FFCP PHASE1:Mm9::chr4:138749194..138749201,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2249 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:138749194..138749201,+ | |||
|description=CAGE_peak_at_chr4:138749194..138749201,+ | |description=CAGE_peak_at_chr4:138749194..138749201,+ | ||
|id=chr4:138749194..138749201,+ | |id=chr4:138749194..138749201,+ | ||
|ontology_enrichment_celltype=CL:0000333!2.30e-23!10;CL:0000095!2.30e-23!10;CL:0000243!2.30e-23!10;CL:0000123!2.30e-23!10;CL:0000125!2.30e-23!10;CL:0000030!2.30e-23!10;CL:0000339!2.30e-23!10;CL:0002453!1.96e-17!8;CL:0000192!1.29e-11!3;CL:0000359!1.29e-11!3;CL:0002539!1.29e-11!3;CL:0000514!1.29e-11!3;CL:0000128!8.17e-11!6;CL:0000126!8.17e-11!6;CL:0000127!8.17e-11!6;CL:0000708!3.35e-09!2;CL:0000864!6.84e-09!2;CL:0000878!6.84e-09!2;CL:0000129!6.84e-09!2;CL:0000055!9.54e-09!50;CL:0002604!1.50e-08!2;CL:0002605!1.50e-08!2;CL:0000219!3.98e-08!54;CL:0000325!1.12e-07!2;CL:0000217!1.12e-07!2;CL:0000328!1.12e-07!2;CL:0002573!1.12e-07!2;CL:0002376!1.12e-07!2;CL:0000218!1.12e-07!2;CL:0000692!1.12e-07!2;CL:0002377!1.12e-07!2;CL:0002375!1.12e-07!2;CL:0000548!1.74e-07!115;CL:0000004!1.74e-07!115;CL:0000255!1.74e-07!115;CL:0002371!3.28e-07!118;CL:0000144!6.02e-07!121;CL:0000012!6.02e-07!121;CL:0002321!9.22e-07!70;CL:0000220!9.22e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,7.52e-44,2;CL:0000151,1.10e-29,3;CL:0000499,1.10e-29,3;CL:0000327,1.10e-29,3;CL:0000128,1.34e-15,6;CL:0000126,1.34e-15,6;CL:0000127,1.34e-15,6;CL:0002603,4.02e-12,2;CL:0002453,5.55e-12,8;CL:0000333,8.44e-10,10;CL:0000095,8.44e-10,10;CL:0000243,8.44e-10,10;CL:0000123,8.44e-10,10;CL:0000125,8.44e-10,10;CL:0000030,8.44e-10,10;CL:0000339,8.44e-10,10;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001135!1.29e-11!3;UBERON:0004237!1.29e-11!3;UBERON:0004695!1.29e-11!3;UBERON:0002111!1.29e-11!3;UBERON:0004178!1.29e-11!3;UBERON:0003210!3.35e-09!2;UBERON:0000947!7.83e-09!4;UBERON:0001637!7.83e-09!4;UBERON:0003509!7.83e-09!4;UBERON:0004573!7.83e-09!4;UBERON:0004571!7.83e-09!4;UBERON:0010191!7.83e-09!4;UBERON:0004572!7.83e-09!4;UBERON:0000055!3.74e-07!5;UBERON:0001981!3.74e-07!5;UBERON:0002049!3.74e-07!5;UBERON:0007500!3.74e-07!5;UBERON:0007798!3.74e-07!5;UBERON:0004537!3.74e-07!5;UBERON:0006965!3.74e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,7.52e-44,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,1.56478268869608,0,0.659058548203415,0.194429899074283,2.79972843250725,0,0,0,0,0,0,0,0,0,0,1.0165335962074,1.77858959222228,0,0,0,0.898800331555214,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,1.56478268869608,0,0.659058548203415,0.194429899074283,2.79972843250725,0,0,0,0,0,0,0,0,0,0,1.0165335962074,1.77858959222228,0,0,0,0.898800331555214,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448569283047378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr4:138749194..138749201,+ | |short_description=p@chr4:138749194..138749201,+ | ||
}} | }} |
Latest revision as of 01:23, 5 August 2015
Short description: | p@chr4:138749194..138749201, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:138749194..138749201, + |
Coexpression cluster: | MCL_coexpression_mm9:2249 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 7.52e-44 | 2 |
secretory cell | 1.10e-29 | 3 |
stromal cell | 1.10e-29 | 3 |
extracellular matrix secreting cell | 1.10e-29 | 3 |
oligodendrocyte | 1.34e-15 | 6 |
macroglial cell | 1.34e-15 | 6 |
astrocyte | 1.34e-15 | 6 |
astrocyte of the cerebellum | 4.02e-12 | 2 |
oligodendrocyte precursor cell | 5.55e-12 | 8 |
migratory neural crest cell | 8.44e-10 | 10 |
neuron associated cell | 8.44e-10 | 10 |
glial cell (sensu Vertebrata) | 8.44e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 8.44e-10 | 10 |
glial cell | 8.44e-10 | 10 |
glioblast | 8.44e-10 | 10 |
glioblast (sensu Vertebrata) | 8.44e-10 | 10 |
motile cell | 2.91e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 7.52e-44 | 2 |