FFCP PHASE1:Mm9::chr10:96969187..96969218,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:96969187..96969218,+ | |||
|description=CAGE_peak_at_chr10:96969187..96969218,+ | |description=CAGE_peak_at_chr10:96969187..96969218,+ | ||
|id=chr10:96969187..96969218,+ | |id=chr10:96969187..96969218,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.45e-12,6;CL:0000187,5.45e-12,6;CL:0000056,5.45e-12,6;CL:0000222,4.06e-10,7;CL:0000355,1.26e-07,9;CL:0000192,7.28e-07,3;CL:0000359,7.28e-07,3;CL:0002539,7.28e-07,3;CL:0000514,7.28e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.31e-07!23;UBERON:0001009!1.31e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000383,8.48e-09,10;UBERON:0000947,2.83e-08,4;UBERON:0001637,2.83e-08,4;UBERON:0004573,2.83e-08,4;UBERON:0003509,2.83e-08,4;UBERON:0004571,2.83e-08,4;UBERON:0010191,2.83e-08,4;UBERON:0004572,2.83e-08,4;UBERON:0001134,1.26e-07,9;UBERON:0002036,1.26e-07,9;UBERON:0002385,1.26e-07,9;UBERON:0000486,1.26e-07,9;UBERON:0007503,1.26e-07,9;UBERON:0001015,1.26e-07,9;UBERON:0002329,1.26e-07,9;UBERON:0003082,1.26e-07,9;UBERON:0003059,1.26e-07,9;UBERON:0007282,1.26e-07,9;UBERON:0004290,1.26e-07,9;UBERON:0009618,1.26e-07,9;UBERON:0004535,1.73e-07,23;UBERON:0001009,1.73e-07,23;UBERON:0001135,7.28e-07,3;UBERON:0004237,7.28e-07,3;UBERON:0004695,7.28e-07,3;UBERON:0002111,7.28e-07,3;UBERON:0004178,7.28e-07,3;UBERON:0000474,8.22e-07,9 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,20.6470781479947,21.4919094185371,2.38610777810186,0,0,0,0,0,0,0,0,0,3.60163210450326,2.86533439938757,3.6097046459421,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.883885756421003,0.142371680799103,0,0,0.0755715601067855,0.579728977403356,5.16254326188832,0,0,0.649776417447669,0,0.983110940922263,0,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.742210695324124,0.173485326766136,0.304465478312141,0.461230994512117,0.452167921657868,0.823120949949934,0.376999773989026,0.494389935468748,1.59059292611903,0.884610551949874,0.970601099684455,0.441683036920787,2.42437626567611,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,2.13862664085664,0.248813941220186,0.252722758433675,0.841767423545896,0.130120442962704,0,1.44049703844279,1.9591626318643,0.408218994907967,0.640568601424249,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0.657587197282725,1.11218899690239,0.348252166522167,0.61734640922383,0.995171334092466,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0.232533944750408,0.536546802799238,0.700592054203017,0.658239399653922,1.47750717671186,0.486412857275134,1.16959989940266,1.3173006917463,1.61047702512446,0,0.205809224758569,0,0.264450566663544,0,0.464473343720877,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0.949058123089023,0.164698954724011,0.754005626400808,0.795825888164603,0.58489226135736,0,0.648414149624083,0,0,0.685491075658373,0,0.610953983535943,0.193952487167626,0.210407459670956,0.252946148497029,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0.324270453550071,0.274561413188081,7.18841032636773,0.372140947668503,0.936113019343682,0.505157755894224,0.179397413521912,1.92977408545347,0,0,0.325929952884052,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.478364305972461,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0.551873492609465,0.160550589987792,0,0.819674726883377,1.26235463602186,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.283880170416537,1.6025904330053,1.46598263418218,1.31976098378028,0,0.728341908464944,0,0,0.295301892880773,1.22974059177571,0.516856586336442,0.727067458955011,0.712994756769443,1.26414703174326,1.05418608574999,0,0,0,0.129358683782755,0,1.06404140185364,1.07021290561242,0.493647061806363,0.304464949114599,0.704015124191131,0.847328283455281,0.220528398054962,1.97863503529776,1.29171541356724,0.603129249281559,0.835606408021955,0.656563598980245,0.291480836629851,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.316335993581135,0.406638934253697,0.432021363287205,1.46361807210128,1.09181281873089,1.34864346384821,0.826534557253359,0.523511883968059,0.648074866458964,1.24267862617385,0,0.149516546043979,0.330916980914195,0.388902376688095,1.16243841129958,0.844780627453891,1.17357238645754,0.39061315453185,0.419437377702843,0.241584120826006,0.288030006257865,0.632022241256357,0.810900861160657,0.513554785824136,0,0.179026695667481,0.198681354781265,0,0,0,0,0.302478555410522,0,0.288635524920988,0,1.36038230169127,0,0,0,2.89784391048286,5.63047426353546,2.19781949120718,2.14368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0,0.183843508450014,0.888986911206461,0.206035057238894,0.64183841918363,1.01078884705519,1.01391719956096,0.754505365544305,0.280924522409647,0.704276676453562,0.631790158511746,0,0.231768651889711,1.15745532278223,1.64834360321323,0.588795680537589,2.05721551431249,0.70990322463735,0,0.872078499793971,0.752875043322645,0.846146078916765,1.09756783723664,0.789209134313529,1.35804113845862,1.68342681497322,0.593175090620871,1.0835493061312,1.22769312950907,0.77468420592983,0.192906610981141,0.499621155875892,0.233931608445408,1.93383948643468,1.14772999241306,1.10295709559758,1.15933917810211 | |phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,20.6470781479947,21.4919094185371,2.38610777810186,0,0,0,0,0,0,0,0,0,3.60163210450326,2.86533439938757,3.6097046459421,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.883885756421003,0.142371680799103,0,0,0.0755715601067855,0.579728977403356,5.16254326188832,0,0,0.649776417447669,0,0.983110940922263,0,0,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.742210695324124,0.173485326766136,0.304465478312141,0.461230994512117,0.452167921657868,0.823120949949934,0.376999773989026,0.494389935468748,1.59059292611903,0.884610551949874,0.970601099684455,0.441683036920787,2.42437626567611,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,2.13862664085664,0.248813941220186,0.252722758433675,0.841767423545896,0.130120442962704,0,1.44049703844279,1.9591626318643,0.408218994907967,0.640568601424249,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0.657587197282725,1.11218899690239,0.348252166522167,0.61734640922383,0.995171334092466,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0.232533944750408,0.536546802799238,0.700592054203017,0.658239399653922,1.47750717671186,0.486412857275134,1.16959989940266,1.3173006917463,1.61047702512446,0,0.205809224758569,0,0.264450566663544,0,0.464473343720877,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0.949058123089023,0.164698954724011,0.754005626400808,0.795825888164603,0.58489226135736,0,0.648414149624083,0,0,0.685491075658373,0,0.610953983535943,0.193952487167626,0.210407459670956,0.252946148497029,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0.324270453550071,0.274561413188081,7.18841032636773,0.372140947668503,0.936113019343682,0.505157755894224,0.179397413521912,1.92977408545347,0,0,0.325929952884052,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.478364305972461,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0.551873492609465,0.160550589987792,0,0.819674726883377,1.26235463602186,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.283880170416537,1.6025904330053,1.46598263418218,1.31976098378028,0,0.728341908464944,0,0,0.295301892880773,1.22974059177571,0.516856586336442,0.727067458955011,0.712994756769443,1.26414703174326,1.05418608574999,0,0,0,0.129358683782755,0,1.06404140185364,1.07021290561242,0.493647061806363,0.304464949114599,0.704015124191131,0.847328283455281,0.220528398054962,1.97863503529776,1.29171541356724,0.603129249281559,0.835606408021955,0.656563598980245,0.291480836629851,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.316335993581135,0.406638934253697,0.432021363287205,1.46361807210128,1.09181281873089,1.34864346384821,0.826534557253359,0.523511883968059,0.648074866458964,1.24267862617385,0,0.149516546043979,0.330916980914195,0.388902376688095,1.16243841129958,0.844780627453891,1.17357238645754,0.39061315453185,0.419437377702843,0.241584120826006,0.288030006257865,0.632022241256357,0.810900861160657,0.513554785824136,0,0.179026695667481,0.198681354781265,0,0,0,0,0.302478555410522,0,0.288635524920988,0,1.36038230169127,0,0,0,2.89784391048286,5.63047426353546,2.19781949120718,2.14368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0,0.183843508450014,0.888986911206461,0.206035057238894,0.64183841918363,1.01078884705519,1.01391719956096,0.754505365544305,0.280924522409647,0.704276676453562,0.631790158511746,0,0.231768651889711,1.15745532278223,1.64834360321323,0.588795680537589,2.05721551431249,0.70990322463735,0,0.872078499793971,0.752875043322645,0.846146078916765,1.09756783723664,0.789209134313529,1.35804113845862,1.68342681497322,0.593175090620871,1.0835493061312,1.22769312950907,0.77468420592983,0.192906610981141,0.499621155875892,0.233931608445408,1.93383948643468,1.14772999241306,1.10295709559758,1.15933917810211 | ||
|short_description=p@chr10:96969187..96969218,+ | |short_description=p@chr10:96969187..96969218,+ | ||
}} | }} |
Latest revision as of 02:18, 5 August 2015
Short description: | p@chr10:96969187..96969218, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:96969187..96969218, + |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.45e-12 | 6 |
muscle cell | 5.45e-12 | 6 |
myoblast | 5.45e-12 | 6 |
mesodermal cell | 4.06e-10 | 7 |
multi-potent skeletal muscle stem cell | 1.26e-07 | 9 |
smooth muscle cell | 7.28e-07 | 3 |
vascular associated smooth muscle cell | 7.28e-07 | 3 |
aortic smooth muscle cell | 7.28e-07 | 3 |
smooth muscle myoblast | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculature of body | 8.48e-09 | 10 |
aorta | 2.83e-08 | 4 |
artery | 2.83e-08 | 4 |
systemic artery | 2.83e-08 | 4 |
arterial blood vessel | 2.83e-08 | 4 |
systemic arterial system | 2.83e-08 | 4 |
aortic system | 2.83e-08 | 4 |
arterial system | 2.83e-08 | 4 |
skeletal muscle tissue | 1.26e-07 | 9 |
striated muscle tissue | 1.26e-07 | 9 |
muscle tissue | 1.26e-07 | 9 |
multilaminar epithelium | 1.26e-07 | 9 |
epithelial vesicle | 1.26e-07 | 9 |
musculature | 1.26e-07 | 9 |
somite | 1.26e-07 | 9 |
myotome | 1.26e-07 | 9 |
presomitic mesoderm | 1.26e-07 | 9 |
presumptive segmental plate | 1.26e-07 | 9 |
dermomyotome | 1.26e-07 | 9 |
trunk paraxial mesoderm | 1.26e-07 | 9 |
cardiovascular system | 1.73e-07 | 23 |
circulatory system | 1.73e-07 | 23 |
smooth muscle tissue | 7.28e-07 | 3 |
blood vessel smooth muscle | 7.28e-07 | 3 |
arterial system smooth muscle | 7.28e-07 | 3 |
artery smooth muscle tissue | 7.28e-07 | 3 |
aorta smooth muscle tissue | 7.28e-07 | 3 |
female reproductive system | 8.22e-07 | 9 |