FFCP PHASE1:Mm9::chr2:32643805..32643814,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:32643805..32643814,- | |||
|description=CAGE_peak_at_chr2:32643805..32643814,- | |description=CAGE_peak_at_chr2:32643805..32643814,- | ||
|id=chr2:32643805..32643814,- | |id=chr2:32643805..32643814,- | ||
|ontology_enrichment_celltype=CL:0000117!2.25e-10!23;CL:0000337!2.25e-10!23;CL:0000540!3.21e-08!33;CL:0000047!3.21e-08!33;CL:0000031!3.21e-08!33;CL:0000404!3.21e-08!33;CL:0000393!5.32e-08!39;CL:0000211!5.32e-08!39 | |ontology_enrichment_celltype=CL:0000117!2.25e-10!23;CL:0000337!2.25e-10!23;CL:0000540!3.21e-08!33;CL:0000047!3.21e-08!33;CL:0000031!3.21e-08!33;CL:0000404!3.21e-08!33;CL:0000393!5.32e-08!39;CL:0000211!5.32e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000120,4.93e-14,3;CL:0000117,1.33e-10,23;CL:0000337,1.33e-10,23;CL:0000540,2.01e-07,33;CL:0000047,2.01e-07,33;CL:0000031,2.01e-07,33;CL:0000404,2.01e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.73e-22!71;UBERON:0003075!1.73e-22!71;UBERON:0007284!1.73e-22!71;UBERON:0004121!6.90e-22!102;UBERON:0000924!6.90e-22!102;UBERON:0006601!6.90e-22!102;UBERON:0000033!7.53e-20!63;UBERON:0000073!4.53e-18!75;UBERON:0001016!4.53e-18!75;UBERON:0001017!7.45e-18!73;UBERON:0005743!7.45e-18!73;UBERON:0001049!3.45e-17!52;UBERON:0005068!3.45e-17!52;UBERON:0006241!3.45e-17!52;UBERON:0007135!3.45e-17!52;UBERON:0000955!5.47e-17!50;UBERON:0006238!5.47e-17!50;UBERON:0002020!1.09e-16!34;UBERON:0002616!6.38e-16!49;UBERON:0002791!6.05e-15!29;UBERON:0003528!6.05e-15!29;UBERON:0001893!6.05e-15!29;UBERON:0003056!9.92e-15!49;UBERON:0007811!1.18e-12!86;UBERON:0002021!8.20e-12!10;UBERON:0000411!8.20e-12!10;UBERON:0001950!8.20e-12!10;UBERON:0003080!1.22e-11!40;UBERON:0002780!8.72e-11!39;UBERON:0001890!8.72e-11!39;UBERON:0006240!8.72e-11!39;UBERON:0000153!1.11e-10!94;UBERON:0002298!6.09e-09!6;UBERON:0000956!8.47e-09!21;UBERON:0001869!8.47e-09!21;UBERON:0000203!8.47e-09!21;UBERON:0002420!5.97e-08!8;UBERON:0007245!5.97e-08!8;UBERON:0010009!5.97e-08!8;UBERON:0010011!5.97e-08!8;UBERON:0000454!5.97e-08!8;UBERON:0002619!4.42e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0002020,3.14e-10,34;UBERON:0002021,1.51e-09,10;UBERON:0000411,1.51e-09,10;UBERON:0001950,1.51e-09,10;UBERON:0001049,5.04e-09,52;UBERON:0005068,5.04e-09,52;UBERON:0006241,5.04e-09,52;UBERON:0007135,5.04e-09,52;UBERON:0000073,1.11e-08,54;UBERON:0003528,1.62e-08,29;UBERON:0002791,1.62e-08,29;UBERON:0001893,1.62e-08,29;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0002616,1.30e-07,46;UBERON:0000955,1.90e-07,47;UBERON:0006238,1.90e-07,47;UBERON:0002346,2.77e-07,64;UBERON:0003075,2.77e-07,64;UBERON:0007284,2.77e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0.383062014255563,0.46081959976873,0.263772575460388,0.0914876436024097,1.04182674111352,0.558365998002762,0.56276261003168,1.06958773443767,1.17851434189467,0.569486723196412,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0.292780797011547,8.79676168616511,0,0,0,0,0.449371918214468,0.457500602818626,0,0.347648640384553,0.255715457330331,0,0,0,0,0,0,0.260240885925407,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0.963303539926752,0.586058432961016,0,0,0.315508219416257,0.780877488593277,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0.572895513439397,0.68741272937475,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,0.906284817968409,2.5888015587591,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0.383062014255563,0.46081959976873,0.263772575460388,0.0914876436024097,1.04182674111352,0.558365998002762,0.56276261003168,1.06958773443767,1.17851434189467,0.569486723196412,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0.292780797011547,8.79676168616511,0,0,0,0,0.449371918214468,0.457500602818626,0,0.347648640384553,0.255715457330331,0,0,0,0,0,0,0.260240885925407,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0.963303539926752,0.586058432961016,0,0,0.315508219416257,0.780877488593277,0,0,0,0,0,0,0,0.963963949265421,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0.572895513439397,0.68741272937475,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,0.906284817968409,2.5888015587591,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr2:32643805..32643814,- | |short_description=p@chr2:32643805..32643814,- | ||
}} | }} |
Latest revision as of 01:50, 5 August 2015
Short description: | p@chr2:32643805..32643814, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:32643805..32643814, - |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 4.93e-14 | 3 |
CNS neuron (sensu Vertebrata) | 1.33e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.33e-10 | 23 |
neuron | 2.01e-07 | 33 |
neuronal stem cell | 2.01e-07 | 33 |
neuroblast | 2.01e-07 | 33 |
electrically signaling cell | 2.01e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.45e-10 | 73 |
nervous system | 2.82e-10 | 75 |
gray matter | 3.14e-10 | 34 |
occipital lobe | 1.51e-09 | 10 |
visual cortex | 1.51e-09 | 10 |
neocortex | 1.51e-09 | 10 |
neural tube | 5.04e-09 | 52 |
neural rod | 5.04e-09 | 52 |
future spinal cord | 5.04e-09 | 52 |
neural keel | 5.04e-09 | 52 |
regional part of nervous system | 1.11e-08 | 54 |
brain grey matter | 1.62e-08 | 29 |
regional part of telencephalon | 1.62e-08 | 29 |
telencephalon | 1.62e-08 | 29 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
regional part of brain | 1.30e-07 | 46 |
brain | 1.90e-07 | 47 |
future brain | 1.90e-07 | 47 |
neurectoderm | 2.77e-07 | 64 |
neural plate | 2.77e-07 | 64 |
presumptive neural plate | 2.77e-07 | 64 |