2.22e-08,9;UBERON:0004872,2.96e-08,33;UBERON:0000926,1.05e-07,120;UBERON:0004120,1.05e-07,120;UBERON:0006603,1.05e-07,120;UBERON:0001134,2.55e-07,9;UBERON:0002036,2.55e-07,9;UBERON:0002385,2.55e-07,9;UBERON:0000486,2.55e-07,9;UBERON:0007503,2.55e-07,9;UBERON:0001015,2.55e-07,9;UBERON:0002329,2.55e-07,9;UBERON:0003082,2.55e-07,9;UBERON:0003059,2.55e-07,9;UBERON:0007282,2.55e-07,9;UBERON:0004290,2.55e-07,9;UBERON:0009618,2.55e-07,9;UBERON:0003134,4.56e-07,8;UBERON:0001135,8.09e-07,3;UBERON:0004237,8.09e-07,3;UBERON:0004695,8.09e-07,3;UBERON:0002111,8.09e-07,3;UBERON:0004178,8.09e-07,3;UBERON:0004176,8.34e-07,17;UBERON:0009196,8.34e-07,17;UBERON:0009117,8.34e-07,17 | |||
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| ||
|short_description=p@chr10:96980215..96980228,+ | |short_description=p@chr10:96980215..96980228,+ | ||
}} | }} |
Latest revision as of 02:19, 5 August 2015
Short description: | p@chr10:96980215..96980228, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:96980215..96980228, + |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.56e-11 | 6 |
muscle cell | 1.56e-11 | 6 |
myoblast | 1.56e-11 | 6 |
mesodermal cell | 1.00e-09 | 7 |
multi-potent skeletal muscle stem cell | 2.55e-07 | 9 |
smooth muscle cell | 8.09e-07 | 3 |
vascular associated smooth muscle cell | 8.09e-07 | 3 |
aortic smooth muscle cell | 8.09e-07 | 3 |
smooth muscle myoblast | 8.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 1.17e-09 | 26 |
reproductive system | 1.17e-09 | 26 |
reproductive organ | 4.12e-09 | 24 |
cardiovascular system | 2.00e-08 | 23 |
circulatory system | 2.00e-08 | 23 |
female reproductive system | 2.22e-08 | 9 |
splanchnic layer of lateral plate mesoderm | 2.96e-08 | 33 |
mesoderm | 1.05e-07 | 120 |
mesoderm-derived structure | 1.05e-07 | 120 |
presumptive mesoderm | 1.05e-07 | 120 |
skeletal muscle tissue | 2.55e-07 | 9 |
striated muscle tissue | 2.55e-07 | 9 |
muscle tissue | 2.55e-07 | 9 |
multilaminar epithelium | 2.55e-07 | 9 |
epithelial vesicle | 2.55e-07 | 9 |
musculature | 2.55e-07 | 9 |
somite | 2.55e-07 | 9 |
myotome | 2.55e-07 | 9 |
presomitic mesoderm | 2.55e-07 | 9 |
presumptive segmental plate | 2.55e-07 | 9 |
dermomyotome | 2.55e-07 | 9 |
trunk paraxial mesoderm | 2.55e-07 | 9 |
female reproductive organ | 4.56e-07 | 8 |
smooth muscle tissue | 8.09e-07 | 3 |
blood vessel smooth muscle | 8.09e-07 | 3 |
arterial system smooth muscle | 8.09e-07 | 3 |
artery smooth muscle tissue | 8.09e-07 | 3 |
aorta smooth muscle tissue | 8.09e-07 | 3 |
external genitalia | 8.34e-07 | 17 |
indifferent external genitalia | 8.34e-07 | 17 |
indifferent gonad | 8.34e-07 | 17 |