FFCP PHASE1:Mm9::chr2:32178964..32178975,-: Difference between revisions
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|id=chr2:32178964..32178975,-
|short_description=p@chr2:32178964..32178975,-
|description=CAGE_peak_at_chr2:32178964..32178975,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=334 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:32178964..32178975,- | |||
|description=CAGE_peak_at_chr2:32178964..32178975,- | |||
|id=chr2:32178964..32178975,- | |||
|ontology_enrichment_celltype=CL:0000117!1.04e-15!23;CL:0000337!1.04e-15!23;CL:0000540!2.90e-11!33;CL:0000047!2.90e-11!33;CL:0000031!2.90e-11!33;CL:0000404!2.90e-11!33;CL:0000393!6.93e-09!39;CL:0000211!6.93e-09!39;CL:0002319!1.11e-07!43;CL:0000221!2.04e-07!44;CL:0000133!2.04e-07!44;CL:0002608!3.41e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,7.89e-30,3;CL:0002609,1.58e-15,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!7.82e-13!34;UBERON:0001049!1.75e-12!52;UBERON:0005068!1.75e-12!52;UBERON:0006241!1.75e-12!52;UBERON:0007135!1.75e-12!52;UBERON:0001017!2.53e-12!73;UBERON:0005743!2.53e-12!73;UBERON:0000073!8.42e-12!75;UBERON:0001016!8.42e-12!75;UBERON:0002616!2.61e-09!49;UBERON:0000955!5.02e-09!50;UBERON:0006238!5.02e-09!50;UBERON:0002791!9.80e-09!29;UBERON:0003528!9.80e-09!29;UBERON:0001893!9.80e-09!29;UBERON:0003080!1.18e-08!40;UBERON:0004121!3.17e-08!102;UBERON:0000924!3.17e-08!102;UBERON:0006601!3.17e-08!102;UBERON:0002780!7.17e-08!39;UBERON:0001890!7.17e-08!39;UBERON:0006240!7.17e-08!39;UBERON:0002346!1.35e-07!71;UBERON:0003075!1.35e-07!71;UBERON:0007284!1.35e-07!71;UBERON:0000369!9.37e-07!5;UBERON:0002435!9.37e-07!5;UBERON:0000204!9.37e-07!5;UBERON:0010082!9.37e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.79e-13,7;UBERON:0003022,1.79e-13,7;UBERON:0002421,1.79e-13,7;UBERON:0000349,1.79e-13,7;UBERON:0002600,1.79e-13,7;UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002619,2.40e-12,17;UBERON:0002020,4.50e-11,34;UBERON:0000956,3.62e-10,21;UBERON:0001869,3.62e-10,21;UBERON:0000203,3.62e-10,21;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,1.71487118900936,0.958454710182364,2.75765635983006,0,0.127687338085188,0,0.395658863190582,0.457438218012048,0.52091337055676,0,0,0.30559649555362,0,0.427115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,3.5183218591602,0.173824320192276,0.255715457330331,0.20778804455956,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.343706364687375,0.685082519770642,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.499621155875892,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,1.71487118900936,0.958454710182364,2.75765635983006,0,0.127687338085188,0,0.395658863190582,0.457438218012048,0.52091337055676,0,0,0.30559649555362,0,0.427115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,3.5183218591602,0.173824320192276,0.255715457330331,0.20778804455956,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.343706364687375,0.685082519770642,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.499621155875892,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr2:32178964..32178975,- | |||
}} | }} |
Latest revision as of 01:14, 5 August 2015
Short description: | p@chr2:32178964..32178975, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:32178964..32178975, - |
Coexpression cluster: | MCL_coexpression_mm9:334 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 7.89e-30 | 3 |
neuron of cerebral cortex | 1.58e-15 | 6 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.79e-13 | 7 |
lobe parts of cerebral cortex | 1.79e-13 | 7 |
hippocampal formation | 1.79e-13 | 7 |
limbic system | 1.79e-13 | 7 |
limbic lobe | 1.79e-13 | 7 |
brain grey matter | 7.80e-13 | 29 |
regional part of telencephalon | 7.80e-13 | 29 |
telencephalon | 7.80e-13 | 29 |
regional part of cerebral cortex | 2.40e-12 | 17 |
gray matter | 4.50e-11 | 34 |
cerebral cortex | 3.62e-10 | 21 |
cerebral hemisphere | 3.62e-10 | 21 |
pallium | 3.62e-10 | 21 |
regional part of forebrain | 9.26e-10 | 39 |
forebrain | 9.26e-10 | 39 |
future forebrain | 9.26e-10 | 39 |
anterior neural tube | 1.55e-09 | 40 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
pre-chordal neural plate | 6.29e-08 | 49 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |