FFCP PHASE1:Mm9::chr12:48913864..48913876,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=81 | |MCL_coexpression_id=81 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:48913864..48913876,+ | |||
|description=CAGE_peak_at_chr12:48913864..48913876,+ | |description=CAGE_peak_at_chr12:48913864..48913876,+ | ||
|id=chr12:48913864..48913876,+ | |id=chr12:48913864..48913876,+ | ||
|ontology_enrichment_celltype=CL:0000063!2.62e-18!66;CL:0000988!2.40e-13!32;CL:0002032!2.40e-13!32;CL:0000037!2.40e-13!32;CL:0000566!2.40e-13!32;CL:0000837!2.40e-13!32;CL:0000144!2.38e-12!121;CL:0000012!2.38e-12!121;CL:0002371!3.37e-11!118;CL:0000219!6.68e-11!54;CL:0002320!7.40e-11!46;CL:0000134!7.40e-11!46;CL:0002031!1.00e-10!25;CL:0000548!2.23e-10!115;CL:0000004!2.23e-10!115;CL:0000255!2.23e-10!115;CL:0000838!5.00e-08!12;CL:0000542!5.62e-08!13;CL:0000051!5.62e-08!13;CL:0000084!2.32e-07!11;CL:0000827!2.32e-07!11;CL:0000034!4.12e-07!97;CL:0000738!4.22e-07!17;CL:0002087!4.22e-07!17;CL:0000049!8.22e-07!19;CL:0000791!9.17e-07!9;CL:0000789!9.17e-07!9;CL:0002420!9.17e-07!9;CL:0002419!9.17e-07!9;CL:0000790!9.17e-07!9 | |ontology_enrichment_celltype=CL:0000063!2.62e-18!66;CL:0000988!2.40e-13!32;CL:0002032!2.40e-13!32;CL:0000037!2.40e-13!32;CL:0000566!2.40e-13!32;CL:0000837!2.40e-13!32;CL:0000144!2.38e-12!121;CL:0000012!2.38e-12!121;CL:0002371!3.37e-11!118;CL:0000219!6.68e-11!54;CL:0002320!7.40e-11!46;CL:0000134!7.40e-11!46;CL:0002031!1.00e-10!25;CL:0000548!2.23e-10!115;CL:0000004!2.23e-10!115;CL:0000255!2.23e-10!115;CL:0000838!5.00e-08!12;CL:0000542!5.62e-08!13;CL:0000051!5.62e-08!13;CL:0000084!2.32e-07!11;CL:0000827!2.32e-07!11;CL:0000034!4.12e-07!97;CL:0000738!4.22e-07!17;CL:0002087!4.22e-07!17;CL:0000049!8.22e-07!19;CL:0000791!9.17e-07!9;CL:0000789!9.17e-07!9;CL:0002420!9.17e-07!9;CL:0002419!9.17e-07!9;CL:0000790!9.17e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.61e-17,32;CL:0002032,2.61e-17,32;CL:0000037,2.61e-17,32;CL:0000837,2.61e-17,32;CL:0000219,2.24e-15,54;CL:0002320,2.69e-15,46;CL:0000134,2.69e-15,46;CL:0002031,1.90e-14,25;CL:0000838,1.62e-10,12;CL:0000542,1.90e-10,13;CL:0000051,1.90e-10,13;CL:0000034,3.01e-10,97;CL:0000738,6.44e-10,17;CL:0002087,6.44e-10,17;CL:0000084,1.34e-09,11;CL:0000827,1.34e-09,11;CL:0000791,8.94e-09,9;CL:0000789,8.94e-09,9;CL:0002420,8.94e-09,9;CL:0002419,8.94e-09,9;CL:0000790,8.94e-09,9;CL:0000066,9.12e-09,25;CL:0002076,1.67e-08,15;CL:0000049,2.36e-08,19;CL:0000624,4.33e-08,8;CL:0000723,1.32e-07,91;CL:0000048,1.32e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.40e-11!46 | |ontology_enrichment_uberon=UBERON:0002384!7.40e-11!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.69e-15,46;UBERON:0000344,9.88e-09,15;UBERON:0000485,3.66e-07,11;UBERON:0001242,3.72e-07,13;UBERON:0001262,3.72e-07,13;UBERON:0004786,3.72e-07,13 | |||
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| ||
|short_description=p@chr12:48913864..48913876,+ | |short_description=p@chr12:48913864..48913876,+ | ||
}} | }} |
Latest revision as of 01:49, 5 August 2015
Short description: | p@chr12:48913864..48913876, + |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:48913864..48913876, + |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.61e-17 | 32 |
hematopoietic oligopotent progenitor cell | 2.61e-17 | 32 |
hematopoietic stem cell | 2.61e-17 | 32 |
hematopoietic multipotent progenitor cell | 2.61e-17 | 32 |
motile cell | 2.24e-15 | 54 |
connective tissue cell | 2.69e-15 | 46 |
mesenchymal cell | 2.69e-15 | 46 |
hematopoietic lineage restricted progenitor cell | 1.90e-14 | 25 |
lymphoid lineage restricted progenitor cell | 1.62e-10 | 12 |
lymphocyte | 1.90e-10 | 13 |
common lymphoid progenitor | 1.90e-10 | 13 |
stem cell | 3.01e-10 | 97 |
leukocyte | 6.44e-10 | 17 |
nongranular leukocyte | 6.44e-10 | 17 |
T cell | 1.34e-09 | 11 |
pro-T cell | 1.34e-09 | 11 |
mature alpha-beta T cell | 8.94e-09 | 9 |
alpha-beta T cell | 8.94e-09 | 9 |
immature T cell | 8.94e-09 | 9 |
mature T cell | 8.94e-09 | 9 |
immature alpha-beta T cell | 8.94e-09 | 9 |
epithelial cell | 9.12e-09 | 25 |
endo-epithelial cell | 1.67e-08 | 15 |
common myeloid progenitor | 2.36e-08 | 19 |
CD4-positive, alpha-beta T cell | 4.33e-08 | 8 |
somatic stem cell | 1.32e-07 | 91 |
multi fate stem cell | 1.32e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.69e-15 | 46 |
mucosa | 9.88e-09 | 15 |
simple columnar epithelium | 3.66e-07 | 11 |
intestinal mucosa | 3.72e-07 | 13 |
wall of intestine | 3.72e-07 | 13 |
gastrointestinal system mucosa | 3.72e-07 | 13 |